Seriola dumerili (greater amberjack): 111218760
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Entry
111218760 CDS
T05606
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111218760
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111218760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
111218760
NCBI-ProteinID:
XP_022596929
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MGLKDHLEDGTGHILSLELDLDYLHVEGTERQGGLSSATAAGNIGVLQVRAGAPGNNSNS
AGSSSTSFSTHSSYSSSSSCSNFSEESAVSDSEDERLQNGSESQNPHQDQPHLHHQESSS
VCQPVRLDLTLNRSPRDPTQPETSASADPVTDCRTKVEFALKLGYPEELVLLVLKKLGAG
ALINDVLGELVKLGTKTEMEQQGGPTVSQSPSTSLTCSSSSSSSSFNSSLDSCRLLCPSQ
LLEDKENLRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQS
RPDALITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYR
DLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHRKQPCP
YGKKCTYGHKCKFYHPERGSQPQRAVADELRASAKISSVASRGLLEDALMMKSQSSGQGT
AEAEPSRGTPKKQPNPSPRSSFSDLLEDRLRVQSKVEGRRGSNSSSSSSCSSSFLGHPAP
GGPPSSGNLDPWEHPGGGGGASFRVAGASGPSQADTFHRCESPEPGYSSLVKAYSSLSLV
VPQSPECFFPADLRAGSLPSDCSSEGSVSSDSFSPDPLLDDGLKCHHHHHHPHHHHHCSG
QYNHPASRVPPGLGQYAPHGYPVPQALQRPHGFGLKTPSPPVTSHASPHPFKPPSAYIPP
HLQHPSLSGFPGEFPARPQCPPQPPPAHSHPRSSPLGRHLMGSLWQEGGLQDSRVYEGSP
LHSRRNYAGLNQQPQHQTNWDPRYQQSPKPCYDLFTFQSHPEVHEKDRHPLWGRQAHSSP
RGLSTSSLPPLPQLSLPSITPHKSHLPSLPQHQEPPALGRYQDLRERMFVNLCCIFPTDL
VRMVMARNPHVMDPQELAAAILLEKSQHGS
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgggacaggccacatcctcagcctggagctggat
ctggactacctccatgtggaaggtactgagcggcagggcggtctgagctctgcgacggct
gctgggaatataggagtcctgcaggtcagagctggtgccccgggtaacaacagtaacagt
gctgggagtagcagcactagttttagtactcattcaagctatagcagcagcagcagctgc
agcaacttctccgaggagagcgccgtgtccgacagtgaagatgaacgactccagaatggg
tctgaatctcaaaatcctcatcaagatcagcctcacctacaccaccaagagtcctcctcc
gtctgtcagccagtcaggctggacctgacactaaaccgatccccgagagaccccacacag
ccagaaacatcagcgtctgctgaccccgtcacagactgccgcaccaaggtggagttcgcc
ctcaagctgggctaccccgaggagctggtgctgctggtgctgaagaaactgggcgcaggc
gcacttatcaatgacgtcctgggagagctggtcaaactgggaaccaagacagagatggag
cagcaagggggtccgacagtctcccagtctccctccacctctttgacctgctcctcctcc
tcatcctcttcctccttcaactcctctctggactcctgtcgcctgctgtgtccgtcccag
ctgctggaggacaaagaaaaccttcgtcctgttgtggtggacgggagcaacgtagccatg
agtcatggaaataaggaagtgttctcgtgtcaaggcatccagctggctgtggactggttc
ttggagcgaggtcaccgtgacatcactgtttttgttcccgcctggagaaaggagcagtcg
cgacctgacgctctcatcacagaccaagagatcctacggcgactagagaaggagaagatc
ctggtcttcacaccgtctcgccgcgtgcaggggcgccgcgtggtctgctacgatgaccgc
ttcatcgtcaaactggcctacgagtcggacggcatcattgtttccaacgacaactaccgt
gacctagccaatgagaagccagagtggaagaaattcattgatgagcgtctgctgatgtac
tcctttgtaaatgacaaattcatgccaccagatgacccactgggacgccatgggcccagt
ctggagaactttctgaggaagaggcctgttattcctgaacacaggaagcagccatgccca
tatgggaagaagtgcacatatggtcacaagtgcaagttttaccaccctgaaaggggcagc
cagccccagcgtgccgtggctgatgagctccgtgccagtgccaaaatttcatcagtagct
tccagaggcctgctggaagacgccctgatgatgaagagccaaagttctggtcaaggaacg
gctgaggccgagccgagtcggggaactccaaagaaacagccaaaccccagccctcgaagc
tccttcagcgacctcctggaggaccggctccgggtccagtccaaagtggaaggacgcagg
ggaagcaacagcagcagcagcagcagctgcagcagcagctttctggggcatcctgctccg
ggggggcccccttcatcgggaaacctggacccatgggagcaccctgggggaggtggtggg
gccagtttcagggttgctggagcctcgggaccaagccaggctgacactttccacagatgc
gagtctccagagccaggctacagttcactggtgaaggcctactccagcctcagtctggtg
gtcccacagagtcctgaatgcttcttcccagccgacctgcgagctggatcgctgccgtca
gactgtagcagtgaaggcagcgtcagctccgactccttctcccctgaccctctgttagac
gatgggctgaagtgccaccatcaccaccaccatcctcatcaccatcatcactgctccggc
cagtacaaccatcctgcgagccgtgtcccccctggactgggccagtatgctcctcacggc
tatcccgttcctcaagcactgcagagaccacatggttttggcctgaaaaccccttcacct
cctgtgacctctcatgcctctccacatcctttcaaaccgccttcggcctacatccctccc
caccttcagcatccatcgctgagcggtttcccaggggaattcccagctcgcccacagtgc
ccaccccaaccgccccctgctcactcccaccctcggagctctcccctgggccgccatctg
atgggttccctttggcaggaaggtggcctccaggactcccgagtgtacgaagggtcgccg
cttcattccaggagaaactacgccgggctaaaccaacaaccacagcatcagacaaactgg
gacccccgataccagcagtcccctaagccttgctacgatctgttcaccttccagagccat
ccagaagtccacgagaaggatcggcaccctctttggggcaggcaggcccactcatcaccc
cgtggcctttcaacatcaagtcttcctccgctcccgcagctttcccttccgtccatcact
ccccacaaaagccacctgccctcactgccccagcaccaggagccccccgccttgggtcga
taccaggacctcagagagaggatgtttgttaacttgtgttgcatcttccctacagatctg
gtgaggatggtgatggccagaaaccctcacgtgatggatcctcaggagctcgcagctgca
attttgttggagaaatcgcagcacgggtcttga
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