Seriola dumerili (greater amberjack): 111218474
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Entry
111218474 CDS
T05606
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111218474
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111218474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
111218474
NCBI-ProteinID:
XP_022596521
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MDVDEEENMSSSSTDVKENRNLDNVSCKDGLGVAEQLPNGSGLGSRKRPLEEGNNGHTHS
KFRAKKRKKTPGPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQMFEGM
GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETP
AAPEESFYLGSNGSSSLNSLGEYPLPTPPGSNLVQAPLPPPSAFNSPSSGKNPVMILNEL
RPGLKYDFVSESGESHAKNFVMSVTVDAQTFEGSGRNKKLAKARAAQAALSALFNMQLDQ
TPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDV
KEAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYTQLEFFLSNTKEDHQ
KSIFMHCDKGGYRLRDNVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRT
KIESGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPVYF
SSIILGSLYHADHLSRAMYQRIADIEDLPQQFTLNRPLLSGISNAEARQPGKAPNFSVNW
TVGDQALEVINATTGKDDMGRASRLCKHALYSRWVRLHSKLSSILRIKVLKPSSYHEAKQ
AATEYHSAKQALIKAFHKAGLGAWVKKPIEQDQFTLSS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatgaggaggagaatatgagttcgagcagcaccgacgttaaggaaaaccga
aacctggacaacgtgtcctgcaaagacgggctgggagtggctgaacagctccccaatgga
agtggcctgggcagtcgaaagcgccccctagaggagggaaacaatggtcacacacactcc
aagttccgggccaagaagcgcaagaaaaccccagggccagtcctgcccaagaacgctctg
atgcagctgaacgaaatcaaaccgggtctacagtacaaactgctgtctcagacagggcca
gtccatgcaccggtttttgtcatgactgtggaggtcaatggacagatgtttgagggcatg
ggcccaacaaagaagaaggctaaactgaatgcagctgagaaagctctgcgctccttcgtc
cagttccccaatgcctctgaggcacacctggccatgggtcgaacactgacagtgaacaca
gacttcacatctgaccaagctgactttccagatatgctcttcaacggctttgagacacca
gccgcacctgaagaatccttctatctcggctccaatggtagcagctccttaaactcacta
ggggagtacccactgcccacgccacctggcagcaaccttgtccaggccccattgccccct
ccatcggcattcaactcgccctccagtggcaaaaacccagtcatgatcctcaatgagctc
aggccaggcctcaaatatgactttgtctcagagagcggggagagtcatgccaagaatttt
gtgatgtcagtaacggtggatgcacagacgtttgaaggctcagggcgcaacaagaagctg
gctaaagcccgggcagcgcaagccgctctctcagctctcttcaacatgcagctagaccag
acaccatcccggcaacccataccacgagagggtttgcagcttcacctaccccaggttctg
gctgatgccgtctctcgcctggtggtggataagttcagtgagctgacagacaacttcacc
tccccccatgcacgacggaaagtcctagcaggggtcgtcatgacaacagggacagatgtt
aaggaagcacaggtcatttgtgtctccacgggaaccaaatgcatcaacggtgagtacatg
agtgaccgtggcctggcgctcaatgactgccacgctgagataatcgcccggcgctcgctc
atcaggtacctctacactcagctggagttcttcctcagcaacactaaggaggaccaccag
aagtcgatattcatgcactgtgacaaggggggctacaggttaagggacaacgttcagttc
cacctctacatcagcacctcgccctgcggagacgccaggatcttctccccacacgaggcc
ggagtggaagaccaaggagacagacatcctaaccggaaagctcggggccagctaaggacc
aaaattgagtcaggggagggcaccatccccgtgaggtccagtaacacaatccagacctgg
gacggggtgctgcaaggagagaggttactcacaatgtcctgcagtgacaagatcgcaagg
tggaatgtggtgggcatccagggctctttgatgagctacttcacagagccagtctacttc
tccagcatcatcctcggcagcctttaccacgctgaccacctctcccgggccatgtaccag
cgcatcgcagatatcgaggacctgccacagcagttcaccctcaacaggcctttactcagc
ggtataagtaatgcagaggccaggcagccaggcaaggcaccaaacttcagtgtgaactgg
acggtgggcgaccaggccctcgaggtcatcaatgcaaccacaggaaaggacgacatgggc
cgcgcttcacgtctttgcaagcacgccctctacagccgctgggtgcgcctacactcgaag
ctgtcatccatcttgcggatcaaggtgctgaagcccagttcctaccatgaagccaagcag
gcagcgacagagtatcactctgctaagcaggcgctcatcaaggccttccacaaggccggc
ctgggggcgtgggtcaaaaagcccattgagcaagaccagttcaccctcagctcctga
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