Seriola dumerili (greater amberjack): 111219206
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Entry
111219206 CDS
T05606
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111219206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111219206
03036 Chromosome and associated proteins [BR:
sdu03036
]
111219206
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111219206
Coactivators
SAGA/TFTC/STAGA complex
111219206
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111219206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
111219206
NCBI-ProteinID:
XP_022597543
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNPAGKTDENGGAGSVAPANHHLGK
TLPAPVGTTTLEQQQQGRRNKPEMRQEINSKDVSPDKAVTSPSLGCTPSFGEPSTTSAAC
VNATSSGSQSHGASITTLTASGVSTLASPPASISTTSSRGSKVSPGTGETSTEANPARKR
ISQPRRTASARIKSLNGAAVTTRRNSNTAVVENASSVDPSETTPNSTRPVTSSINTSTFT
LSNASLPVGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTSVSALVQQGARIGPITSS
ASQENHSKTVTDTGASKTDDCQSKIVMSSQSGSVNSVINTVSSASSVVTTTTTTAAATTT
TTITQPLSSASIAACVTGVATSSVCGIGQTTSVTTTISMVRPTAPSPTPAVATSAQSQPR
PGLTAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALAQAQA
QAQAQAQNNISPRPATPTTGTSFRVTTPQVRLCYYLQFVLPVKHSCAEMVIFMSELSCDL
SDHQAVSFDPGQDGTISLSHSFQLCPPDLLLFLFFLLLLLSCAPPTMSTEKGPVAPAVAV
TAPQQTPVVMAPQAPAQAASQPVQPPQPPQTGIAAAPGASVVSQEMQENVKKCKNFLATL
IKLASHNSPSPETSKNVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPA
LRLSLLNSQQSLTQPPQQGVKPAPCGVPPAIVAGPAVRIRHPNSVSTTTGASALPAGTLG
HAAAMGIKTAGAVGGQVRMPVVITQSVRAQGTMGKGAVIQAGKCPVGLAVQVSGNQKNKL
NDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEAFLHPGLLHR
RILETAKKFGVTEVPMEAVTFISHATQSRLRTVVEKVSTIAQHRLDSCKDDECYEQSADV
RSQLRFFEQLERIEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMR
QRDANLTALAAIGPRKKRKVDSPGATPSGTEMLSSSSVPSTSSRQYTRQRITRVNLRDLI
FYMEQERETAHSLLLYRALLK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaggct
gtgagcgacctagtgggctcattggagtcacagcttgctggccaaagcaacccagcaggt
aaaacagacgaaaacggaggcgctggctcagtggcccccgctaaccatcacttaggaaaa
acgctaccagctccagtgggcaccacaacactagaacaacaacaacaaggacggcgtaat
aaacccgagatgcgccaggagatcaactctaaagacgttagtccggataaagctgtcaca
tctccttctctgggttgtaccccgtcttttggcgagccttccaccacttcggctgcctgt
gtgaacgccactagcagcggttcgcaatcacatggagcatccatcacaacactgactgca
tctggtgtgtcaactttggcatctcctccagccagcatcagcaccacatccagccgcggc
tctaaggtttctccgggcacaggtgagacgtcgacagaagctaacccggcgagaaaacgc
ataagccagccacggaggaccgcttcggctcggataaagagtttaaacggcgcagctgta
acgacgaggaggaacagcaacacagcggtggtcgaaaacgctagctctgtggatcctagt
gaaactacaccaaactctactcggccggtgacatcctctattaacacttcgactttcacc
ttatctaacgccagcttgcctgtaggtcagtcggctattgctctcgaccgggggactccc
accattgctttgcatagactcccgagtcacattgtagccagtatagcccagaacggcaac
