Seriola dumerili (greater amberjack): 111219130
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Entry
111219130 CDS
T05606
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00310
Lysine degradation
sdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111219130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111219130
03036 Chromosome and associated proteins [BR:
sdu03036
]
111219130
Enzymes [BR:
sdu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
111219130
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111219130
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111219130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_11
zf-C2HE
zf-C2H2_6
Zn_Ribbon_YjdM
zf-C2H2_8
zf-C2H2_3rep
zf-C2H2_ZNF462_1st
Zap1_zf1
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
111219130
NCBI-ProteinID:
XP_022597444
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MEDSPHLYFSEFGDNEDEEEEEDIYQEETNMEPDMIRSQNTDLHKHPNQDTERVWDSFPC
QHCERHFTSKQGLERHMHIHVLANNEAHAYKSNKSNMSFGSNVGQLQHEKMKPLDSVSPV
MQRHTSSPTSSNTSSLSAEDHIAQPDKQGALDGHHACKYCEKIFTTYTNKRRHERRIHEQ
HLQLPSVEKTQLPQEESLQRIFPETSQQETQLVDNPAPAAVENDGEHIEQYMLDISSNIS
ENLSFYIDGKIVSTSTVSSCEAAEVHSGSSTLVGLDALILDPTQITQVLNTDSVTGKEIP
GQPLAKRRTATPPLLPQIKTELESEVVVSSSSSSLVSSLIENLLPQNTESTVVQKERTVY
LSPKLKQLLEKQDGLKPTLALITDGQKPCSPVSLSVLPTATGRFKRRTGSPTSSPQQNPT
SNEETPASDTGNFDAVNTGQMETQQISPVHLTASEKDDTTPSVEDPAVKPVLTESWPPMT
GGNSCNQQPLDLSNTIKRNEDVALADAVLDLSLQKKSLGESELTLNLVSQAALKEEQTNT
CMVEKALMNIGKQNESLGNPEAPLVTDFTIVSGSDMVTPVEPVAEGLVYGLALPPNSLTP
SSASLTPVTLQPASPCTIAFASPASHTVVPSAPSLITVLAPPPPISNPSSQPIQVLAPNI
SPEPLVICSENTLNSSECDLTTAFATTNSANLVTLSQPLDPTLNLPGHVFLTDQIALNPP
IVDSAPVSEVPFSPTVTLNDSLINSYNITSNTVLIECTIALEAPGSVVPAAITLQENTPE
APAPTQMVVNHIEQQQIVSLPNPQTVDPTILVSSIAESVTLSTTTSVVSNCHSVGESSPI
AEPVVNAEPPGTKEEEAADSTVCIPEIPSNTSPPSEKAEEDESSNNTPNDAQQQTFTKNF
ICNVCDKLFHSMKELGHHVGDHADEWPYKCEFCVLLFGKPSALLDHRSSLHGVGKTYVCS
ACTKEFVYLCNLKQHQEELHPGQQCTYTEEEKGKLRPQNYNNATKVNTESSVHDVPEEPK
KLVKKEEGEVDGAAEELFTTIKILASDGGKIKGPDVRLGINQHYPSFKPPPFPYHNRSPA
GSVASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPI
PLRHFAKTQNGVLSTTNSTNGLNASNRASQSNRSKPNQESPVKMKFKVLNKRKKKLVQRV
MPQRNKSVSSSNKVSSAPVHEQQEIFVCPHCSREFTMRRSRTKHMAVCPKKPKEAKKRKE
GGISVTKENDGHLHRGVSHVEEKQQRASPQHKTRFQTSGPAKRPAILPVQTVFSNKRSKI
IIKESKQPTQETQTLNELPIVRTFNPSMRQYSRVQQSVKGIPIKITIVKPQQTAPQKDEL
PPNQSQEEESGGVTSSSEQSATA
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctcctcacttgtacttttctgaatttggagataatgaggatgaggaggag
gaggaggatatttatcaagaggaaactaacatggaaccagacatgattaggtctcaaaac
acagatcttcataaacatcccaatcaggataccgagagagtctgggactcttttccctgc
cagcactgtgaaagacattttaccagcaaacaaggcttggaacgacacatgcacatccac
gttttggcaaacaatgaggcacatgcatacaaaagcaataagagcaacatgtcttttggt
tcaaatgtaggtcagttgcagcatgagaagatgaagcctctggattcagtaagtccagtc
atgcaacgtcatacttcttcccccacaagctctaacacctccagtttgtctgctgaagac
cacattgctcagccagacaaacagggagcattagacggccatcatgcttgcaagtactgt
gaaaagatattcacaacatataccaacaagcgacgacatgagcgcaggatccacgagcag
cacctgcaactcccatctgtagaaaaaacccagctgccccaggaggaaagtcttcagagg
attttccctgaaacgtctcaacaggaaacacagcttgttgacaatccagcacctgcagct
gttgagaatgacggggaacacatagaacagtacatgctagatatctctagtaatatttca
gagaatctcagcttttacattgatggaaagatagtgtcaacaagtacagtgagtagctgt
gaagcagctgaggttcattcagggtcttcgactttagtgggactggatgccctgattcta
gaccccacccaaatcacccaggttttaaatacagattcagttacaggcaaagagattcct
ggccaaccactggctaagagaagaacagcaacaccacctcttttaccacaaataaaaact
