Seriola dumerili (greater amberjack): 111219282
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Entry
111219282 CDS
T05606
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111219282 (smc5)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
111219282 (smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_13
FtsK_SpoIIIE
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
111219282
NCBI-ProteinID:
XP_022597629
UniProt:
A0A3B4U6E3
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MAEPSKRQRVSQVNSSSQTSSGTAITIKGSQRDGTGGDGRFVEGSILRITMKNFLTYDYS
VVCPGPNLNMIVGANGTGKSSIVCAICLGLAGKTTILGRGDKVGLYVKRGCHKGFIEIEL
CKNGGNIVINREIHVENNQSLWMMNGRHCNQKTVEEEVKALRIQVSNLCQFLPQEKVGEF
AKMSKIELLEATEKSVGPPEMYEYHCELKNFRNKERELENVVKERASFLEKAKQRNERNK
HDVNRYYEKKRHLDVIELLEKKKPWVEYETTRKELEGVKGERDEAKKQLAALKQAQTPML
RKIQQIENQLKPTEAQIKAKTTAIKEASNKCKQKQDQLDRKHKEIDDIKQTLRLKQMEEE
DHQKRISNTRRTIDDLKAELAKVGDQPDVTPRINAINIELRRIQEERAKIEGEKADLRRE
KDNLFAESRMLERKLNDMNNMMNAKEEKLRGRHRDTHVALQWLRQNKHQFGGNVHEPMML
VINVRDHRFAKYVENHISFHDLRAFVFQRKDDMEKFMIEVRDKMNLKVNSISAPEESCSK
RQPSRNIESLRRFGFFTYLREMFDAPDEVMSYLCHQYKVHDVPVGNEQTKAMIKTVIEEP
YLKVLYTTEERYSVKRSFYSNKISTSNSAVHPSQYLIITVDAEEKRQLEQQMKACELKLR
DIDERMKALQKEAAALDRSDNELLTEKKRLSELKGKKRQLEQKISTKQDSLRQMEQSVID
LKKIEEETKEKIASVNSQKVAIVSAFMAQMKLRAKLTMEKVYLALETVGLTAEKTKLEND
CREGATELKATDQKFNRLEQRKIQLTEHCKGLLKRAKSICRMQPDESLPEDLRNAFSKLP
DTLDEIDAMLNEERSRAECFTGLSESVVEEYNRRQQEIKNLEKELEDKSNALNAYRQNIS
EAKERWLNPLKQLVEQINDKFSDFFRSMQCAGEVDLHAENEEEYDKYGIRIRVKFHSSTQ
LHELTAYHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTAC
KETTSQYFFITPKLLQNLQYAEEMTILCVHNGAHMLPPNQWDEKAFIRRCLQRKAQA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccagcaaaagacagcgagtaagtcaagttaacagcagctcacaaacgtct
tccggcaccgccatcacgattaagggcagtcagcgcgatggaactggaggagacggtcgt
tttgtggaaggatccatacttcgcatcactatgaaaaacttcctgacctatgactactct
gtggtgtgtcctggacctaatctcaacatgattgttggagccaatggaactggcaagtcc
agcattgtttgtgccatctgtctgggtctggctggcaagaccactatcctgggcagaggc
gacaaggttgggctttatgtcaaacgtgggtgccataaaggatttattgagattgaactg
tgcaagaacggtggtaatatagtgattaatagagagatccatgtggagaacaatcagtct
ctgtggatgatgaatggaagacactgtaaccagaaaacagtggaagaggaggtcaaggct
ctgcgtatccaagtcagcaacctctgccagtttctgcctcaggaaaaagtgggagagttt
gccaaaatgtccaaaattgaattgttggaggcaactgagaagtcagtggggccaccagag
atgtacgagtaccactgtgagctcaaaaacttccgcaacaaagaacgagaactggagaat
gtcgtgaaagagagggctagcttcctggagaaggccaagcagaggaacgagaggaacaaa
cacgatgtgaaccgttactatgaaaagaagaggcatctggatgtgattgaattgcttgag
aagaagaaaccgtgggtggagtatgagaccacccgtaaggaacttgagggtgtcaaggga
