Seriola dumerili (greater amberjack): 111218800
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Entry
111218800 CDS
T05606
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2-like
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111218800
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111218800
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
HECT type E3
111218800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
111218800
NCBI-ProteinID:
XP_022596998
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MRPSLATAVLPPRTRSHNPPNLAVGGREHLSAPRRRSPHLRHTLSPENLRTLAERGGAAV
DTVSVVSSPIGLPRANSDTDLVTSQSRSSLTASTLEYTLNRGQNLVISWDIKEEVDATDW
IGLYHIDETSPSNVWDCKNRGVNGTQKGQIVWRLEAGPYFMEPETKICFKYYHGVSGALR
ATTPCITVKNPAVLVCGPGLAEQVGIEHPRKLISFTLTDLRATGLKKGMFFNPDPYLKMS
IHPGKRSVFPIFSHHGQERRSAIIANTTNPIWHGEKYTFVALMTDILYIEVKDKFAKSRP
IIKRFLGQLTIPVQRLIEKIPGVQPVSFSLCRRLPTEHVSGQLQFKVELTSTGPDGASPD
SIIGISSLNGAPGTPSDDEDLPHHLPGVVSSGPSPTGSQGSQGMWEGAAAACVEKDLTLV
GAEARYMEPESFSGHEMLQRSFSEGLDAIEAPKGPGERPLGAASPKLRSSFPTNTRLSSM
LHIDSDEDEDRSGANDISPVPLSPLLMNGEPLDVGGPDEDDPFPELQQEPEQLETSVLEE
EPEGACALAEDMPPEVDVEAGLDLEDVLEPDVFSEVEEAPFTEAVSHNTLPEGGELPEEG
RVPGEEPSSEIDTCSMATAAQTVFSSSESCPITLTTAVEAEEGAETAIDPGGDVVPSTPP
TTQAVDDEGGGQTDVTEAEGEAPAASGQEEVEETSVRRLSLQAAGGVAEEQEGEVTKPQE
EAGSADSEQVTTETDGEDGTHVNGHPVRSLPSVRHDIHRYQRVDEPLPPNWEARIDSHGR
IFFVDHVNRTTTWQRPTGPPAPQGLTRSNSIQQMEQLNRRYQSIRRTITNSDRSEEASVD
LLPEPESDLMPQSISEYRRESAVAHGSGRSRLSLLLQSPSAKFLCSPDFFTVLHSNPSAY
RMFTSNTCLKHMISKVRRDAHYFERYQHNRDLVTFLNMFSNKQLELPRGWEMKHDHTGKP
FFVDHNCRSTTFIDPRLPLQSSRSTGLLAHRQHLSRQRSHSAGEVVDDSRQTNPPVMPRP
SSTFSGSSRSQYHDVVPVAYNDKIVAFLRQPNILEILQERQPELARNHSLKEKVQFIRSE
GVTGLARLSSDADLVMLLSLFEEEVMSYVPPLLHPGYCISSPQSSPGTQRANARAPAPYK
RDFEAKLRNFYRKLETKGYGQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSF
VGEDGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFS
GRILGLALVHQYLLDAFFTRPFYKGLLRIPCDLSDLEFLDEEFHQSLQWMKDNDIEDMLD
LTFTVNEEVFGQITERELKPGGAGIPVSEKNKKEYIERMVKWRIERGVAQQTESLVRGFY
EVVDVRLVSVFDARELELVIAGTAEIDLADWRNNTEYRGGYHDNHIVIRWFWAAVERFNN
EQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKITSLPRAHTCFNRLDLPPYP
SFSMLYEKLVTAVEETSTFGLE
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccttcactcgctactgcagtcctaccacccaggacccgttcccacaatcctccc
aacctggctgtggggggccgtgaacacttgtcagctccaagaaggcgcagcccgcacctc
cggcacaccctcagcccagaaaacctgcggaccttggcggagaggggcggggccgctgtc
gataccgtctctgtcgtcagcagtcccatagggcttccacgggctaacagcgacacagac
ctggtgacctcccagagccggtcctcgctaacagcgtcaactctggagtacacactgaac
cgtggtcagaaccttgtcatatcctgggacatcaaggaggaagtggatgctaccgactgg
atcggcctgtaccacattgatgaaaccagtccgtctaacgtgtgggactgtaagaacaga
ggggtgaatggcacccagaaaggacagattgtttggaggctggaggctgggccctacttt
atggagcctgagaccaagatctgtttcaagtactaccacggagtgagtggagccctgcga
gctacaaccccctgcatcaccgtgaagaatccagccgtcctggtctgtggccccgggctg
gcagagcaggtgggcattgaacatcctcggaaactgatcagctttactttgacggatttg
cgtgctactggcctgaagaagggcatgttttttaatccggacccttacctgaagatgtcc
atccacccagggaagaggagcgtcttccccatcttcagtcatcacggacaggaacgaaga
tcagccatcattgctaacaccaccaaccccatctggcatggagagaaatacacattcgta
gcactaatgacagacatcctgtatattgaggtgaaggacaaattcgcaaaaagccgacca
atcatcaaacgcttcctcggtcagctcactatccctgtgcagcggcttatagaaaaaata
cctggtgttcagcctgtcagtttctctttgtgtcggcgcctgcccactgaacacgtaagc
ggccagttgcagttcaaagtggagctcacctcaaccgggcctgacggcgcttctcctgat
tctatcattggcatttcatccttgaacggagctccggggactccatctgatgatgaggac
ctgccacatcaccttccgggggtggtttcttcaggcccctcccctaccggctcccagggt
tcccaaggcatgtgggaaggtgcggctgcggcctgcgtagaaaaggacctgactcttgtc
