Seriola dumerili (greater amberjack): 111218771
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Entry
111218771 CDS
T05606
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111218771
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111218771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF4577
FctA
DUF5783
TMEM154
Motif
Other DBs
NCBI-GeneID:
111218771
NCBI-ProteinID:
XP_022596955
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MMRGKKFITYWYRWIFICSIHQFLFASVAQSEGNTIRYQTSEEDAPGTVIGNLAKDMSLS
LSHSSKSNFRMMKQFNDSFIRVRESDGELTVGERIDRERICRHTPQCLITFDVVNFSKDR
YKLIHVEVEVKDINDNSPEFPNKESVVEISENAAAGSRIPLDPAVDADVGSNYIQSYQIS
VNSHFTIDVLLRADGVKYAELVLMKELDRETQSSYTVELVATDGGNPYRSGSTKITIKVT
DFNDNSPVFDQNSFSVSLPEDAPVGTVILDLNAVDADEGSNGEVVYGFGKQVSHEIRELF
QVDNKSGRLTLRSPVDFEDKSTYELDVQATDLGPNPTPSVCKIIIHITDVNDNAPEISIT
PMTSITTGIAYISEAADKDSLVALISTLDRDSGVNSQVHCTLYGHDHFKLRQAYEDSYMI
VTAAALDRERISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTKAVYEVSVVEN
NAPGAYITTVEASDADLGNNGKITYRLVDSVIMGSPVNTFVSLNSVSGSIYALRSFNYEV
MKHLDIHIQASDGGSPQLQSTAVIRLKIVDQNDNQPSIIEPPLYKGSAEVFLPKDAPAGY
VVTQIKATDADEGTNAQLSYKITEGGHLGFSINKDTGKVHVSRQLTYDLTDNVKVTVSVS
DNGSPALTSTAIIHLSFIEGTLPSLPSFAQNGSEELFEWDMSIAIIIVLAGSCSLLLLAI
ILITTICSRRKKETRERGCDEKDDIPNVEKVESGHIDSVIANHKGKVFDAHPFPEKPPLA
GSNTAEPGCEDGRQTAGIFESNSRVMEGKLKGYSTLPGYGKETVRPITIWKGNSFTTISA
RDPHISGKDSGKGDSDFNDSDSDISGDVHKKESPPMNSLWACTSECKVLGHSDRCWSPSA
TRPNTSMACGPHLSTFSKTASLPRDSRRENYYPAHIAKTNGLQSVYEQVQHQELDYILVG
PPTPARIQETDEISIPEYTNS
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcggcaaaaaatttataacttactggtaccggtggatttttatatgctcaatc
catcaatttttatttgcctcagtggctcaatccgaaggaaatactatacgataccagacc
agtgaggaggacgcaccaggtacagtcatcggaaaccttgccaaggacatgtccttgagt
ctgtctcattcctccaagagcaattttaggatgatgaaacaattcaatgattcattcatc
agggtgagagaaagcgacggggaactgactgtcggggaacgaattgacagggaaagaatc
tgcagacacactccacagtgtcttattacttttgacgtggtaaatttctccaaagatcgc
tacaaattgattcacgttgaggtggaagtaaaggacatcaatgacaactctccggagttt
ccaaacaaggaatccgtagtggagatctcagagaatgcagcagcggggtcccgtatccct
ctagacccagctgtggacgctgacgtcgggtcaaactacatccaaagctaccagatttct
gtcaacagtcatttcaccattgatgtgctcctgagagcggatggggttaaatatgcggaa
ttggtgctaatgaaagagctagacagggagactcagtcatcatacactgtggagctggtc
gccacagacggagggaacccatacagatcggggtcaacaaagataactatcaaagtgact
gactttaatgacaatagtcccgtttttgaccagaatagtttctcagtcagtttgccagag
gacgcgccagttggcactgtcatcctggacttaaacgcagttgatgcagatgagggttca
aacggagaggtcgtctacgggttcggaaaacaggtttctcacgagatccgagaacttttc
caagtggataataaatcgggtcgcctgacgctcaggagcccggtggattttgaggacaaa
agcacctacgagctagacgtgcaggcgactgatctgggacctaacccgaccccctccgtg
tgcaaaatcataattcatatcacagacgttaatgacaatgccccagaaatcagtatcacc
ccgatgacctccatcacgacaggcatcgcctacatcagcgaggcggcagacaaggacagt
ctggtggcgctgatcagcaccttggacagagactcgggtgttaacagccaagtccactgc
acattgtacggccacgaccatttcaaactccgtcaggcgtacgaggacagctacatgata
gttacagcagcagccctagacagggagaggattagtgagtataacttgacggtcatggct
gaggattttgggtcacctccgttgagaaagatcactcagtacaccattagactcagcgac
gagaatgacaacgcccctcacttcactaaggctgtctatgaagtttcagtggtggaaaac
aacgccccgggggcttacatcaccacagttgaggccagcgacgcggatctgggcaacaat
ggcaaaattacttacagactagtggacagtgttatcatggggtccccagtgaacaccttt
gtgtcgcttaattcagtgtctggctctatatatgcactaagaagttttaattatgaagta
atgaagcatctagacatacacatccaagccagtgatggggggtcaccacagctgcagagc
acagctgtcatcagactgaaaatagttgatcagaatgacaaccaaccttctatcatagag
ccacccctttacaaaggatctgctgaggttttcctgcccaaagatgcacctgcaggttat
gtggtaacccagataaaggccacagatgctgatgaaggcacgaatgcacagctgtcctat
aaaatcaccgaggggggacacctgggtttctccatcaacaaagacacggggaaggtgcac
gtgagccgacagctgacatatgatctcacagacaatgtcaaagtcacagtgtcggtcagt
gacaatggatcccctgcgcttacctccacagccattatacacttaagtttcatagagggt
actctccccagcttgccttcctttgctcaaaatggcagcgaggagctctttgaatgggac
atgtccatagccataatcattgtactggcagggagctgctctctcctcctgctggcaatc
attctcatcacaaccatttgcagccgccggaaaaaagagacaagggagagggggtgtgat
gaaaaagacgacataccaaatgtggagaaagtggaaagtggtcatattgattcagtgatt
gccaaccacaaaggcaaagtgtttgatgcccatccatttccagagaaacctccattggcc
ggcagcaacacagcagagccaggctgcgaggatggaaggcagacagcaggtatctttgag
tcaaacagcagagtgatggaaggtaaattaaagggttattctacacttccaggatatggg
aaagaaactgtcagaccaataacaatatggaagggtaattcattcacaaccatatcagca
agagatccccacatcagtggcaaggacagtggaaaaggggacagtgacttcaatgacagt
gattctgacataagtggagatgtgcacaaaaaagagtcgccaccaatgaacagtctctgg
gcttgtacaagcgagtgcaaagtgttgggacactccgaccgatgctggagcccttcagct
acaaggcccaacacgagcatggcctgtggaccgcatctgtcaacgttctccaagacagct
tcacttccccgggacagcaggagggaaaactactatccagctcacatagccaaaaccaac
ggtctgcaaagtgtgtacgaacaagttcaacaccaggaacttgattatattctcgttggt
ccaccaacaccggccagaatacaggaaacagatgaaatatcaatcccagagtatacaaac
tcttaa
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