Seriola dumerili (greater amberjack): 111219470
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Entry
111219470 CDS
T05606
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111219470 (fxr1)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111219470 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
111219470 (fxr1)
mRNA cycle factors
Stress granule specific factors
111219470 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
111219470
NCBI-ProteinID:
XP_022597914
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MEELAVEVRGSNGAYYKGFVKDIHDDSLTIAFENNWQPERQVPFSDVRLPPPADAKKEIG
EGEEVEILSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNPNKA
ITKNSFHKCSVPVPQDLQEACQSENAHKDFKKAVGACRISYCPETSQLVIVSTNESTVKR
VSLLSDMHLRSIRTKLLLMSRNQEATKHLESSRQLVSSFQEEFMVRPDLMGLAIGSHGSN
IQQARKVPGVTAIELDEETGTFRIYGETAEAVKKARNYLEFLEDSVQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDTKQPRQELTQGMVPFTFVGTKESIGNVQVLLEYHISY
LNEVEQLRLERMQIDEQLRQITQGHRPADRERGERGERGGGYNTDSSANASSSSLHATRS
YNSRGRGRRGHSYSTGYGTNSEQSNASETDSERKDELSDWSLAGEDQDRERERGSRPQRD
GRRRPGPGRGRGGPGGRGRGGRGYSNSSAGPQDHEDNHAYAVLETNTETDQTADTDASES
NLPANRRRRSRRRRTDEDATLMDGMSESDNASMSENGIDDSEAKPQRRNRSRRRRIRLPE
ERQPVTVADYISRAESQSRQMTTNEPKKNMDVGQVEAIAEHSPQPAPATTNGSNNNAADS
EGSDAAGAPRSSTERPAKVSYKEDSNPQTVVNGLS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggcggtggaggtccgtggctccaacggggcttattacaagggctttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaattggcagccagaacgc
caggtgcccttcagtgatgtcaggttgccaccgcctgctgacgccaagaaagagattgga
gagggcgaggaggtggagatcctctccagagccaatgaacaggagccttgtggttggtgg
ctggctaaagttcgcatgatgaagggagatttctatgtgattgagtacgcggcctgcgat
gccacctacaatgagatagtgacctttgagcgcctgcgtccagtaaaccccaacaaggcc
atcaccaagaattcctttcacaagtgctctgtccctgttcctcaggatctacaagaagcg
tgccagagtgagaacgcccataaggacttcaagaaagctgtgggagcctgtcgcatctca
tactgccccgagaccagccaactagtgattgtgtccaccaatgagtcaacagtgaagcgt
gtgtctttgctgagtgacatgcacctgcgcagcatcaggaccaagctgctgctaatgtca
cgcaaccaggaggctacaaaacacctggagagctctaggcagctggtgtcatccttccag
gaggagttcatggtaagaccggatctgatgggcctggccatcggcagccacggcagcaac
atccaacaagctcggaaagttccaggtgtcactgccattgagctggatgaggagactggc
actttcaggatttatggagagacagcagaggcagtaaagaaggccagaaactacctggag
tttctggaggattctgtccaggtgccaaggaacctcgttggcaaagtgatcggtaagaat
ggtaaggtcatccaggagattgtggacaagtctggagttgtgagggtcaggatagaagga
gacaatgacaccaagcagccccgacaggaattgacacagggaatggtccccttcaccttt
gtcggtactaaggagagcattggcaatgttcaggttttgctggagtaccacatctcttac
ctcaatgaggttgagcaacttcgtctggagcggatgcagatcgacgaacagttacgtcag
atcacccagggtcaccgaccagctgacagggagagaggagagaggggcgagagaggagga
gggtataatacagacagcagtgccaatgcctcctcatcctccttacatgccactcgctcg
tacaacagtcgcggccgtgggcgcagaggacacagctacagcactggatatggcaccaac
tcagagcagtctaacgcctctgagactgattcagagcgtaaggatgaactcagtgactgg
tccctggctggagaggaccaggacagggagagggagagaggctctaggccacagagagat
ggtcgcaggaggccaggacccggcagaggccgcggagggcctggaggaaggggaagagga
ggaagaggatacagcaatagttctgcggggcctcaggaccacgaggataaccatgcctat
gcagtcttggagacaaacacggagacagaccagacagccgacactgatgctagcgagtcc
aacttgcctgcaaaccgccgcagaaggtctcggcgacgcagaacagatgaggacgccaca
ctgatggatggcatgagcgagtctgacaacgcctcaatgagtgaaaatggaatagatgac
tcggaagctaaacctcagcgtcgtaaccgtagtcgacgtcgccgcatccgcctgcctgag
gagaggcagccagtgactgtggctgattacatatccagggccgaatctcagagcaggcag
atgaccaccaacgaacccaagaagaacatggatgtgggtcaggtggaagccatcgctgag
cacagcccgcaacctgccccggcaaccaccaatggttccaacaacaatgccgccgacagt
gagggcagcgatgccgccggagctcccaggtcttccaccgagaggcctgccaaagtctcc
tacaaggaggactcaaacccgcagactgttgttaatggactttcctag
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