Seriola dumerili (greater amberjack): 111219170
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Entry
111219170 CDS
T05606
Name
(RefSeq) LOW QUALITY PROTEIN: immunoglobulin superfamily DCC subclass member 4-like
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111219170
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
DCC/UNC5 family
111219170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
ig
Ig_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Ig_ILCR1
Adeno_E3_CR2
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
111219170
NCBI-ProteinID:
XP_022597506
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MCHLCLSFYGDAFLQAKYVEGTPPAEGETLSRTGGDNSGFQHMHVAITVXAGCIDARCYP
TGGNQRLYMAVESTIWLFCLLSLFCGPSKQEKPVSVELSCGAGPSHVVLEPGSPLLLDCN
LGASDTPFNVTWLQDGKTLPLEEGDDYLQYLGNGSLLLLPTSKDGHPAQDVEGGYSCVSA
SALGALTSRTVNVLLASLSKFHQEPSPQTVPVGGAARFECQIEGVPTPVITWEKNKEAVT
EVTRFISLPNGVLQILEVTKQDEGAYRCVASNSARKDISHEAKLTVTSGSTEALNRVVIV
APPQNATVVLGGPAVMECMAQGQPKPLVSWSRQDGKPISTDVVVLATNLVIRDTRRHHAG
IYVCRANKPKTREFVIAAAELHVPAPPVILQPPETVSLSRGNTARFVCNSSGEPPPVLHW
LKNGQPIKSFRRVKTQSPGVLLINQLALEDAGYYQCIADNGLGTACATAKLTVIVREGLP
SPPRHLSATPYSSTTALLTWEKPEYNSDQIIGYSVHCQRAAGSDNVEYQFAMNNDTTEYH
FKELLPHTAYTFFVVAYSPMGASRPSLPVTVEMLEDVPSAPPQLSIASTSPTDIRLMWHP
LSSQHSRGAVTRYRIEYSSLDQADTVFTVEVGGNETQFTLRELQPNQAYRLRIAAGTGVG
FGIPSEWAQHQTLAHYNHSDHSMVIFAPTELKVRARVNTLNVTWHPSPNHTLVSGYKLSC
REVEAEESANGQRSTQTHTIRLRKKARYHLLTGLVPDRQYEVRVWAFNKQIDGAAAMWKG
RTDKAHDRTPSPPMRPPPLPPSSIQATTNSSTSIWLRWEKPRFSNVRIINYTVRCSPAGT
TNASLVSYHTSSAQEILLGALKPFTRYELAVQSNGVDVVGPFSGTVEESTLSDRPSTPPE
ELQLSALDSSSVLVSWRPPLEPNGVIISYMILYSGNLSQPEHLWKNLSQDGSITSVEVQG
LSSGTHYFFKLGASTEVGPGPYSPVKDVHTPLQTYELDIHAVTGIIVGVCLGLICILLCM
CFSFRNSKSRDISGGLDSTAVTPQYRRGGCPIPSNLPECNDSHELETLMPPGSQESGQPL
AEAPEEQSLMASANPGEGEDGPAPEPKAAWNGSVSHNWANRITRYRDTITEDCPTLINGA
LNMLITDNGTGLEDQLCTSLCSNQVEAEVIVHSELSDPGGDKEEEGSEREKDSNATRGPS
LSEDRYSPLSQPSLPGEEEPLEKLSLAQSPSSFPSIKLVGNHNRELDIPGDQPVAVIQPH
QDMGLTNGFHSPKTVRSVLRSEHLENGDSRHCPSAPGKAISVGLSPAPFVSSGFVHSTSA
AHSYLCP
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtgccacctttgtcttagtttctatggagacgctttcctccaggccaagtatgtggag
ggcacccctccagcggaaggagagactctttcacgcaccggcggagacaatagcggattc
caacatatgcatgtcgctataacggtantagctggttgtatagacgcacgctgctacccc
actggtggaaatcaaaggctgtacatggcggtggagagtacaatttggctgttctgtctt
ctttcgctgttttgtggtccatccaagcaagaaaagcctgtttcggtggagctgagctgc
ggggctgggcccagccatgtagtgttggagccaggttcgcccctcttgctggactgcaat
ctgggggccagcgatacacctttcaatgttacctggcttcaggatggcaagaccctgcct
ctggaggagggcgatgactatctgcagtatttgggcaatggatccctcctcctgctgccg
acctccaaggatggccaccctgcccaggacgtggaggggggctacagctgcgtgagtgcc
agcgcccttggagccctgaccagccggactgtaaatgtactcttggcaagtctgtccaag
ttccatcaggagccatcaccccaaacagtgcccgttgggggagctgcccgcttcgagtgc
cagattgagggagtacccacacctgttattacctgggaaaagaacaaagaggctgtcact
gaagtgacaaggttcatttcccttcctaacggggtgctccagattctagaggtgaccaag
caggacgagggtgcctaccgctgtgttgcatccaactctgccaggaaggacatcagtcat
gaagccaagctcactgtcacctcaggctctactgaagccctgaacagagttgtgattgtt
gcaccacctcagaatgccacggtagtcctcggcgggccagctgtgatggagtgtatggca
caaggccagccgaaaccactggtgtcctggagcagacaggatggaaagcccatttccact