gggaccagtgtttcggccttggtccagcagggcgctcgcataggacccatcacctcttca
gcttcacaggagaaccacagcaaaacggtcacagacactggggcttccaaaacagacgat
tgtcagtccaaaattgtaatgtcaagccagtctggtagtgtcaactctgtaataaacact
gtttcttctgcatcttctgttgtcacaacaacaacaactacagcagcagctacaacaact
actacaataacccagcctctgagctctgcctcaatcgctgcctgtgtcacaggggtggca
actagttctgtatgtggtattggtcagactacatcagtgactaccactattagcatggtc
agacccacagctccctctcccacacctgctgtggccacctccgcacagtctcaaccccgt
cctggacttacagcacctcaaaggatcgtagcccctcagctgattgtcagaccacctcag
cagcagacgaccattcagcttccccctgggtttaccatcccaccgggaatggtgttggtg
cgtacagagttgggccagctggtgatggttcctcagcaggctttggctcaagctcaggct
caagctcaggcccaggcccagaacaacatctctccacgacctgctacccccaccacagga
acatccttcagagtaacaactccacaggtgagactctgctactacctgcaatttgtttta
cccgtgaaacattcctgtgcagagatggtgatttttatgtcagagctctcctgtgacctc
tcagaccaccaggcagtgtcctttgaccccggccaagatggtaccatctccctctcccac
tccttccagctctgccctccagacctcctcctcttcctcttcttcctcctcctcctgctg
tcctgcgctccgcccacgatgtccaccgaaaagggccccgtggcgccggcagtggctgtg
acggctccgcagcagacccccgtggttatggcccctcaggccccagcccaggctgcctcg
cagccagtgcagcctccgcagcctccgcagactggcatcgcagcggcccccggagcctct
gtcgtgtcccaggaaatgcaagagaacgtgaagaagtgtaagaatttcctggccacactc
atcaagctggcgtctcacaattctccatcccctgagacttccaagaacgtcaaggctctg
gttcaggacctgctggatgccaagattgaaccggaggagttcaccagccggctgcagact
gagctcaagtcgtctccgcagccttacctggtgccctttctcaagaagagcctcccggcc
ctaaggctgtctttgctgaatagtcagcagtccctgacccagcccccgcagcagggagtc
aaaccagcaccctgcggcgtccctcccgccattgtggccggtccagctgtccgcatacgc
caccctaacagcgtcagcaccaccacgggtgccagtgcgctgcccgccgggacgctcgga
catgcagctgctatgggtatcaagacagcgggcgctgtcggcggccaggtgcggatgcct
gtggtgatcacacagtctgtcagagcgcaaggcacaatggggaagggagccgtgatccaa
gcggggaaatgtcccgtgggcctggctgttcaggtctcggggaatcagaaaaacaagctc
aacgaccccggaggaggctctttcagggatgatgatgacatcaatgacgtggcctccatg
gccggcgtgaacctgaacgaggagagcgccagaatactcgccaccaactcggagctagtg
ggaacgcaaatccgctcatgcaaagacgaggcctttctccacccagggctgctacaccga
cgaattctggaaacagctaagaagtttggagtcacagaggtccccatggaggctgtaaca
ttcatctcacacgccacacagtcacgacttcgcactgtggtagaaaaggtttcgactatc
gcacagcaccgactggactcctgtaaggacgatgaatgctacgagcagtctgcagacgtt
cgctctcagctccgcttcttcgagcagctggagagaatcgagaagcagaggaaggacgag
caggagagagagatcctgttgaaagccgctaaaagtcgctccaggcaagaggacccagag
caagctcgactgaaacagaaagctaaggagatgcaacaacaggaactggcgcagatgcgg
cagcgagatgccaaccttacagcactagctgccattggaccccgcaaaaaacgcaaggtg
gattcaccaggggccaccccatcagggaccgagatgttatccagctcctccgtcccgtcc
acctcatcgcgccagtacacgcggcaacgcatcactcgcgtcaacctcagggacttaatt
ttctacatggagcaggagagagagaccgcccactccctcctcctttaccgtgccctgctc
aagtag
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integrated database retrieval system