gaactggagtctgaggtcgtggtgtcctcttcgtcatcatcacttgtatcttctttaatt
gagaatctacttcctcagaacacagagtccacagtcgtgcagaaagaaagaacagtgtac
ctgtctcctaagctgaagcagctcttggagaagcaggacggccttaaacctacacttgcc
ctgatcacagatggccagaagccttgttcacctgtctctctctctgtcctgcctactgca
acaggaaggtttaaaagaaggaccggatctccaacaagctctccacagcaaaacccaaca
tctaatgaggaaacaccagcatcagatacgggcaattttgatgctgtgaatacaggacag
atggagactcagcagatctcacctgtgcacctcacagccagtgagaaggatgacacaaca
ccatctgtagaggatccagcagtgaaacctgtcttgacagagagctggccccccatgact
ggtggcaattcctgtaaccagcaaccactggatctctctaatacaattaaaagaaatgaa
gatgtagctctagctgatgctgtgctggatttgagtttgcaaaaaaagagcctaggtgaa
tctgaactgacattaaatttagtttcacaagcagctttaaaagaagaacaaacaaataca
tgtatggtggagaaagccttaatgaatattggaaaacaaaatgaaagcctagggaatcct
gaggctcctttagtcacagacttcaccatagtctcaggttcagatatggtgaccccagtg
gaacctgttgcagaaggtcttgtgtatggactcgccctaccccccaattctctgactcca
tcttctgcctcccttaccccagttaccttgcagccagcttcaccgtgcactatagcattt
gcttccccagcctcacacactgtggtcccttctgctccttcattaatcacagttttggcg
ccaccaccacctatttctaacccttcaagccaaccaatccaggtattagccccaaatata
tcccctgagcccttggtaatctgctcagaaaatacattaaattcttcagagtgtgattta
actactgcatttgcaacaacaaattctgcgaaccttgtcacactctcccaaccccttgat
ccaactttaaatctaccaggccacgtgtttctcactgatcagattgctctaaatccacct
atagttgactccgctcctgtgtctgaggtgccgttctcaccaactgtaactttaaatgac
tccctcatcaactcttataacattaccagcaacacagtgttgatagagtgcacaatagct
cttgaagccccaggtagtgtagtccctgctgcaattaccttgcaggaaaacactcctgag
gctccagcacctacacaaatggttgttaatcatatagaacagcaacagattgtttcactg
cccaaccctcaaactgtggaccccactattcttgtgtcctccatcgcagaatcagtaact
ctgtccaccaccacctcagtggtatctaattgtcattctgtgggtgaatcaagtcccatc
gcagaacctgttgttaatgcagagccaccaggcacaaaagaggaggaagctgctgacagt
actgtttgcatacccgaaataccatctaacacctcacccccctctgagaaagctgaagag
gacgaatcctcaaataacacaccaaatgatgcacaacagcagactttcaccaagaatttc
atctgcaatgtgtgtgataagcttttccattcaatgaaagaactaggccatcatgtaggt
gaccatgctgatgaatggccctacaaatgtgaattctgcgtgctgctctttggcaagccc
tctgctttgcttgaccatcgatcaagcctccacggtgttggcaagacttatgtttgcagt
gcatgtacaaaagaatttgtctacctttgcaatctgaaacagcatcaggaggaattacat
cctggccagcagtgtacatacaccgaagaagaaaagggaaaactaagacctcagaactac
aacaatgcaacaaaggtcaacacagagtcctcagtgcacgatgttccagaggaacccaag
aaattggtgaaaaaggaggaaggtgaagtagatggagctgctgaagagctgtttacaaca
attaaaatcctggcctcagatggaggcaaaatcaaagggcctgatgttcgtcttggcatt
aaccagcactatcccagcttcaagcctcctccttttccttaccataacagatcacctgct
ggctcagtggcttcagccacaaactttaccacccacaacatcccacaaacctttagtaca
gctattcggtgcaccaagtgtggaaagagctttgataacatgccagagctacacaagcat
atcctggcttgtgcaaatgccagtgataaaagacgatacacaccaaaaaagaatcctata
cctctacgccactttgcaaaaactcagaatggagtgctgtcaactactaattctactaat
ggactaaatgcttcaaacagagccagccagtcaaacaggtccaaacctaaccaagaatcg
ccagtaaagatgaaattcaaagtgctgaacaaaaggaagaaaaagttggtccaaagggtt
atgccacagaggaacaagtcagtctcctcatcaaataaagtgtcgtctgcaccagtgcat
gagcagcaggagatttttgtgtgcccacactgtagcagggagttcacaatgcgtcgcagc
agaaccaaacacatggctgtctgccccaagaaacctaaagaggcaaagaaaaggaaagag
ggaggaatctctgtgacaaaggagaatgatggacacctgcatagaggtgtttctcatgtt
gaagagaaacaacaacgagcctcacctcaacataaaaccagattccagacttctggcccc
gctaagaggcctgccatcctaccagtgcagactgtcttctcaaacaaaagaagtaaaata
atcataaaagaaagcaagcagccaacacaagagacacaaactctgaatgaacttccaatt
gttcgcactttcaacccctctatgcgacagtatagcagagtgcagcaaagtgtcaaagga
attcccattaaaatcactatagtgaaaccacaacagactgcaccacagaaggatgagctg
cctcctaaccagagccaagaagaagaatctggaggcgttaccagcagctctgagcagagc
gctacagcttga
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integrated database retrieval system
