Seriola dumerili (greater amberjack): 111218339 Help Entry 111218339         CDS       T05606                                  Symbol col4a2 Name (RefSeq) collagen alpha-2(IV) chain   KO K06237   collagen type IV alpha Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu04382   Cornified envelope formation sdu04510   Focal adhesion sdu04512   ECM-receptor interaction sdu04518   Integrin signaling sdu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sdu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111218339 (col4a2)    04518 Integrin signaling     111218339 (col4a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111218339 (col4a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     111218339 (col4a2)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     111218339 (col4a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sdu04147]     111218339 (col4a2)    00536 Glycosaminoglycan binding proteins [BR:sdu00536]     111218339 (col4a2) Exosome [BR:sdu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    111218339 (col4a2) Glycosaminoglycan binding proteins [BR:sdu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111218339 (col4a2) SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  111218339 NCBI-ProteinID:  XP_022596320 LinkDB All DBs Position Unknown AA seq 1680 aa AA seqDB search MSGTMQGRHSRRLKNLRLLLLCLSVAILASGVHAGGKKHSGPCGGRDCSGDCKCFPEKGA RGHPGPVGPQGQQGPPGRQGDPGIQGQKGQKGDLGRGGITGPKGNVGMTGVPGFSGNDGI PGHPGQAGPRGKPGADGCNGTHGDAGFPGQTGYNGSPGFPGQPGRKGEKGDSLELSVYME RFRGDPGTPGAHGIFGPPGNPGWPGNQGFPGPKGPPGPPGPRGPKGTMTKVIKGTKGDQG DIGPPGLPGNSTHPLRLSPYGPPGPPGQPGERGLKGETGDPAYNRGETGVMGFPGSRGPP GADGIPGPRGDPGEAGPNGRDGHKGVRGDPGDLISSGSRWPWSSDAGPPGPPGEQGLQGE RGPVGDQGFPGPPGHPASYTQQQVYDFFGPFGIKGEQGEKGQQGEAGMPAVSVGPPGIHG RPGARGPQGPKGTWAEFFKGAPGGRGRPGNAGSKGVKGDHGDCECSTVTSPVGLPGPAGD RGDIGMTGEFGQQGDVGDPGPQGDDGFPGFPGLDGVPGPKGRKGDASVATQKGYSGDPGV SGQDGESGAPGAQGLNGSPGFPGSRGLPGEGPVGDHGDKGFPGFPGRPGVAGLRGEPGAV LGAPKGQRGLPGDDGQAGYHGVPGTPGRPGDCSPTGDGGQVDVTGPCSAIPGPPGIPGLP GPSGLLGFPGPPGQKGQQGPFGVEGEKGETGDQGIGGRPGPPGFAGPRGDLGFPGSKGSF GVPGLPGVPGRHGAQGGKGVHGEVLGASPGARGDPGLPGLQGNKGLSGGQGVPGHPGTIG MPGMIGFKGDSGPAGLQGEEGRPGPAGKYGYPGDPGQAGPPGPHGTIGQPGITGERGTEG DSGPPGPIGLKGIPGAYGNDGVVGEYGSPGNPGQTGADGCPGVPGMKGYKGSPGMSGFEG TRGDLGVKGLSGLRGEPGVPGQFGQKGGTGQSGEKGDRGLRGAPGDKPQIPAQMIVDMKG AKGEQGNIGEQGFTGPRGFKGFPGVPGSEGVHGFPGDPSNEKGHQGDPGAQGLPGIKGMP GLTGNRGITGFQGMSGNKGIKGSPGAYGASGDQGRKGGKGDKGPRIDLPGSTGLRGEEGF QGVPGQTGLIGQTGDRGTIGFDGIGGKKGDSGDQGIFGFPGSDGQNGTPGNQGQKGFPGT PGNQGHPGFPGFPGNKGFPGLKGLYGLHGLKGQKGVPGTPGLDIIGPAGEPGAKGERGES GDPNNQPGVPGTAGLKGFQGPLGDHGQPGPPGFRGPIGPEGTPDRQGPSGDHGFIGVKGY QGFPGPRGFPGVDAPPGEKGISGFNGFPGVPGRKGFKGDQGSFGQRGPNGVSGKKGVKGE QGLMGVPGMIGVKGERGAVGPKGNTGPPGFHGFPGNQGPPPLPLRIPGERGPPGPQGIRG PKGVTGEPGPQGPPGDAGFIGPRGQKGMPGIGGTPGTAGFRGQVGHMGHPGLQGMEGHRG