Seriola dumerili (greater amberjack): 111218339 Help Entry 111218339         CDS       T05606                                  Symbol col4a2 Name (RefSeq) collagen alpha-2(IV) chain   KO K06237   collagen type IV alpha Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu04510   Focal adhesion sdu04512   ECM-receptor interaction sdu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sdu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111218339 (col4a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111218339 (col4a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     111218339 (col4a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sdu04147]     111218339 (col4a2)    00536 Glycosaminoglycan binding proteins [BR:sdu00536]     111218339 (col4a2) Exosome [BR:sdu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    111218339 (col4a2) Glycosaminoglycan binding proteins [BR:sdu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111218339 (col4a2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  111218339 NCBI-ProteinID:  XP_022596320 LinkDB All DBs Position Unknown AA seq 1680 aa AA seqDB search MSGTMQGRHSRRLKNLRLLLLCLSVAILASGVHAGGKKHSGPCGGRDCSGDCKCFPEKGA RGHPGPVGPQGQQGPPGRQGDPGIQGQKGQKGDLGRGGITGPKGNVGMTGVPGFSGNDGI PGHPGQAGPRGKPGADGCNGTHGDAGFPGQTGYNGSPGFPGQPGRKGEKGDSLELSVYME RFRGDPGTPGAHGIFGPPGNPGWPGNQGFPGPKGPPGPPGPRGPKGTMTKVIKGTKGDQG DIGPPGLPGNSTHPLRLSPYGPPGPPGQPGERGLKGETGDPAYNRGETGVMGFPGSRGPP GADGIPGPRGDPGEAGPNGRDGHKGVRGDPGDLISSGSRWPWSSDAGPPGPPGEQGLQGE RGPVGDQGFPGPPGHPASYTQQQVYDFFGPFGIKGEQGEKGQQGEAGMPAVSVGPPGIHG RPGARGPQGPKGTWAEFFKGAPGGRGRPGNAGSKGVKGDHGDCECSTVTSPVGLPGPAGD RGDIGMTGEFGQQGDVGDPGPQGDDGFPGFPGLDGVPGPKGRKGDASVATQKGYSGDPGV SGQDGESGAPGAQGLNGSPGFPGSRGLPGEGPVGDHGDKGFPGFPGRPGVAGLRGEPGAV LGAPKGQRGLPGDDGQAGYHGVPGTPGRPGDCSPTGDGGQVDVTGPCSAIPGPPGIPGLP GPSGLLGFPGPPGQKGQQGPFGVEGEKGETGDQGIGGRPGPPGFAGPRGDLGFPGSKGSF GVPGLPGVPGRHGAQGGKGVHGEVLGASPGARGDPGLPGLQGNKGLSGGQGVPGHPGTIG MPGMIGFKGDSGPAGLQGEEGRPGPAGKYGYPGDPGQAGPPGPHGTIGQPGITGERGTEG DSGPPGPIGLKGIPGAYGNDGVVGEYGSPGNPGQTGADGCPGVPGMKGYKGSPGMSGFEG TRGDLGVKGLSGLRGEPGVPGQFGQKGGTGQSGEKGDRGLRGAPGDKPQIPAQMIVDMKG AKGEQGNIGEQGFTGPRGFKGFPGVPGSEGVHGFPGDPSNEKGHQGDPGAQGLPGIKGMP GLTGNRGITGFQGMSGNKGIKGSPGAYGASGDQGRKGGKGDKGPRIDLPGSTGLRGEEGF QGVPGQTGLIGQTGDRGTIGFDGIGGKKGDSGDQGIFGFPGSDGQNGTPGNQGQKGFPGT PGNQGHPGFPGFPGNKGFPGLKGLYGLHGLKGQKGVPGTPGLDIIGPAGEPGAKGERGES GDPNNQPGVPGTAGLKGFQGPLGDHGQPGPPGFRGPIGPEGTPDRQGPSGDHGFIGVKGY QGFPGPRGFPGVDAPPGEKGISGFNGFPGVPGRKGFKGDQGSFGQRGPNGVSGKKGVKGE QGLMGVPGMIGVKGERGAVGPKGNTGPPGFHGFPGNQGPPPLPLRIPGERGPPGPQGIRG PKGVTGEPGPQGPPGDAGFIGPRGQKGMPGIGGTPGTAGFRGQVGHMGHPGLQGMEGHRG HPGIPGLPGMPGRSVSVGYLLVKHSQSDQTPMCPVGMNKLWNGYSLLYLEGQEKAHNQDL GLAGSCLPRFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVEEGEIKPYISRCS VCEAPSVAIAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFR TTPFIECNGAKGTCHYFANKHSFWLTSIDQSFHTDPASETLKAGQLLSRISRCQVCMKNL NT seq 5043 nt NT seq  +upstreamnt  +downstreamnt atgagtgggaccatgcaaggacgacacagcagaagactgaagaatctgaggctgctgctc ctgtgcctctccgttgccatcctcgcctcaggagtgcacgcaggtgggaagaagcacagt ggcccctgtggagggagagactgcagcggagactgcaaatgtttcccagaaaagggtgcc aggggtcaccctgggccagttggtcctcagggtcaacaggggcctccaggaagacaaggt gatccaggcatccaaggacagaaggggcaaaaaggtgacctcggccgtggtggcatcaca ggtcctaaaggaaatgtgggaatgacaggcgttcctgggttttctggcaacgatggaata cccggccacccaggacaggctgggcccagggggaagccaggtgcagacggatgtaatggg acgcacggagatgcagggttcccaggacaaactggttataatggctcacctggttttcct ggacaaccaggcaggaagggagagaagggagactccctggagctgagtgtgtacatggag cgtttcaggggcgacccaggcacaccaggggcccatggaatatttgggccgccaggaaat ccaggatggccgggtaaccaaggcttcccaggaccaaagggtcccccagggcctccaggt cccagaggaccgaagggcactatgaccaaagtgattaagggaaccaaaggagaccaaggg gacataggaccaccagggctcccaggaaactctactcatccacttagactgtccccctac ggacccccgggacccccgggacaacctggtgaacgaggtctgaagggagaaacgggagat ccggcgtacaacagaggagaaactggtgtaatgggattccccggatcaagggggccacct ggtgctgatgggattcctggaccaaggggggatcctggtgaagcgggaccaaacggcaga gatggacataaaggagtcaggggtgacccaggagatctgatttcatctggaagccgttgg ccttggtcctcagatgctggtcctcctggtccccctggtgagcagggtctacaaggagag aggggcccagtaggagatcaaggcttccctggacccccaggacatcctgcctcttataca cagcaacaagtgtatgacttcttcgggccatttggtataaagggcgagcaaggagagaag ggccaacaaggggaagcagggatgcctgctgtcagtgtaggacccccaggcatccatgga cgcccaggggccaggggccctcaaggacctaaaggaacatgggctgagttcttcaagggg gctccaggcggaagaggaaggcctggaaatgcaggctctaaaggagtgaaaggtgatcat ggagactgtgagtgcagcactgtaacctctccagtgggactacctggccctgccggggat cgtggtgatatagggatgactggagagtttggtcagcagggtgatgtaggagacccaggt ccccaaggagatgatgggttccctggctttcccggactcgatggagtaccaggcccaaaa ggccgaaaaggggatgcaagtgtggccacacagaaaggatattctggagacccaggggtc tccggacaagatggtgagtcaggagcgccaggtgctcaaggcctcaacggttctcctggt ttccctgggagccgaggtcttccaggagaaggtccggtgggagatcatggagacaaaggt ttcccaggttttcctggtcgacccggtgtagctgggctgaggggagaaccaggtgcagtt cttggggcccctaaaggtcagcgtggtttacctggcgatgatggtcaggcaggctatcat ggagttccaggaacacctggcaggccaggcgactgtagtccaacaggagatggaggacag gtggatgtaacaggtccttgcagtgcaattccaggacctcctggaatacctggacttcca ggacccagtggattactaggtttcccaggtcctccagggcaaaaagggcaacagggtcct tttggagtagaaggagagaaaggagaaacaggagatcaaggaataggtggccgtcctgga ccaccaggttttgctggcccccgtggagacctgggatttcctggcagcaaaggttcattt ggagtccctggtttgcccggtgtgcccggcaggcacggggcacaaggtgggaagggtgtt cacggagaagtcttgggagcatcaccaggagcccgtggtgacccagggctgcctgggctt caagggaataaaggcctgtctgggggccaaggagtaccaggccatccaggaacgattggc atgcctggcatgattggcttcaaaggtgacagtggccctgcaggcctgcagggggaggaa ggcaggcctgggccagcgggcaaatatggctaccctggtgaccccggacaagcaggtcca