Seriola dumerili (greater amberjack): 111219894
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Entry
111219894 CDS
T05606
Symbol
irx5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111219894 (irx5)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
111219894 (irx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
111219894
NCBI-ProteinID:
XP_022598460
UniProt:
A0A3B4TQ86
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGTYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLLNPGDIGCDRFKEESHGKDT
DPLLSDSELKDQEERTTDLLPDSSKPTTSSPSAVPRGNQTVAQQDKPSDLSHAPGTVTSN
VTSVIHSPPSAPKPKLWSLAEIATSSDRCKGSGEAPQACPGLGQSAVMGTNASPSRSSPQ
CPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVTTGSTAHFNGLNQTVLNRAE
ALVRESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcttctttagccctgtattcatgc
cctgcgtacagcaccagcgttatatccggacccagaaccgaggaacttgggagatcctct
tcgggatctgcttttgcgccctatgccggatctactgcgttcaccagcgcctcgccaggc
tacaactcccacttaccatacagtgcagacgcggcggcagctgccacattcacctcgtac
gtgagttctccctatgaccacactacgggtatggcgggctcaataggataccacccttac
gcagcacccttgggcacctacccttatggtgacccagcataccgtaaaaacgcaacccgg
gacgccactgccaccctgaaggcctggctcaatgagcaccgcaaaaacccctaccccact
aagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtgtccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggaccccccgg
aaccggagcgaggacgaggaggaggacgagaatattgatttggagaaaaatgacgacgac
gagccaaacaagcccacagacaagggagactccacagacacagaagcagatcataaactg
ctgaacccaggggacataggctgcgacagatttaaagaggagagccatggcaaagacacg
gatccccttctgagcgactcggagttaaaagaccaggaggagcggactacagacttgctg
ccggattcctcaaaaccaaccacttcgtctccctcggcggtgccccgggggaaccagacc
gttgcgcaacaagacaagccgtcagatttgagccatgcaccgggtacggtgaccagcaac
gtgacctctgttatccactcgcccccctcggcccctaaaccaaaactgtggtcccttgcg
gagatcgccacgtcctcagacaggtgtaagggcagcggcgaggcgccacaggcttgtccc
ggtttgggtcagagcgcagtaatgggcaccaacgcgtctccatcacggtcctcccctcag
tgcccgctccccaacagcacggtcctatccaggcctctgtactacacctcccctttctac
cccggctacacgaactatggtggcagctttggacaccttcacagtaaccacggctcggta
accacgggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagag
gctttggtaagagagagccagaaagtcagaggccaaacgcaggtagatctttgtaaagac
tccccttatgaactaaagaaaggtatgtcaaacatttaa
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