Seriola dumerili (greater amberjack): 111218380
Help
Entry
111218380 CDS
T05606
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdu03016
]
111218380 (lcmt2)
Enzymes [BR:
sdu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
111218380 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
111218380 (lcmt2)
Transfer RNA biogenesis [BR:
sdu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111218380 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_6
Kelch_1
Kelch_2
RAG2
Motif
Other DBs
NCBI-GeneID:
111218380
NCBI-ProteinID:
XP_022596378
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MPTTNTKKKKQGRDTAVQGTNDSSVVSKVSAAAQGYFHDVFLQHFVCKVSRRAPLINRGY
YVRWRAVDHCVTRFLQITENCPRRQILSLGAGFDSLYFRLHADEELHRAVVFEVDFPDVA
RRKTALITSNITLRGMLDPHLPSPTGPVYVSSGQYRLLGLDIREESQVEEALGAAGLDWA
APTLILSEVVLTYMETQWSDVVICWAAKLLPQSLFVMYEQIRPHDPFGRVMQDHFLKLNS
TLHALRQYPDAAAQTHRFLDKGWEQCVCLDMNDFYLGLVPEEERSRVEVLEPFDEYEEWH
QKCSHYFVLTASRGSFTAQALLTRPAVSPVPSMSPSWSPAALSVKTLPVCMEGLGMASTL
LSPGQVLLTGGSSRGGRGAVTRLLLRGRGGWSSVSVEPSVDLGVRLYHTATPRPGGGVVV
YGGRSSPLNPITSLFRVTLDPCGAPGPGDPEDRDAVRLCAEQMVCTGDPPPPRWRHTATN
VSHKGKDFLFVFGGKNESQAALGDAHFLCLDQQHWTEIPVEGAAPEARHSHSACPYQGGV
VAFGGLDRWGVLLGDTVVLRPTDRGFSWERIEVQPPPVPRYSHSAHVIGEKLVVVGGVWL
HSDGVPGVVVIDLSTRSSVELRLDTTSVPWPLMLHSFCSEPTDLEEPELVLMGGGGNCFS
FGTHVNPRPVTVDLRPALG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgaccaacacgaagaagaagaagcaggggagagacaccgcggtgcagggaacc
aacgacagcagtgtggtgagcaaggtgtctgctgcagcgcagggatacttccacgacgtc
ttcctgcagcactttgtgtgcaaagtgtccagaagagctccgctcatcaacaggggttac
tacgtgcgctggagagccgtggatcactgtgtgacgaggtttctacagatcactgaaaac
tgccccaggaggcagattctgtcgttgggcgccgggttcgactcgttgtattttcgcctg
cacgcagacgaagagcttcacagagctgttgtgttcgaggtggatttcccagatgtcgct
cggcgaaagaccgccctcatcacttctaacatcacactgagggggatgttagacccccat
ttaccttctcctacaggacctgtttacgtgtccagtggtcagtaccgtctgctggggctg
gatatcagagaggagtcccaggtggaggaggctctgggtgcagccgggttggactgggct
gctccgactctaattctctctgaggtggtgctcacctacatggaaacacaatggtcagat
gtcgtcatttgctgggcggcaaagctccttcctcagtctctcttcgtaatgtacgagcag
atccgtccacacgaccccttcggtcgggtcatgcaggatcatttcctgaaactaaactca
accctgcacgccctgcgacagtacccagacgccgccgcacagacacacaggttcctggac
aagggctgggagcagtgtgtgtgtctggacatgaacgacttctacctggggctggtccct
gaggaggagaggagcagagtggaggtcctggagccttttgatgaatatgaggagtggcat
cagaaatgttcccactacttcgtcctcactgcgtctcgaggctccttcacagctcaggcg
ttactcacacgtcctgcagtgtctccggtgccgtccatgagcccgtcgtggagccctgca
gccctgagtgtgaagactctcccagtctgtatggaggggctggggatggcctccaccttg
ctgagtccagggcaggtcctgctaacaggaggctccagcagaggaggcaggggggcagtg
actagactcctcctccgaggccggggaggctggagctccgtcagcgtggagccgtcagta
gatctgggtgtccggctctaccacaccgccacgcctcgtcccggaggaggtgttgtggtc
tacggaggccgctcctctcctctcaacccaatcacaagccttttcagagtaaccctggac
ccctgtggtgcgccgggtcctggagacccggaggacagagatgcagtgagactgtgtgct
gagcagatggtctgtacgggtgacccaccgccgccaagatggaggcacaccgctaccaac
gtcagtcataaagggaaagacttcctgtttgtgtttggtggaaagaatgaatcacaggcc
gctctgggtgacgcccacttcctgtgtcttgaccagcagcactggaccgagatcccagta
gagggtgcagctccagaggcccgccactcgcactcagcctgtccatatcagggaggtgtg
gtggcgttcggaggcctggacagatggggggtcctgttgggggacacggtcgtattaagg
cccacagacagaggcttctcctgggaaaggatagaggtgcagccccctcctgttcccaga
tactctcactctgcccatgtgattggtgagaagctggtggtggtgggcggagtttggctg
cattcagacggcgtgccgggcgtcgtggtgatcgacctcagcacgcggagcagcgtggag
ctcagactggacacgacctcggtgccctggcctctgatgctccactctttctgctcggag
ccgacagacttagaagaacctgagctggtcctgatgggagggggagggaactgtttctcc
ttcgggactcatgtcaaccctcggcccgtcaccgtggacctcagacctgcgctgggatga
DBGET
integrated database retrieval system
