Seriola dumerili (greater amberjack): 111219492
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Entry
111219492 CDS
T05606
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdu01001
]
111219492
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111219492
Enzymes [BR:
sdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111219492
Protein kinases [BR:
sdu01001
]
Serine/threonine kinases: Other
Other
111219492
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111219492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
LisH
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WAPL
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
111219492
NCBI-ProteinID:
XP_022597900
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MPRRRASLRLMAAMSSPEEEPTAALSSALSAAVSAAMAIAMAVDAKANLATLLDEWEEAQ
HGTTEKLVSILTKISELIERETGEYHKADPDPFDDRHPGRADPDCMLGQLLKMLFMNDDF
TNALLDTYIMTSRELNLNTAACRLLQNIMPGLETAVVFQEKEGLVEKLFSWAHEAERPLC
VYATGLLARAMSNQEVATSYREENTRLVPVMIRRLHELQTEEAKNLLSPTKTPQNLPQDS
QVEATQTSGISTDRDKTEGGAVGEEEDRKERDGESSRTKAKPLSLLGSALKNGGCSGGPS
STRLLPDFVYQASPDPQASRETDDKQGGGGGGGGGKKRAVKENGRKAKQKLNFTSGSSNK
ADEEAERTDASNQPGNSSSWSEMSSMVIGSDYCLCPLSPAMEQRLILQYLTPLGDYQELL
AVFMQLDTRSLLMNYIDLRQTKNVQLIFDALLYLASLLLHKKFAAEFIAHGGVQRLLEIP
RPSMAATGVSLCLYYLAYNQDAMERVCMLMDGVLSDMVSYALWLLESSHASGVCHATMFF
SISFSFRAVLQLFDNQDGLRRLVNLVSTLEILNMENEVSMVSDDQVFSSRQTAKHTCMAL
RRYFEAHLAVKAEQVKQSLHTSDEGTIVPQQPFYKAYTYTREQVIEMMEFLIECGPPQLQ
WEPVEVFYKLSCVPLMLQLISTACDWRTYYGRSDTVRYALDILAILTVVPKVQLVLADTV
DILDETRSLVSTVGMSIILGVAEGEVFVNDAEIQKSALQVIINCVCAPDQSLNTVGAFAV
TPLRPSLHPQQPPAPHNRVLAHMWQVVQNNNGIKVLLSLLSVKMPITDADLIRALSCKAL
VGLSRSSAIRQIISKLPLFTSGHIQQLMKEPVLQDKRSEHVRFCRYAAEMTERVSGKPLL
MGTDVSLARLQRANVVAQSRITFSEKELLMLIRNHLVAKGLHDTANTLVKEANLSVGSLC
PNSSSCVTPPPSPSPLIPRTCRLAGGIAARVASHVGSSPVSSVTAVSSTSSLPPSRTLIS
PHPSCSSLPAAAHPPPPPPPTPHPPHAGQGSHLAGRILFTRERPVASSNSGKKLRALKQK
SDHGAFIQTPAMKKQLERHLPSPPTLDSIITEYLREQHARCPNPVTTCPPFSLFTPHRCP
EPKQRRQASPNFTARLGSRVLYPKYGGVDRACLDRHLIFSRFRPMSVFHEGDGDESGFTC
CAFSARERFLMLGTCSGHLKFYNVFSGEEEANYTCHTSAITHLEPSRDGKFLLTSASWSV
PLSALWSMDGVFSLKNSFVDDHYVEFSKLSQDRVIGTKDQVAHIYDIQTGQKTLTLNDPA
LANNYKRNCATFNPTDDLVLNDGVLWDVRVSRAIHKFDKFNMNISGVFHPNGLEVIINTE
IWDLRSFHLLHTVPALDQCRVVFNSNATIMYGAMLQADDEVDAMDQQMKSPFGSSFRTFD
ATDYKPIATVDVKRNIFDLCTDNKDCYLAVIENQDTVSLDMVCRLYEVGRQKLAEEGDDD
DEDDEDQDDDDSSDTDDDDDDDDDDDMDTDPLMEELANNDNRENGDRGNSPTDEEIADLL
GSNSDDDNNNDDDDDDSEDSDNSYRSDEGSDLLGNMDYYPRSSDEDTQFLRSIHDGWFS
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgacggcgagcctcactcagactcatggcagcgatgtcttccccagaagaagag
