Seriola dumerili (greater amberjack): 111218662
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Entry
111218662 CDS
T05606
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111218662
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111218662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF4788
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
111218662
NCBI-ProteinID:
XP_022596790
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MRLSVPIFFLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDAGYGTMERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYV
IEIPENSPPGKVLIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DYEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNSPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREMKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTMYLLQVPENNIPGEYLGSVLAHDPDVGRN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPHMES
TSTVRVNVLDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVATVKAVDHDHGESGHLTY
EITEGNDDHLFEMDPVGGEVRTAHALWEEVAPVVELVVKVTDHGKPPLSAVAKLIIRANT
ETAPGGGSSASGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKETGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRAGCHSSFAGLSTDTPANRMSVIQTENFPSESNYAGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKATAVNGQPFEQE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
SSRKTLSTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSASSSPSKSSMPLDLANHE
SKEEREGGSDSSAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSGLIHSSVISQECGGS
DYVLDPRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgtacccattttctttctgctgtgggttaaagccctgacattgaaaaat
ctcaattattctgtcccggaggagcaaggacctggcactgttataggcaatatagcaaaa
gatgccggatatgggaccatggagagagggaaaaaatctaacttcagagtgctggagaat
tctgcaccacatctggtggacgttgacccggagagtggactaatcttcaccaaacaaagg
attgacagggaaacgttatgcaggcgcaacccaaagtgccagctctctatggaggtgttt
gccaacgacaaggaaatatgcatgatcaagattgatatacaggacatcaatgacaactcg
cccagttttccttcagatcatgttaatattgatatttctgaaaacgcagctgctggcaca
cgcttccctctgactattgcacatgactcagattctggggagaatgggataaagacctat
caggtcacgagagatgattacaataccttttctttggatttaaaagtgaggggtgatggg
actatatatccagagctggtggtccagagacctctggatagagaggatcagagtcatcac
acccttctcctcacagcaattgacggcggggagtatccaagatcaggctccatgcaaatt
aacgtcagagtgactgattccaatgacaatagcccagtttttgaaaaatcttcctatgtg
atcgagattccagagaattcgcctcctgggaaagtacttatagatttgaatgccactgac
caagatgaggggagcaacgggcaggtggtctattccttcactggatatgcatctgagaga
atccaagatttgttctctattgaccccaatactggcgtcatcaaggtccagggagaaatt
gactatgaagagaatccaatcatagagtttgacgtccaggctaaggatctggggcccaac
ccgatcccaggccactgtaaaattactgtgaaagtgcttgacaagaatgacaactcgcca
ataataagttttgtttctgtccggcagggagccatcagtgaggcagcacctccagaatct
gtcatagcactggtcagagtgacagataaagattctggccgtaatggtcaacttcagtgc
cgggtgctgggaaatgtaccgttcagactgcaggaaaacaatgataatttttacacactg
ctcactgacagacctctggacagggaaatgaaagatgaatacaatgtaacaatagtggcg
agagacaatgggatcccttctttgaactacactaagtcgtttactgtgaaaatcttggat
gagaatgacaatgcgccacgctttacaaagactatgtatctgctacaggtgcctgagaac
aacatcccaggggagtatttgggctccgttctggcccacgacccagatgtaggtcgaaat
ggaactgtgtcgtactccattctgccgtcgcatataggagatgtttccgtgtacacctat
gtgtctgttaatcccaccaatggagccatatatgcctcacgctctttcaactatgagcaa
acaaaatcctttgagttcaaagttcaggctaaagatggaggatctcctcacatggagagc
acctctacagtcagggtcaatgttcttgacgtcaacgacaatctcccagttatcatttta
cccctcctgcagaatgatacagctgaaatcccagtgcctaggaacgtaggtattggatac
atcgtggcgacagtgaaagcggtggaccacgaccacggagaaagtggccatttgacctac
gagatcacggagggaaatgacgaccacctgtttgagatggatccggtgggaggagaggtc
aggactgcccacgctctttgggaagaggtcgcccctgtggttgagctggtggtgaaggta
actgaccatggcaagccccccttatctgccgtggctaagctgatcattagggcgaacaca
gaaacggcgccgggtgggggttccagcgcgagcggggaacagcagcactgggacgtatcc
ctgcccctcatagttaccctctgcattatctctgtcatgctcttagcagtcatgaccgcc
atcgctgtcaagtccaagcatcaagataaggagactgggaattataactgccgcatggct
gagtactccaatcctccagtggggaagggcaaaaagaaaaggatcaacaagagtgacatc
atgctggtgcagagtgagatggaggagagagattctgcgagccggatgaatgtggtgagc
agcccctcactcatcacttcgccaatatgttttgactaccagagtcctctgccgctcaca
ctgcccaggtcagaagtcatgtacctgaaaaccaccccaaacagcctgacagtccccagg
gcaggttgccactccagctttgccgggcttagcacagacactccagcgaataggatgtca
gtgatacagacagaaaattttccctcagagtccaattacgctggcagcaggcaaccattt
gttcaaagctcaacatttaaggatgcagaacgagcaagcctccgagacagtggccatggt
gatagtgaccaggctgatagtgaccaggatactaataaaggctcacactgcgacacgtct
gccagggaggccctcaagatgaaagcaacagcagttaatggccagccttttgagcaggag
caagacaaatcagtccactgcacggatgaatgtcgtgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgccgataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
agcagcagaaaaaccctcagcacgtttggaaaggaacagcgggacagtacaatcctcgtg
gccaatgtcaaaccttacttaaaatcgcagcgtgcactaagcccaccgctacaggaaagt
ccatccgcgtccagtagtcccagcaagagtagtatgcccctggacttggccaaccatgag
tccaaagaagagagggaggggggttcagacagcagtgcctatggcccaccagatggccag
tgctccccactgcacaccgaattggaggagccctcctacctgacctgtgagctcaggcct
aagtccctgtcaagcggtctcattcacagctctgtcatcagccaagagtgtggggggtca
gattatgtcctcgacccgcgggactccggtaactga
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