gatgtggtcgtcctcgcaacaaacctggtgattagggacacaaggcgtcaccatgccggc
atctatgtctgccgggccaacaagcccaagaccagagagtttgtcattgctgctgctgag
ctgcatgtgcctgcccctccagtgatcctccagcccccagagacagtgtccctctcccgg
ggaaacacagccaggtttgtgtgcaacagctctggggagcctcctcccgtgttgcactgg
ctgaagaacggccaacccatcaagtcattcagacgagtgaagacccaaagccctggagtc
ctgctcatcaaccagctggcactggaggatgctgggtactaccagtgcatagcagacaat
gggctgggcacggcctgtgccactgccaagctgacggtcattgtgagggaaggtctgccc
agccctcctcgtcacctgtctgctacaccctactccagcacgactgctctgcttacctgg
gagaaacctgagtacaactcggaccaaatcatcggctactctgtgcactgccagcgcgct
gcaggctcggataatgtggagtaccagtttgcgatgaacaacgacaccacggagtatcac
ttcaaagagcttctcccccatactgcatacacattctttgtggtggcttattctcccatg
ggtgccagtcgcccatccctgcctgttactgtagagatgctggaggatgtaccgagtgca
cctcctcagctgtctatagccagcacctccccaacagacataaggctgatgtggcatcca
ttgtcctcgcagcacagtcgaggagctgttacccgctaccgcattgagtacagctctctg
gatcaggcggacacagtgttcacagtggaggtagggggtaacgagactcagtttacactg
agagaactgcagcctaaccaggcctaccgactgaggatagcagctggaacaggtgttggc
tttgggatcccatctgagtgggcccagcaccaaacattagcccactacaaccacagtgac
cacagtatggtgatctttgccccgactgagctgaaggtcagagccagagtgaacacactc
aatgtgacctggcatccctcacccaatcacacactggtctctggttacaagctgtcctgt
cgtgaggtcgaggccgaggagtcagccaatgggcaaaggagcacacaaacccacaccatc
aggctccgtaagaaggctcggtatcatctcctcactgggctggtccctgaccggcagtat
gaggtgagagtttgggcattcaacaagcagatagatggagcagctgcaatgtggaaggga
aggacagacaaagcccatgacagaacaccgtcgccgcccatgcgcccccctccgttgccc
ccaagcagcatccaagccacaaccaacagttccacctccatctggctgcggtgggagaaa
ccgcggttcagcaacgtacgcatcatcaactacacggtgcgctgcagcccagcgggaacc
acaaatgcctctctggtctcctaccacaccagctctgctcaggagatactgctcggggca
ttgaagcccttcacccgttatgagctggctgtacagtctaatggagtggatgtggtggga
cccttcagcggcacagtggaggagtccactttgtctgaccggccctccacacctccggag
gagctgcagctgagtgctctggactcctcctctgtgctggtgagctggcgccctccactg
gagcctaatggtgtcatcatcagctacatgatactgtacagtggcaacctcagccagcct
gagcacctgtggaaaaatctctcccaggatgggagcattaccagcgtggaggtccagggt
ttgtccagtggcacccattacttttttaagttgggagcgtctactgaggtggggccaggg
ccttattcacctgtaaaggatgttcacactccccttcagacatatgagctggacatccat
gcagtcacaggcatcatagtcggtgtatgtctgggactgatatgcatcctcctctgcatg
tgttttagctttcgtaacagcaaatccagggatatatctgggggcctggactccacagct
gtgacccctcaatacaggagaggaggctgccccataccctccaacttgccagagtgcaac
gatagccatgagttggaaacactgatgcccccaggcagccaagagtctggtcagccgcta
gcagaggccccagaggagcagagcctgatggcaagtgctaatccaggggaaggggaggat
ggccctgcacctgaacccaaggctgcttggaacggctctgtgagtcataactgggccaac
agaatcactagatacagagacaccataacagaagactgtccaacactcattaacggagct
ctcaacatgctaattactgataacggcacgggcttagaagatcaactgtgtacatccctc
tgcagtaaccaggtggaggcagaagtcattgttcactctgagctgtcagatcctggaggg
gacaaagaggaagagggcagcgagagggagaaggattctaatgccaccaggggaccctca
ttatccgaggacagatattcccctttgagccagccaagcttgccaggagaggaggaacct
ctagaaaaactatcactggcgcaaagcccctcaagttttccctcgattaagttggtgggt
aatcataaccgggagctagatatcccaggagaccagccggttgcagtcatacagccacat
caggacatggggctgaccaatggcttccactcccctaagactgtgaggtctgtgctgagg
tcggagcatctggagaacggggactccagacactgcccttctgcaccagggaaggccatc
tctgtcgggctgtcccctgccccctttgtcagctccggctttgtccactctacctcagca
gcacacagttatctgtgcccgtag
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