Seriola dumerili (greater amberjack): 111218462
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Entry
111218462 CDS
T05606
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111218462 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111218462 (lmo7)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111218462 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ_6
LIM
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111218462
NCBI-ProteinID:
XP_022596501
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MEWREQSCVSCDEAYLEAQRWIEAVTKKKFGNNDFRSALENGVLLCDLINKIKPGIIKRV
NRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLIT
IYWLGRRAQCDRFYDGPYLNFKAFEGLLGTALYKALQESSGQKDDNVRDSGFGDSWYSER
EELYQLRGGVGGGSGGGHRRDDSLDSLDSLGSRPHSISSDTTLKGSSEGCCSDTEADSVF
RMAENKDGLSYRRSVVITPKASTQFNQFLPTKDKPSGYVPAPLRKKRAERNEDNRRSWAN
PTYTEDEGTLTRQRQIEESIDGSKSTSDIQVDPTVVRQARYEELQKYREQIKDSDDKWQD
DLSKWKSRRRSVNSDIVKKKEEREKIEQITYGGNRRSRTFKDVQEDRETKGRSSIGSRLG
SLSYLDDNEDVFDRPVIAPRTRTLPARSYTVDTPCFSSEPSEPSLKENEPPAASPATGRA
ASPPASREVDSVDSLAGSDTTTTVTRSSLRSSQPPAAAPSQRSPVSEYTTTAKTEETATI
VSASSTRQKVPEPRRPLSGARTEAEAPSSGFLHKQQPQLNSMEAKPPGVSRVSASLPRSY
QRSDSARLTSVVAPRPFGTQPSRITSLPRVISMDDSHKRVNGEVDVSKKTSVPSRYRQFV
TSEDDADSSSAHSSEDEEEEEEESLPQKTAGKSATSAQSVSPAPLPVKSEPPVSPAPAKE
TSQENYCEMRINLNQKPNSSRDFGFRAAWDSTGARVTTIQPGSPAEMCQLQAGDEVLTVN
GHQVAEMSYTDWKSCLEEALQEGSLVMDVRRHGKNNWDRDQPSLPFKSHKTINLTSTDHP
ILLGSSDPNTAKSSLDFTSHISKEALTSKEAPAKPVIDVASNGVNGSFREASVTMRNKES
EPLSLKNLKRRSEFFEQGGSGSSVSALVYLCGGSEPAMPDIPVPSITPSSSRWSWDPEEE
RRRQEKWQKEQERLLQEKYKRDQEKLQEEWLKAQQEIAKNVVPQQPGSLEVNSHIISPQL
PLFPFNQPTSTLWEEEERERKRKEEQERQRQAEEKRRREEEERELQRLQEERKRKERQEE
EERKRREEEELKWQRRREEEREEERRQQEAAEQQRRERERALELQRQQRQWAGSSHGFAN
VQPPLSFTDRAKSKSSPQLDEEEKPQKKVTGGGVGQQSLSHAEQERQQILNEMKKKTPLL
TDSSWIRQRSSNTATSQESDIPSMRRGESLDNLDASYNSWRSSWTPKSNSYVQNYTRPHS
ALSGSTSFYSGGSAAQRPASSTLPSSYSMSSLRGGAGTPSAPWSRQTPSPSLSSPSPTTS
PEPTSEAGGPQQQSRSVSGKKICTFCDTPLGKGAAMIIESLGLCYHLGCFKCIDCKSDLG
GTEAGAEVRIRNKQLFCNSCYMRFKTGQPTAM
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtgaacagtcctgcgtcagctgcgacgaagcctacttggaggcgcagagg
tggattgaggcagtaaccaagaaaaaatttgggaacaacgacttccgatcagcgctggag
aatggcgttctgctgtgtgatctgatcaacaagatcaagcctggtattataaagagggtt
aacaggctgcccacacctattgctggcctggacaaccttaacgtcttcctcaaggcctgc
gggaagctcggactaaaagaagcacagctctttcaccccggagatcttcaggatttatcc
acaagagttacagtcaagcatcaagagaccaacaggaggctgaaaaatgtattgatcacc
atttactggcttggcagaagagctcagtgtgaccgtttctatgatgggccttacctgaac
ttcaaggcatttgagggattattgggcacagcgctatacaaggctctgcaggagtcgtcc
ggtcagaaagacgacaacgtcagagacagcggttttggagacagctggtactcggagaga
gaggagctctaccaactgagaggaggagttggaggaggcagcggcggcggacacaggaga
gacgactccctggacagtttggactctttgggttcccgacctcacagcatctcctctgac
accactctgaaaggcagcagcgagggttgttgcagtgacactgaggcagactctgtcttc
aggatggctgagaacaaggacggtctcagttaccgccgctcggtggtcatcacacccaag
gccagcacccagtttaaccagtttctgcccactaaagacaaaccctcaggctacgtgcct
gctccactaaggaagaaacgggccgaacgcaatgaggacaaccggcgcagctgggccaac
cccacatacacagaggacgaaggcacactcaccagacagcgccaaattgaagagagtatt
gacgggagtaaatcaacaagtgatatccaggtcgaccccaccgtcgtccgtcaggctcgc
tacgaagagctccagaagtaccgcgagcagataaaggacagtgatgataagtggcaggat
gacctgagcaaatggaagagccggcgccggagcgtcaactctgacattgtgaagaagaaa
gaggagcgggagaagatagagcagattacctacggcggtaacagaaggtccaggaccttc
