KEGG   Seriola dumerili (greater amberjack): 111219384
Entry
111219384         CDS       T05606                                 
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sdu03036]
    111219384 (rbbp5)
Chromosome and associated proteins [BR:sdu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     111219384 (rbbp5)
    COMPASS/SET1 complex (yeast)
     111219384 (rbbp5)
    MLL-HCF complex
     111219384 (rbbp5)
    MLL3/MLL4 complex
     111219384 (rbbp5)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_Aladin WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_IFT140_1st EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_LRRK2 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st WDR54 Beta-prop_WDR11_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_EMC1_N
Other DBs
NCBI-GeneID: 111219384
NCBI-ProteinID: XP_022597758
LinkDB
Position
Unknown
AA seq 564 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
NTQELVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTTVDPIVAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DASVQTSAPEDALAGGDKKQRQPSSDGGPAKKKARTTTIELQGVPSDEVHPLLGVKGDGK
SKKKAAGRPKGSKGKDKDFPFRPKPYRGERPSFPVEALGSSGPGVGVGGGGGGGGGMKGR
AEGGLAPGSLVSQSYKQHDIGGMD
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgaatctagaactgctcgagtcgttcgggcagaactacccagaggaggcagatggcact
ctggactgtatcagtatggccctcacctgcaccttcaaccgctggggcaccctgctggct
gtgggctgcaacgatggccgcatcgtcatctgggacttcctcacacgggggatcgccaaa
atcatcagtgcacacatccacccagtctgctctttatgctggagtcgagatggccacaag
ctagttagtgcctccacagacaacattgtctcacagtgggatgtcctgactggagactgt
gaccagagattccgtttcccctcacccatcctgaaactgcagtaccacccaagagacatg
gacaaggtgctggtgtgtcccatgaagtcagccccagtcctgttgactctctcggactct
aaacatgttgtcctgcctgtggacgatgactcagacctgaatgtggtagcagcctttgac
cgacggggcgagtacatctacactggcaatgccaaaggaaagatccttgtgttgaacaca
aacacccaggagctggtggcgtccttcagagtgaccactggcaccagcaacaccactgcc
atcaaatccatcgaatttgcacgcaagggcagttgcttccttataaacacagcagacagg
atcatcagagtgtatgacggcagggagatactcacctgtggccgagacggtgaaccggaa
cccatgcagaaactgcaggacctggtcaacaggactccgtggaagcgctgctgtttctct
ggggatggcgagtacatcgtggccggttcagccagacagcacgccctctacatctgggag
aagagcatcggcaacctggtgaagatcctgcatggaaccagaggagagctgctgctggat
gttgcttggcatcctgtccgtccaattatcgcctctatctccagtggagtggtgtccatc
tgggctcagaaccaagtggaaaactggagtgcgtttgctccagacttcaaagaactggat
gagaacgtggagtacgaggagcgagagtctgagttcgacatcgaggatgaagacaagagt
gaacctgagcagacaggcgcagacgctgcagaggatgaagaggtggatgtcaccactgtc
gaccccatagttgctttttgcagcagtgatgaggagcttgaggactataaggccttgctg
tacctgcctattgcccctgaagttgaggatccagaggaaaaccccttcggccccccaccg
gatgcctcggtccagacttctgccccagaggacgcattggctggcggtgacaagaagcag
cgacagccttcatctgacggaggcccagccaaaaagaaagcccgcaccaccaccatagaa
ctgcagggggtgcccagtgacgaggttcaccccctacttggtgtgaagggggatggcaag
tccaagaagaaggcagcaggtcggcccaaaggttccaaaggtaaagacaaagacttcccc
ttcaggccgaagccctacaggggcgaacggccctccttccccgtggaagccttgggcagc
tctggcccaggagttggagttggaggcggaggaggaggaggaggagggatgaagggcagg
gcagaggggggcctggccccagggagcctggtctcacagtcgtacaaacagcatgacatt
ggagggatggactga

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