gagcgagacgaggccaaaaagcagctcgccgcgctgaagcaggcccagacgcccatgctg
aggaagatccagcagattgaaaaccagctgaagcccactgaggcacaaataaaagccaag
accactgcgatcaaagaagcctcaaacaagtgcaaacagaaacaagatcagttggatcga
aaacacaaagagatcgacgatattaaacaaacactgagactgaagcagatggaggaggaa
gaccaccagaagcgaatcagcaacaccagacggaccattgatgacttgaaggcagagctc
gccaaagtcggcgatcaaccagatgtgacaccgcggatcaatgccatcaatatcgagctg
agacgcatccaggaggagagagccaagatcgaaggcgagaaggccgaccttcgcagggag
aaagacaacctctttgctgagtccaggatgttggagagaaagctcaatgacatgaacaac
atgatgaacgccaaagaggagaagctgcgaggacgccacagggacacacatgttgctctc
cagtggctcagacagaacaaacaccagtttggtgggaatgtccatgaacctatgatgctg
gtgatcaatgtgagagatcatcgctttgccaaatatgtggaaaatcacatctcattccac
gacctgcgggcgtttgtcttccagaggaaagacgacatggagaagttcatgattgaggtc
cgtgacaagatgaacttgaaggtcaactccatttctgctccggaggaatcgtgttctaag
cggcagccgtcccgaaatattgagtccctgaggcgttttgggttcttcacgtacctacgt
gagatgtttgatgctcctgatgaggtgatgagttacctctgtcaccagtacaaagtacat
gacgtccctgtgggcaacgaacaaaccaaagccatgattaaaacggtgattgaggagccc
tacctcaaggtgttatacacgacagaggagaggtactcagtgaagaggtccttctactcc
aacaagattagcaccagtaactctgcggtgcacccttcccagtacctcatcatcactgtt
gacgctgaagagaaacggcagctggagcagcagatgaaggcgtgtgagctgaagttacga
gacatcgatgaacggatgaaggctctgcagaaggaagcggccgccctggatcgcagcgac
aatgaactgttgacagagaagaagcgtctctcggagctaaagggcaaaaagagacaactg
gagcagaaaatcagcaccaaacaggacagtctcaggcagatggagcagagtgttattgac
ctaaagaaaattgaagaggagacaaaagagaaaatagcgtctgtcaattcccagaaggtg
gccatagtctcagcattcatggctcaaatgaagctgagagccaagctgacaatggagaag
gtgtacctggccttggagacggtggggctgacggcggagaagaccaagctggagaacgac
tgcagagaaggcgccactgaacttaaggcaaccgatcaaaaattcaaccgtctggagcag
aggaagatccagctgacagaacactgcaaaggcctgctgaagagagcaaagtccatctgc
aggatgcagcctgacgagtcattacctgaagacctgcgtaacgctttcagcaagctgccc
gacacactggacgagattgatgccatgctgaacgaggagcggtccagagccgagtgcttc
actggcctcagtgaaagtgttgtggaggagtacaacaggagacagcaggaaatcaaaaat
ctggagaaagagctggaagacaagagcaacgccctgaacgcctaccggcagaacatatca
gaggcgaaggaacgctggctgaaccctctgaagcaactggtggaacagataaatgacaag
ttcagcgacttctttcgttccatgcagtgtgcaggagaggttgatctgcacgcagagaac
gaggaggagtatgacaaatacgggatccgtatccgggtgaagtttcacagcagcactcag
ctccacgagctgacggcgtaccatcagagcggaggagagcgcagcgtctccacaatgctt
tacctcatggccctgcaggagctcaaccgctgccccttcagagtggtggatgagatcaac
cagggaatggatcctgtaaatgagagaagagtctttgacattgtggtccgcacggcctgc
aaagagacaacatcccagtacttcttcataacacccaaactgctgcagaatcttcagtac
gccgaggaaatgaccatcctgtgcgtccataacggcgcccacatgcttcccccgaaccag
tgggatgagaaggctttcatcagacggtgtctccaaagaaaagcccaggcatga
DBGET
integrated database retrieval system