ccaacggctgccctgtcgtccgccttgtcggctgctgtgtcggctgccatggccattgct
atggctgtggacgccaaggcgaatctcgccacactgctggacgaatgggaagaagcccag
cacggcaccacggagaaactggtgtccatcctcactaaaatatcggagctgatcgaacgg
gagacaggagagtatcacaaagcagaccctgatccgttcgatgaccgtcacccaggacgg
gcggacccagactgcatgctgggacaactcctgaagatgctctttatgaatgatgacttc
accaatgcgctgttggacacgtacataatgaccagcagagagctgaacctcaacacagcc
gcctgccgtctgctccagaacatcatgccgggtctggagacggccgtcgtcttccaggag
aaggagggtctggtggagaagttgttcagctgggctcatgaagccgagcggccgctgtgc
gtctacgccacggggctgctggccagagccatgagcaaccaggaagtggcaaccagctac
agagaggagaacactcggctggtgccggtcatgatccgacgcctgcatgagctgcaaacc
gaagaggccaagaatctcctcagtcccaccaagaccccccagaatctacctcaggactct
caggttgaagccactcagacctcaggcatctcgacggaccgagacaagacggaggggggg
gctgtgggagaggaggaagacagaaaagagagagacggagagagcagcaggacgaaggcc
aaacctctgtccctgctcgggtcggccctgaaaaatggaggctgcagcggtgggcccagc
tccacccggctgcttccagactttgtgtaccaagcgagcccggaccctcaggcctccagg
gagacggatgacaaacagggaggaggaggaggaggaggaggagggaaaaaacgggcggta
aaggagaacgggaggaaggctaagcagaagctcaacttcacctccggctcgtccaacaag
gccgacgaggaggcggagaggaccgacgccagcaaccagcctggcaacagctcctcctgg
tctgagatgagctcgatggtgattggctccgactactgcctctgcccgctgagcccggcc
atggagcagaggctcatcctgcagtatctgacgccgctcggagattaccaggagctgctc
gccgtcttcatgcagctggacacgcgctcgttgctgatgaactacatcgacctgaggcag
accaagaacgtccagctcatcttcgacgcgctcctgtatctcgcctcgctgctcctccat
aagaagtttgcggcggagttcatcgctcacggaggagtgcagagacttctggagatcccg
aggccgtctatggcagcgactggagtttcactctgcctgtactatctggcttacaaccag
gacgctatggagagggtgtgcatgctgatggacggcgtgctgtcagacatggtgtcctac
gctctctggctgctggagtcgtcccacgcttcaggcgtctgccacgccaccatgtttttc
tccatctctttctccttcagggccgtgctgcagctcttcgacaaccaggacggcctgcgg
cggctcgtcaacctggtcagcactctggagatcctcaacatggagaacgaggtgtccatg
gtgagcgatgaccaggtcttctccagccgacagacggccaagcacacctgcatggccctg
cgcaggtactttgaggctcacctggcggtaaaggcagaacaggtgaagcagtctttgcac
acatcagacgaaggcaccattgttccccagcagccattttacaaggcgtacacgtacacc
agagagcaggttattgagatgatggagtttctgatcgagtgcgggcctcctcagctccaa
tgggaaccggtggaggttttctacaagctgtcctgtgttcctttaatgctgcagctcatt
tctacggcctgcgactggaggacttactacggcaggagtgacacagtgcgttacgccttg
gacatcctcgccatcctgacggtggttcccaaagtccagctggtgctagcggacacagta
gacattttggatgaaaccaggtctcttgtttccactgtgggtatgagcatcatcctgggc
gtcgcggagggcgaggtgttcgtcaacgatgccgagatccaaaagtctgcgctacaggtg
ataataaactgtgtgtgcgctccagaccagagcctgaacacggtgggtgctttcgctgtc
acccccctcaggccgtcccttcacccccagcagccgcccgccccccacaacagggtgctg
gcccacatgtggcaggtagtgcagaacaacaacggtataaaggtgctgctgtctctgctg