ggagccgaggcgagatacatggagcctgaaagcttctcgggccatgaaatgctccagagg
tcattcagtgagggtctggatgctattgaggcccccaagggtcctggtgaaagacccctg
ggtgcagcctcacccaaactgcgctctagcttccccacaaacacaaggctcagctctatg
ttgcacatagattcagacgaggatgaagacaggtcgggggccaatgacatctctccagtg
ccactgtcaccgctgctgatgaacggagagcctctagatgtcggcggtcccgatgaagac
gatccatttcctgagctacagcaggagcctgagcagctagagacctcagtgcttgaagag
gagcccgagggtgcatgtgctttggcagaggacatgccccctgaggtggatgtggaagca
ggtctcgacttggaggatgttttggagccagacgtcttctccgaagtggaggaggctcct
ttcacagaagccgtgtctcataacactttgccagaaggtggagagctgcctgaggaagga
agggtccctggcgaggaaccctcatcagagatcgacacctgctccatggcaacagccgca
cagacggtcttctcatcatcagagagctgtccaatcacactgaccactgctgtggaagcg
gaggagggagcagagacggccattgatccagggggagatgtagttcccagcaccccacca
actactcaagctgtagacgatgaaggcggtgggcaaactgatgtcactgaggctgaagga
gaagctccggcagccagcgggcaggaggaggtggaggagactagtgtaaggaggctcagc
cttcaggctgcagggggcgtggctgaagaacaggaaggggaggtgacaaagccacaggag
gaggcggggtctgcggattcagagcaagttaccacagaaacagacggagaggatggtacc
catgtcaacggccatcctgtacgttcgcttccttctgtacgtcacgacatccaccgatac
caacgtgtggacgagcctctgccccccaactgggaggctcgtattgacagccatgggagg
atcttctttgtggaccacgtcaacaggaccacaacatggcagcgtcccaccggacctcct
gccccgcagggcctgacccgctccaactccattcagcagatggagcagctcaaccgcaga
taccagagcatcaggaggaccataaccaacagtgatcggtcagaggaagcctcggttgac
ttgttacctgaaccagaaagcgatctaatgcctcagtccatatctgaataccggcgcgaa
agtgcagtcgctcacggcagcggccgctcgcgcctctccctgctgctccagtcgcccagc
gccaagttcctgtgcagccccgacttcttcaccgtgctgcattcaaaccctagtgcctac
cgcatgtttacgagcaacacctgcctgaagcacatgatcagtaaggtgcgccgggacgct
cattactttgagcgctaccagcacaaccgcgacctcgtcaccttcctcaacatgttctcc
aataagcagctggagcttccccgaggctgggagatgaagcacgaccatactgggaagccc
ttctttgtggatcacaactgtcggtccacgaccttcattgacccacggctgcccctccag
agttctcgctcgaccgggctgctggcccaccgccagcatctgagccgccagcgcagccac
agtgccggggaggtagtggacgactctcgccaaaccaacccgcccgtcatgccccgcccc
tccagcaccttcagcggctccagtcggagccagtaccacgacgtggtgcctgtggcctac
aatgacaagatagtggcgtttctacggcaacccaacatcttagagatactgcaggaaagg
caacccgagctagccagaaaccactcgctcaaggagaaagtgcagtttattcgcagtgag
ggagtcactgggctggctcgtctctctagtgacgctgacctcgtcatgctgcttagctta
tttgaggaggaggtgatgtcatatgtgccaccgctactccacccaggttactgcatctcc
tcccctcagagctcccctggcactcagcgagccaacgcccgtgctcctgctccctataag
cgagattttgaggcaaaactgaggaacttctatcgaaagctggagaccaagggttatggc
caaggaccagggaaagtcaagctgatcatacgcagggaccacctcctggaggatgccttc
aaccagatcatgtgttactctcgtaaagacctacagaggagtaaactctatgttagcttc
gtgggcgaggacggactggactacagcggaccctccagagagtttttcttcctggtttcc
agagaactgttcaacccgtactacggcctgtttgaatattcagccaacgacacgtacact
gtccagatcagccccatgtctgccttcgtagacaaccaccatgagtggtttcgcttcagt
gggcgtatccttgggctggctctggtccatcagtacctgctggatgccttctttaccaga
cccttctacaaggggcttcttcgcatcccgtgcgacctgagtgacctggagttcctggac
gaggagttccaccagagccttcagtggatgaaggacaatgatatcgaagacatgctggac
ctcaccttcactgtcaatgaggaggtgtttggacagatcacagagagagagctgaagccg
ggcggggctggtatccctgtgtcagagaagaacaagaaggagtacattgagcgaatggtc
aagtggcgtattgagagaggagtggcccagcagacagagagcctggtccggggcttttat
gaggtggtggatgtgcgactggtgtctgtgttcgatgccagggagctggagctggtgatt
gcaggcactgcagagatcgacctggcagactggaggaacaacacagagtacagaggaggt
taccatgacaaccacatagtgattcgctggttctgggcggctgtggagagattcaacaat
gagcagaggctgaggctgctgcagtttgtgacaggcacctccagtattccctatgagggc
tttgcctctctgcggggcagtaatggaccccgcaggttctgtgtggagaagtggggaaaa
atcacctccttacccagggctcacacttgctttaatcgtctggacctcccaccttacccc
tccttctccatgctctatgagaagctggtcactgctgtcgaggaaacgagcacgttcggt
ttggaataa
DBGET
integrated database retrieval system
