Seriola dumerili (greater amberjack): 111219312
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Entry
111219312 CDS
T05606
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111219312 (dhx35)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111219312 (dhx35)
Spliceosome [BR:
sdu03041
]
Complex C
Other components
Complex C specific factors
111219312 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
111219312
NCBI-ProteinID:
XP_022597667
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MAAPLATMKFWKPGSEAPGISEERELNTETTGSPIIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNETADPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVMKIHETEDDGDVLAFLTGQEEVEKVVSLLQDQARSLS
RYGMKKHLRILPMYSGLPYAEQMKVFERAPSSVRKVVVATNIAETSITINGIVFVIDCAF
VKLRAYNPSTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPTGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPPNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVSGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTS
KYYMRDVTAAESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctcgccacgatgaaattttggaagccggggtctgaggcaccggggatc
tcagaggagcgggagctcaacacagagaccaccggctcccccatcatattcaacccgcac
accgccctctctatagagaaacaacgacagaaactccctgttttcaagcacagaaacaac
atcttgtacttggtggagagttaccagacggtcatcatagttggtgagacgggatgtggg
aagacaacacagatacctcagtacctgctggaggctggctgggcagcagaggggaaggtg
attggagtgacacagcctcggcgtgtggctgctatctctgttgcaaaccgtgttgcagag
gagcggggagccctgctgggacatgaggtggggtacaccatccgattcgatgactgttct
gatccccatgccacaaggatcaagttccttacagatggcatgctggtgcgggagatgatg
gctgatcctcttttgaaaaaatacagtgtgttaatgctggatgaagcacatgagagaacc
ctgtatacagacatagccattggtctacttaagaagattcagaagaagcggcgagacctg
cggctgattgtggcctccgccactctggatgccaagaaattccatgacttcttcaacctg
aatgagactgcggatccgaacaaggacacatgtggtattctgacagtggaaggacgcacc
tttccagtggacgtcttctacactgtcagtcctgtcccagactacgtgaaggccacagtg
gagacagtgatgaagatccatgagacagaagatgatggagatgtcctggcttttctaact
ggacaggaagaggtggagaaggtggtgtcgctgctgcaggaccaagctaggtctctgtca
cgatatggcatgaaaaaacacctgagaattttgcccatgtactctggtctaccatatgct
gagcaaatgaaggtctttgagagggcgccttcctctgttcgcaaggtcgtggtggctact
aacatagctgagacctccatcactataaatggaatcgtattcgtcatcgactgtgcgttc
gtgaagctgcgagcctataatcccagcactgccattgaatcactggtggtcacccccatc
tccaaagcttcagccagtcagagggctgggagagccggaagaaaccgacctggaaaatgc
tttagactttacacagaggaggactttgagaaactgcctgcctctactgtgccagagatg
cagcgcaccaatttggcccctgtcatcctgcagctcaaagcattaggcatcgacaacgtg
ctgcggttcagcttcctttctcctcctccagctcagaccatggtccaggctctggaactg
ctctacgctctgggaggtttggaccattacggccgtttgactgatcccacgggtgtgcgg
atggcagagtttcctctcagccccatgtttgccaagatgctcctagagtcagggaacttt
ggctgctccaaagagattgttactatagcagcgatgatgcagattcagaatatatttgtt
gtgccacccaatcagaagaaagctgccgcccgagagcacaggaaattcgcagtcgctgaa
ggagaccacctcaccatgctgaatgtgtatgaagcgttcattaagcaccagaagagctcc
cagtggtgtcaggaacattttctcaactacaagggtctgctgcgggccgtgactgtacga
gagcagctgcggcgtctcatgaacaagtttaaggtgccacggacttccagtgaaggtgat
cctgatgtgatcctgaagtgcattgtatctgggtttttcgctaatgcagcccgcatccac
cattctggttcctacaggactttacgagatgaccgtgagcttcacatccaccccaactct
gtgcttttcggagaaaaacctccaaaatgggttgtcttcaatgaagtggtgcagacatca
aaatactacatgcgtgatgtgactgctgctgagtcgtcctggttggttgagttggcccct
cacttttacaagcaggccaagcatggttcactggccagcaagagatcccgggtcctctaa
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