cctgggcctcatggtaccattggacagccaggtatcactggagagaggggaactgaagga gactcgggccctccaggtccaatcggattaaaagggatccctggggcgtacggtaatgat ggtgtcgttggagagtatggctcaccaggtaacccaggacagacaggagcagatggatgc ccaggagtcccaggaatgaaaggatacaaaggatctcccggcatgtcaggttttgagggg accaggggtgatctaggggtgaaaggcctgagtgggctgagaggagaacctggagtgcca ggccaatttggccaaaaaggagggacaggccaaagtggagagaaaggtgatcgtggtctg aggggggcacctggggataagcctcaaatccctgcccagatgattgttgacatgaagggt gccaaaggagagcaaggaaatataggagaacaaggtttcaccgggccgagaggttttaag gggttccccggtgtacccggtagtgagggagttcatggttttcctggagatcccagcaat gagaaaggacaccaaggagatccgggtgcacaggggctgccagggataaaaggaatgcct ggcctaactggaaatcggggaataactggttttcaaggaatgtctggcaacaagggaatc aaaggaagccctggtgcctatggtgcatcaggagaccaaggaagaaagggaggcaaaggt gataaaggccctcgtatagaccttccagggtctacgggattgagaggagaggaggggttt caaggagtgccaggccagacaggattaattggacagactggggacaggggtaccattggt tttgatggtattggagggaaaaagggagattcaggtgatcaaggaatatttggattccca ggctccgatgggcagaacggaactcctggtaaccaaggtcaaaaaggctttcctggaact cctggaaaccaaggacatccaggcttccctggcttcccaggaaacaaaggtttccctggc ctgaagggtctttatggattacatggactgaaaggacaaaagggtgtcccaggaacacca ggtctggatatcattggaccagctggggagcctggagccaaaggagagaggggagagagt ggtgaccccaacaaccagccaggtgttccaggcacagcgggtttgaaaggcttccaagga cctctaggtgaccatggtcaacctgggccaccaggattccgtggccccataggaccagaa gggaccccagacagacaaggacccagtggggaccatggctttataggagttaaagggtac caaggtttccctggacccagaggatttcctggcgtggatgctcccccaggagaaaagggc atatccggatttaacgggtttcctggagttcctggaaggaaaggattcaaaggagatcaa ggttcatttggacagagagggcctaatggtgtttctggaaagaaaggggtaaaaggagag caaggattgatgggagttcctggtatgattggtgtgaaaggagaaagaggagcagttggt ccaaaaggaaacactgggcccccaggttttcatgggtttccaggcaaccagggtcctcct ccacttcccctccgaattccaggagagaggggccctccaggtccacagggtatccgagga ccgaagggggtgacaggggaaccagggccacagggtcccccaggagatgcaggtttcata ggacccaggggacagaagggcatgcctgggattggtggtacaccaggaacagctggattc cgtggacaggtcggacacatgggccaccccggtctgcaaggcatggaaggtcaccgtgga caccctgggatccctgggttacctggtatgcctgggcgcagtgtcagtgtgggctacttg ctggtgaagcacagtcaatcagatcagacgccaatgtgtcctgtgggtatgaataagctg tggaacggctacagtctgctgtacctcgagggccaggaaaaggcccacaaccaggatctc ggtttggctggctcctgcctcccacggttcagcaccatgcccttcctgtactgcaatcct ggagacatttgttactatgccagcagaaacgataagtcctactggttgtcaacaactgct cctcttcccatgatgcctgtagaagagggagagatcaaaccgtacatcagccgctgctca gtatgcgaagctccatcagttgccatcgcagtccacagccaggacatcaccatcccacag tgtcctgtggggtggcgcagcctgtggattggctactcattcctcatgcatacagcagca ggaaatgaaggcggaggtcagtccttgtcatcccctggctcttgcctggaggacttccgc acaacaccgttcatcgagtgcaacggggccaaaggcacatgccactactttgctaacaag cacagcttctggctaacctccatagatcagtcattccacactgacccggcatcagagacg ctcaaagcaggccagctcctgtcccgcatcagccgctgccaggtctgcatgaagaacttg tga

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