Seriola dumerili (greater amberjack): 111218630
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Entry
111218630 CDS
T05606
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
sdu03083
Polycomb repressive complex
sdu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111218630
03083 Polycomb repressive complex
111218630
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
111218630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111218630
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111218630
Histone modification proteins
HAT complexes
HATB complex
111218630
HDAC complexes
Sin3A-HDAC complex
111218630
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111218630
PRC2.2
111218630
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111218630
Heterochromatin formation proteins
Other heterochromatin formation proteins
111218630
Chromatin remodeling factors
NuRD complex
111218630
NuRF complex
111218630
NuRF complex (fruit fly)
111218630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
MIOS_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
111218630
NCBI-ProteinID:
XP_022596745
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVRRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPFIIATKTPTSDVLVFDYTKHPPKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGSGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaggtgtatgacgatgcagtggaggagcgggtcatcaatgaagagtac
aagatctggaagaaaaacacacctttcctgtatgacctagtgatgactcatgcactagag
tggcccagcctgactgtccagtggcttccagatgtccgcaggccagaggggaaggactat
gctgttcacaggctggttctagggacccatacatcagatgagcagaaccacctcgtgatt
gccagtgtccaggtaccgaatgatgatgcccagtttgatgcctcacactatgacagtgag
aaaggagcagagtttggtggattcggttcagtaagcgggaaaatagagatcgagatcaag
ataaaccacgagggggaggtgaaccgagcccgttacatgccccagaatcccttcatcatt
gccaccaagactcccacgtctgacgtgctggtctttgactacactaagcacccgcctaag
ccagatccgagtggggagtgtagtcctgacctgaggctcaaaggtcaccagaaagaagga
tatggtctttcctggaatcccaacctcagcgggaacctcctcagtgcctccgatgaccat
accatctgtttatgggacattgggagcggcccaaaggaagggaagatcgtggatgccaag
accatcttcactggccacacagcagtggtggaggatgtttcctggcatttgctccatgaa
tccctgtttggctctgtggccgacgaccagaaactcatgatatgggacactcgttccaac
aacacatccaaagccagccactcggtggatgctcacactgctgaggtcaattgtctgagc
ttcaacccctacagcgagttcattctggccactggttctgctgataagactgttgcattg
tgggatctaagaaacctgaaactcaagctccactcttttgagtcccataaagatgaaatt
ttccaggtacaatggtctcctcacaatgagacgatcctggcctcgagcggcaccgaccga
cgtctcaacgtctgggatctcagtaaaattggggaggagcagtcagcagaggatgctgag
gatggccctccagagttgctgttcatccacggaggccacacagccaagatctctgacttc
tcctggaaccccaatgagccctggatcatctgctcggtgtccgaggacaacatcatgcaa
gtctggcagatggcggaaaacatctacaatgacgaagagccagataacacccccgcatca
gagctggaggcgcagggatcttaa
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integrated database retrieval system