HPGIPGLPGMPGRSVSVGYLLVKHSQSDQTPMCPVGMNKLWNGYSLLYLEGQEKAHNQDL GLAGSCLPRFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVEEGEIKPYISRCS VCEAPSVAIAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFR TTPFIECNGAKGTCHYFANKHSFWLTSIDQSFHTDPASETLKAGQLLSRISRCQVCMKNL NT seq 5043 nt NT seq  +upstreamnt  +downstreamnt atgagtgggaccatgcaaggacgacacagcagaagactgaagaatctgaggctgctgctc ctgtgcctctccgttgccatcctcgcctcaggagtgcacgcaggtgggaagaagcacagt ggcccctgtggagggagagactgcagcggagactgcaaatgtttcccagaaaagggtgcc aggggtcaccctgggccagttggtcctcagggtcaacaggggcctccaggaagacaaggt gatccaggcatccaaggacagaaggggcaaaaaggtgacctcggccgtggtggcatcaca ggtcctaaaggaaatgtgggaatgacaggcgttcctgggttttctggcaacgatggaata cccggccacccaggacaggctgggcccagggggaagccaggtgcagacggatgtaatggg acgcacggagatgcagggttcccaggacaaactggttataatggctcacctggttttcct ggacaaccaggcaggaagggagagaagggagactccctggagctgagtgtgtacatggag cgtttcaggggcgacccaggcacaccaggggcccatggaatatttgggccgccaggaaat ccaggatggccgggtaaccaaggcttcccaggaccaaagggtcccccagggcctccaggt cccagaggaccgaagggcactatgaccaaagtgattaagggaaccaaaggagaccaaggg gacataggaccaccagggctcccaggaaactctactcatccacttagactgtccccctac ggacccccgggacccccgggacaacctggtgaacgaggtctgaagggagaaacgggagat ccggcgtacaacagaggagaaactggtgtaatgggattccccggatcaagggggccacct ggtgctgatgggattcctggaccaaggggggatcctggtgaagcgggaccaaacggcaga gatggacataaaggagtcaggggtgacccaggagatctgatttcatctggaagccgttgg ccttggtcctcagatgctggtcctcctggtccccctggtgagcagggtctacaaggagag aggggcccagtaggagatcaaggcttccctggacccccaggacatcctgcctcttataca cagcaacaagtgtatgacttcttcgggccatttggtataaagggcgagcaaggagagaag ggccaacaaggggaagcagggatgcctgctgtcagtgtaggacccccaggcatccatgga cgcccaggggccaggggccctcaaggacctaaaggaacatgggctgagttcttcaagggg gctccaggcggaagaggaaggcctggaaatgcaggctctaaaggagtgaaaggtgatcat ggagactgtgagtgcagcactgtaacctctccagtgggactacctggccctgccggggat cgtggtgatatagggatgactggagagtttggtcagcagggtgatgtaggagacccaggt ccccaaggagatgatgggttccctggctttcccggactcgatggagtaccaggcccaaaa ggccgaaaaggggatgcaagtgtggccacacagaaaggatattctggagacccaggggtc tccggacaagatggtgagtcaggagcgccaggtgctcaaggcctcaacggttctcctggt ttccctgggagccgaggtcttccaggagaaggtccggtgggagatcatggagacaaaggt ttcccaggttttcctggtcgacccggtgtagctgggctgaggggagaaccaggtgcagtt cttggggcccctaaaggtcagcgtggtttacctggcgatgatggtcaggcaggctatcat ggagttccaggaacacctggcaggccaggcgactgtagtccaacaggagatggaggacag gtggatgtaacaggtccttgcagtgcaattccaggacctcctggaatacctggacttcca ggacccagtggattactaggtttcccaggtcctccagggcaaaaagggcaacagggtcct tttggagtagaaggagagaaaggagaaacaggagatcaaggaataggtggccgtcctgga ccaccaggttttgctggcccccgtggagacctgggatttcctggcagcaaaggttcattt ggagtccctggtttgcccggtgtgcccggcaggcacggggcacaaggtgggaagggtgtt cacggagaagtcttgggagcatcaccaggagcccgtggtgacccagggctgcctgggctt caagggaataaaggcctgtctgggggccaaggagtaccaggccatccaggaacgattggc atgcctggcatgattggcttcaaaggtgacagtggccctgcaggcctgcagggggaggaa