aaggatgtgcaagaggatagagaaactaaaggaagaagcagcattggcagtcgtctggga
tctctctcttacctggacgacaacgaggacgtatttgatagacccgtcattgcccctcgt
acccgaacccttcctgccaggagctacactgttgacactccttgcttttcgtctgaaccc
tctgagccttctctgaaagagaacgaaccccccgccgcttccccggctactggcagggcc
gcttcccctcccgcttcacgggaagttgacagtgtggacagtctcgcaggcagcgacacc
acgaccaccgtcactcgcagctctctccgcagctcccagcctccggcagctgcaccttca
cagaggagtccggtctcagagtacaccacaacagccaagacagaggagaccgcaaccatc
gtctccgcttccagcacccgacaaaaggtgccagagccaaggcgcccattgtcgggcgca
cggactgaggcggaggccccctcctctggttttctgcacaaacaacaaccacagctcaac
tcgatggaagccaagcctcccggggtgtctcgggtttccgcctccctccccaggagctac
cagagatcggatagcgcacgtctaacctcagttgtcgcaccaaggcccttcgggacccag
ccctcccgcatcacctcacttccccgggtcatttcaatggacgactctcacaagcgtgtc
aacggcgaggtcgacgtttctaagaagacatcagtgccgagccgctatcgccagttcgtg
acctctgaggacgatgctgactccagctcggcccacagcagtgaagatgaggaggaggag
gaggaggagtcgctgccgcaaaagacagccgggaagagcgccacctccgctcagagcgtc
tcacctgcccctcttccggtcaagagtgaacctccagtcagtcctgctccagccaaagaa
accagccaggagaactactgtgagatgcggatcaacctgaaccagaagcccaacagcagc
agagactttggcttccgggcagcctgggactcaactggagctcgcgtcacgaccatccag
ccaggcagccccgctgagatgtgccagctccaggccggagacgaggtgctgacagtgaac
gggcaccaggtggcagaaatgagctacacagactggaagtcctgcttggaggaggctcta
caggagggcagcctggtcatggatgttcgccgtcatggcaagaacaactgggacagagat
caaccttccctgccatttaaaagccataagaccatcaatctgaccagtacagatcatccg
atacttctaggttcatctgacccaaacactgcaaaatccagtctggatttcacctcacac
atttccaaggaagcgctgacatccaaagaggcccccgccaagccagtcattgatgtggct
tcaaacggagttaatggaagtttccgtgaggcgtcggtgaccatgaggaacaaagagtca
gaacccctatctttgaaaaacttaaaacggaggtcagagttttttgaacaaggcggctca
gggtccagtgtcagtgcgctggtctacctctgtggaggatcagagcctgcaatgccagat
atacctgttccttcaatcactccctcctccagccgctggtcttgggacccagaggaggag
cgcagaagacaagaaaagtggcagaaggaacaggagcgcctcctacaggagaaatataag
cgtgaccaggagaaactgcaggaggagtggctgaaggctcagcaggagattgccaagaac
gtggtcccacagcagcctgggagcctggaggtgaacagccacatcatcagcccacaattg
cccctctttccattcaaccagcccacttctactctgtgggaagaagaagagagagagaga
aagaggaaggaggagcaggagcgccagaggcaggcggaggagaagaggaggagggaggag
gaggagcgagagttgcagcgtctccaggaggagaggaagaggaaagaaaggcaggaggag
gaagagaggaagaggagggaggaggaagagctgaaatggcagaggaggagagaggaggag
agggaggaggagaggaggcagcaggaggctgcagagcagcagcgcagagagcgggagaga
gccctggagctgcagcggcagcagcgccagtgggctggtagctcccatggctttgccaat
gtccagcctccactgtcctttacagacagggcaaaatccaaatcatctccccagcttgat
gaagaagaaaagcctcagaagaaagtgacgggcggtggagtgggtcagcagtccctgtcg
catgctgagcaggagaggcagcagatcctgaacgagatgaagaagaaaactccactcctg
acggacagcagctggattcgccagcgttcctccaacaccgccaccagccaggagagtgac
ataccatccatgcgccgaggcgagtctcttgacaacttggatgcctcctacaactcctgg
cgctcatcatggacacccaaaagcaactcttatgtccaaaactacacccggcctcactca
gccctctccggcagcacttccttttacagtggcgggtctgcggcccagcggcctgcttcc
tccactctgccctcctcctactccatgagctccctccgtggcggggcgggaactccctcg
gccccctggtcccggcagacaccttccccgtcactctcctctccatcacccaccacctct
ccagagccaacgtctgaggctggtggccctcagcagcagagcaggtcagtgagtggcaag
aaaatctgtacgttctgtgacaccccgctgggaaagggagcggccatgatcatcgagtcc
cttgggctctgttatcatttgggctgttttaagtgtattgactgtaagtctgacctcgga
ggaacggaagcaggggctgaagtcagaatacgaaacaaacagctcttctgtaactcctgc
tacatgcgattcaaaactggccagccaaccgctatgtga
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integrated database retrieval system