tcggtgaagatgcccatcacagacgcagacctgatccgagctctgtcctgcaaggctctg
gtcggactctctcgcagctcagcgatcagacagatcatcagcaaactaccgctgttcacc
agcggccacatccaacagctgatgaaggagccggtgctgcaggacaaacgcagcgagcac
gtgcgattctgccgctacgccgccgagatgacggagcgagtgtccgggaagcctctgctc
atgggtaccgacgtgtcattggctcgtctgcagagggccaacgtggtcgcccagtcgcgg
atcaccttctctgagaaggaactcctcatgctgatcaggaaccaccttgtggcgaaaggg
ctccacgacacggcgaacacgctcgttaaggaggcaaatttatccgtaggatccctttgt
ccgaactcttcctcctgcgtcacccctcccccctccccctccccactgatccccaggact
tgccggctcgccggcgggatcgcggctcgtgttgccagccacgtcggatcctctcccgtg
tcctcggtcaccgcggtctcctccacctcgtctctgcctccctcccgcaccctcatcagc
cctcacccctcatgctcctctttacccgccgctgcccaccccccccctcctcctcctcca
actcctcatcctcctcatgctgggcagggctcacatctggctggccggattttgttcaca
cgggaacgcccagtggcgtccagcaactcagggaaaaagcttcgcgcgctgaagcagaag
tctgaccacggtgctttcatacagactcctgccatgaagaagcagctggagcgccacctt
ccttcccccccgacccttgacagcatcatcaccgagtacctgagggaacaacacgcccgc
tgccccaatcctgtcaccacctgcccccccttctcccttttcaccccccaccgatgcccc
gagcccaagcagaggcgacaggcgtcgcccaacttcacggcccgcctggggagcagggtg
ctgtacccgaagtacggaggagtggacagagcgtgtctggacagacatctgatattcagc
aggtttcgtccgatgtcggtcttccacgagggcgacggagacgagagcggcttcacctgt
tgtgccttctcagcccgcgagcgtttcctgatgctggggacctgctccggtcacctcaaa
ttctacaacgtcttctccggagaggaggaggccaactacacctgccacacgtcagccatc
acacacctcgaaccctccagggacgggaaatttctgcttacctctgcttcctggagcgtc
ccgctgtcggccctctggagtatggacggtgtctttagcttgaaaaactcatttgtggac
gatcactacgtcgagttcagtaaactctctcaggacagagtcatcggcaccaaggaccaa
gtcgcacatatctacgacatccagacgggtcagaagactctgaccctgaacgaccccgcc
ctggccaacaactacaagaggaactgtgccaccttcaaccccaccgacgacctggtgctg
aacgacggggtgctgtgggacgtgcgggtgtctcgggccatccataagttcgacaagttc
aacatgaacatcagcggcgttttccatcccaacggcctggaggtcatcatcaacactgag
atttgggacctgaggtccttccacctcctgcacactgtccctgccctggaccagtgcagg
gtggtcttcaacagtaacgccaccatcatgtatggagcaatgcttcaagccgatgatgag
gttgatgccatggaccagcagatgaagagtcccttcggctcgtccttcagaacctttgat
gctacagactacaagcccatcgccacagtggacgtgaagaggaacatctttgacctgtgt
actgacaacaaagactgctacctggctgtcattgagaaccaggacacggtgagtctggac
atggtgtgtcgtctctacgaggtgggacgacagaagctggctgaagagggagacgacgac
gatgaggacgacgaagaccaggatgatgatgattcttcagacacagatgacgatgacgac
gacgacgacgatgacgacatggacacggacccgctcatggaggagctggccaataacgac
aaccgggaaaacggggaccgaggcaactcccccacagacgaagagatcgcagatcttctc
gggagcaacagcgacgatgacaacaacaacgacgacgacgacgatgattcagaagattca
gacaactcgtacagaagtgatgagggatctgacttactgggcaacatggattactaccca
cgatcctctgatgaggacacccagttcttgcggtcgatccatgacgggtggttctcctga
DBGET
integrated database retrieval system
