KEGG   Seriola dumerili (greater amberjack): 111218760
Entry
111218760         CDS       T05606                                 
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111218760
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     111218760
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_2 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 111218760
NCBI-ProteinID: XP_022596929
LinkDB
Position
Unknown
AA seq 930 aa
MGLKDHLEDGTGHILSLELDLDYLHVEGTERQGGLSSATAAGNIGVLQVRAGAPGNNSNS
AGSSSTSFSTHSSYSSSSSCSNFSEESAVSDSEDERLQNGSESQNPHQDQPHLHHQESSS
VCQPVRLDLTLNRSPRDPTQPETSASADPVTDCRTKVEFALKLGYPEELVLLVLKKLGAG
ALINDVLGELVKLGTKTEMEQQGGPTVSQSPSTSLTCSSSSSSSSFNSSLDSCRLLCPSQ
LLEDKENLRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQS
RPDALITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYR
DLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHRKQPCP
YGKKCTYGHKCKFYHPERGSQPQRAVADELRASAKISSVASRGLLEDALMMKSQSSGQGT
AEAEPSRGTPKKQPNPSPRSSFSDLLEDRLRVQSKVEGRRGSNSSSSSSCSSSFLGHPAP
GGPPSSGNLDPWEHPGGGGGASFRVAGASGPSQADTFHRCESPEPGYSSLVKAYSSLSLV
VPQSPECFFPADLRAGSLPSDCSSEGSVSSDSFSPDPLLDDGLKCHHHHHHPHHHHHCSG
QYNHPASRVPPGLGQYAPHGYPVPQALQRPHGFGLKTPSPPVTSHASPHPFKPPSAYIPP
HLQHPSLSGFPGEFPARPQCPPQPPPAHSHPRSSPLGRHLMGSLWQEGGLQDSRVYEGSP
LHSRRNYAGLNQQPQHQTNWDPRYQQSPKPCYDLFTFQSHPEVHEKDRHPLWGRQAHSSP
RGLSTSSLPPLPQLSLPSITPHKSHLPSLPQHQEPPALGRYQDLRERMFVNLCCIFPTDL
VRMVMARNPHVMDPQELAAAILLEKSQHGS
NT seq 2793 nt   +upstreamnt  +downstreamnt
atgggcctgaaggaccatctggaggatgggacaggccacatcctcagcctggagctggat
ctggactacctccatgtggaaggtactgagcggcagggcggtctgagctctgcgacggct
gctgggaatataggagtcctgcaggtcagagctggtgccccgggtaacaacagtaacagt
gctgggagtagcagcactagttttagtactcattcaagctatagcagcagcagcagctgc
agcaacttctccgaggagagcgccgtgtccgacagtgaagatgaacgactccagaatggg
tctgaatctcaaaatcctcatcaagatcagcctcacctacaccaccaagagtcctcctcc
gtctgtcagccagtcaggctggacctgacactaaaccgatccccgagagaccccacacag
ccagaaacatcagcgtctgctgaccccgtcacagactgccgcaccaaggtggagttcgcc
ctcaagctgggctaccccgaggagctggtgctgctggtgctgaagaaactgggcgcaggc
gcacttatcaatgacgtcctgggagagctggtcaaactgggaaccaagacagagatggag
cagcaagggggtccgacagtctcccagtctccctccacctctttgacctgctcctcctcc
tcatcctcttcctccttcaactcctctctggactcctgtcgcctgctgtgtccgtcccag
ctgctggaggacaaagaaaaccttcgtcctgttgtggtggacgggagcaacgtagccatg
agtcatggaaataaggaagtgttctcgtgtcaaggcatccagctggctgtggactggttc
ttggagcgaggtcaccgtgacatcactgtttttgttcccgcctggagaaaggagcagtcg
cgacctgacgctctcatcacagaccaagagatcctacggcgactagagaaggagaagatc
ctggtcttcacaccgtctcgccgcgtgcaggggcgccgcgtggtctgctacgatgaccgc
ttcatcgtcaaactggcctacgagtcggacggcatcattgtttccaacgacaactaccgt
gacctagccaatgagaagccagagtggaagaaattcattgatgagcgtctgctgatgtac
tcctttgtaaatgacaaattcatgccaccagatgacccactgggacgccatgggcccagt
ctggagaactttctgaggaagaggcctgttattcctgaacacaggaagcagccatgccca
tatgggaagaagtgcacatatggtcacaagtgcaagttttaccaccctgaaaggggcagc
cagccccagcgtgccgtggctgatgagctccgtgccagtgccaaaatttcatcagtagct
tccagaggcctgctggaagacgccctgatgatgaagagccaaagttctggtcaaggaacg
gctgaggccgagccgagtcggggaactccaaagaaacagccaaaccccagccctcgaagc
tccttcagcgacctcctggaggaccggctccgggtccagtccaaagtggaaggacgcagg
ggaagcaacagcagcagcagcagcagctgcagcagcagctttctggggcatcctgctccg
ggggggcccccttcatcgggaaacctggacccatgggagcaccctgggggaggtggtggg
gccagtttcagggttgctggagcctcgggaccaagccaggctgacactttccacagatgc
gagtctccagagccaggctacagttcactggtgaaggcctactccagcctcagtctggtg
gtcccacagagtcctgaatgcttcttcccagccgacctgcgagctggatcgctgccgtca
gactgtagcagtgaaggcagcgtcagctccgactccttctcccctgaccctctgttagac
gatgggctgaagtgccaccatcaccaccaccatcctcatcaccatcatcactgctccggc
cagtacaaccatcctgcgagccgtgtcccccctggactgggccagtatgctcctcacggc
tatcccgttcctcaagcactgcagagaccacatggttttggcctgaaaaccccttcacct
cctgtgacctctcatgcctctccacatcctttcaaaccgccttcggcctacatccctccc
caccttcagcatccatcgctgagcggtttcccaggggaattcccagctcgcccacagtgc
ccaccccaaccgccccctgctcactcccaccctcggagctctcccctgggccgccatctg
atgggttccctttggcaggaaggtggcctccaggactcccgagtgtacgaagggtcgccg
cttcattccaggagaaactacgccgggctaaaccaacaaccacagcatcagacaaactgg
gacccccgataccagcagtcccctaagccttgctacgatctgttcaccttccagagccat
ccagaagtccacgagaaggatcggcaccctctttggggcaggcaggcccactcatcaccc
cgtggcctttcaacatcaagtcttcctccgctcccgcagctttcccttccgtccatcact
ccccacaaaagccacctgccctcactgccccagcaccaggagccccccgccttgggtcga
taccaggacctcagagagaggatgtttgttaacttgtgttgcatcttccctacagatctg
gtgaggatggtgatggccagaaaccctcacgtgatggatcctcaggagctcgcagctgca
attttgttggagaaatcgcagcacgggtcttga

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