ggcaggcctgggccagcgggcaaatatggctaccctggtgaccccggacaagcaggtcca cctgggcctcatggtaccattggacagccaggtatcactggagagaggggaactgaagga gactcgggccctccaggtccaatcggattaaaagggatccctggggcgtacggtaatgat ggtgtcgttggagagtatggctcaccaggtaacccaggacagacaggagcagatggatgc ccaggagtcccaggaatgaaaggatacaaaggatctcccggcatgtcaggttttgagggg accaggggtgatctaggggtgaaaggcctgagtgggctgagaggagaacctggagtgcca ggccaatttggccaaaaaggagggacaggccaaagtggagagaaaggtgatcgtggtctg aggggggcacctggggataagcctcaaatccctgcccagatgattgttgacatgaagggt gccaaaggagagcaaggaaatataggagaacaaggtttcaccgggccgagaggttttaag gggttccccggtgtacccggtagtgagggagttcatggttttcctggagatcccagcaat gagaaaggacaccaaggagatccgggtgcacaggggctgccagggataaaaggaatgcct ggcctaactggaaatcggggaataactggttttcaaggaatgtctggcaacaagggaatc aaaggaagccctggtgcctatggtgcatcaggagaccaaggaagaaagggaggcaaaggt gataaaggccctcgtatagaccttccagggtctacgggattgagaggagaggaggggttt caaggagtgccaggccagacaggattaattggacagactggggacaggggtaccattggt tttgatggtattggagggaaaaagggagattcaggtgatcaaggaatatttggattccca ggctccgatgggcagaacggaactcctggtaaccaaggtcaaaaaggctttcctggaact cctggaaaccaaggacatccaggcttccctggcttcccaggaaacaaaggtttccctggc ctgaagggtctttatggattacatggactgaaaggacaaaagggtgtcccaggaacacca ggtctggatatcattggaccagctggggagcctggagccaaaggagagaggggagagagt ggtgaccccaacaaccagccaggtgttccaggcacagcgggtttgaaaggcttccaagga cctctaggtgaccatggtcaacctgggccaccaggattccgtggccccataggaccagaa gggaccccagacagacaaggacccagtggggaccatggctttataggagttaaagggtac caaggtttccctggacccagaggatttcctggcgtggatgctcccccaggagaaaagggc atatccggatttaacgggtttcctggagttcctggaaggaaaggattcaaaggagatcaa ggttcatttggacagagagggcctaatggtgtttctggaaagaaaggggtaaaaggagag caaggattgatgggagttcctggtatgattggtgtgaaaggagaaagaggagcagttggt ccaaaaggaaacactgggcccccaggttttcatgggtttccaggcaaccagggtcctcct ccacttcccctccgaattccaggagagaggggccctccaggtccacagggtatccgagga ccgaagggggtgacaggggaaccagggccacagggtcccccaggagatgcaggtttcata ggacccaggggacagaagggcatgcctgggattggtggtacaccaggaacagctggattc cgtggacaggtcggacacatgggccaccccggtctgcaaggcatggaaggtcaccgtgga caccctgggatccctgggttacctggtatgcctgggcgcagtgtcagtgtgggctacttg ctggtgaagcacagtcaatcagatcagacgccaatgtgtcctgtgggtatgaataagctg tggaacggctacagtctgctgtacctcgagggccaggaaaaggcccacaaccaggatctc ggtttggctggctcctgcctcccacggttcagcaccatgcccttcctgtactgcaatcct ggagacatttgttactatgccagcagaaacgataagtcctactggttgtcaacaactgct cctcttcccatgatgcctgtagaagagggagagatcaaaccgtacatcagccgctgctca gtatgcgaagctccatcagttgccatcgcagtccacagccaggacatcaccatcccacag tgtcctgtggggtggcgcagcctgtggattggctactcattcctcatgcatacagcagca ggaaatgaaggcggaggtcagtccttgtcatcccctggctcttgcctggaggacttccgc acaacaccgttcatcgagtgcaacggggccaaaggcacatgccactactttgctaacaag cacagcttctggctaacctccatagatcagtcattccacactgacccggcatcagagacg ctcaaagcaggccagctcctgtcccgcatcagccgctgccaggtctgcatgaagaacttg tga

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