Seriola dumerili (greater amberjack): 111219903
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Entry
111219903 CDS
T05606
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111219903 (mms19)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111219903 (mms19)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111219903 (mms19)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
111219903 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
RTP1_C1
HEAT_2
TOR1L1_N
CLASP_N
HEAT_ECM29
Sec7-like_HUS
PP4R3
API5
Motif
Other DBs
NCBI-GeneID:
111219903
NCBI-ProteinID:
XP_022598469
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MAADSALLLSLVEEFVSGLQDSKAKDTATGVKDGQFTVLQLVEALGLSLMSSQPHTRARG
VKLLSEVLHECYGNLTEAEVEVLIAFYENRLKDHYVITPPVLQGLRALTKCTVLPPGSAV
SMLRSLFQDVHVQSLMLAERSCVYNMLINLMETREAELKGLGTDFVFGFVQSMDGERDPR
NLLLAFQIAKNIIHRGYDLGKFAEELFEVTSCYFPIDFTPPANDPHGITKEELIEELRAV
LTGTPKFAEFLLPLIIEKLDSDVQSAKQDSLQTLTACVSQYEHKDLAEFLEGLWASLRRE
VFQTSSEKIESAGLTALTALTSCLSRSVLSSDSEDSLSTFLDMVLEDCKHHLSELDLKLV
WPSAKLLQAACSASNRASHIITAAVMPSLIEQYSSRTQCSHRRTLLEVVLRFIQSVKTSQ
ASENEERVFSAFRESLCSMVFSALTETNTSLQITATSMLTSLAQQPGLLLDSDIELALDH
LTRLLLTEEDDGVSLAVVKCAGALAELHPAAFITKLIPRLKTELFDEPMDQDGNREASEQ
HSHHAVRQRCLSALAAVSTQPSVVWESTPVLLEVLGSAHTGSVCFSVEEVVLACRSLQRI
AERVQDTEETGQCFHEIIIPRLLSLALQAALQGEGSSGRSPLVEEVVLSAMVPVISTACS
RLQPTLAGQTASRAVSLFLDGDVSFLPDNSFPSQIQLLKKQQGDSWSQSQMVCLLIGCVC
SLPRSVEVPQIDQLLSQLEEMSCTCSHPLSYTSAAKCFAGLVNKRSEGDSLHSLIQSTMK
KVCRELHSTSSPVRTQAFTLLIWVSKALLLRYHPLSIVLTDKLFSLLDDADLGPMAADGF
SMLMSDSADVLNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIVNK
LPKQVQVTELPALLSLLLEALSCPDQGVQLSTLSCLEPVLIDPPPALIQQLEALVSRLLA
LICSPTMTVRIASLHCIHALSRFPEHEILPFRARVLRALARPLDDKKRLVRSEAVQARAE
WFLLGSPGGR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacagtgccttgctgctgtctctggtggaggaatttgtctcgggactacaa
gacagcaaggccaaagatacagcaactggtgtcaaagatggacagtttacagtactgcag
ctggtggaggcactgggactgagtttgatgagttctcagcctcacactcgagccagagga
gtcaagctgctgtctgaggttttgcatgagtgctatggaaatcttacagaggcagaagtg
gaagtgctgattgctttctatgaaaaccgtctaaaggaccattacgtcatcactccacct
gtcttacaggggctcagagctctgacaaaatgtacagtgttgcctcctggctcagctgtg
tctatgctgaggtctttgttccaggatgttcatgtacagtctctgatgctggctgagaga
tcgtgtgtctacaacatgctcattaacctcatggagaccagagaggctgaactgaagggt
ttggggacagattttgtgtttggctttgtccagtcgatggatggagagagggatcctcgt
aacctcctgttagccttccagattgcaaagaacatcatccaccgaggctacgatctaggt
aaatttgcagaggagctgtttgaagtgacgtcctgctatttccccatcgacttcacccca
cctgccaatgacccccacggcatcaccaaagaggaactaattgaggagctgcgggccgtc
ctcactgggacaccgaaatttgctgagtttctgttgcctctcatcattgagaagctggac
tcagacgttcagagcgccaagcaggactcgctgcagactctgaccgcctgtgtgtcacag
tacgaacataaggacttggcagaattcctcgagggactgtgggcatcactgcgcagagag
gtgtttcagacatccagtgagaagatcgagtctgcaggcctcactgctcttaccgcactc
acttcctgtctgtctcgctcagtcctcagctctgactctgaagactccctcagcaccttc
ctggatatggttctcgaagactgcaaacatcacctgtctgagctggacctgaagctcgtg
tggcccagtgccaagctgctgcaggccgcctgcagcgcctccaacagggcgagccacatc
ataacagcggcagtcatgccctcgctcatcgagcagtacagcagcagaacgcagtgttcc
catagacggacgttactggaggttgtgctgcgattcatccagtcagtaaaaaccagccag
gcctcagagaacgaagagagagtgttttcagccttccgcgagtctctgtgcagcatggtg
ttttcagctctgacagagactaacaccagtctgcagatcacagccacctcgatgctcacc
tcactggcgcagcaaccgggtctgctgttggactctgacattgagctggctctagatcac
ctgaccagactgctgctgacggaggaggatgacggagtcagtctggctgtggtcaagtgc
gccggagccttagcagagctgcacccagcagcctttatcactaaactcatcccgagacta
aagacggagttgtttgatgagcccatggatcaagacggcaacagagaagcttctgagcag
cattcccatcatgcagtgcgtcagcggtgtctgtctgctctggcggcggtgtccacccaa
cccagtgttgtgtgggagagcacacctgtcctcctggaggtcctcggctcggcacacaca
ggtagcgtctgtttctcggtggaggaggtggtgttggcgtgccgcagcctccagaggata
gcagagcgggttcaggacactgaggagacaggacaatgcttccatgaaatcatcatcccg
cgcctgctctcattggcactccaagcagcactgcagggtgaggggtcctctggtcgtagt
cctctggtagaggaggtggtcctgtctgctatggtccctgtcatcagcaccgcctgctcc
aggctacagccgacgttggcgggacagacggcgtcaagggctgtctctctcttcctggac
ggtgacgtctcctttttgcctgacaactccttcccttcacaaatccagctgctcaagaag
cagcagggggactcgtggagccagtctcagatggtttgtctgctcattggctgcgtgtgt
tcgttacctcgcagtgtggaggtgccccagatagaccagctgctgtcacagctggaggag
atgagctgcacctgcagccacccgctgtcatacacctctgccgccaagtgctttgctggg
ctggtcaacaagcgatcggagggtgattctcttcacagcctgattcagagcacgatgaag
aaagtgtgtagagagttgcactccacatcttcacctgttcgcactcaggcattcaccctc
ctgatctgggtgagcaaggctttgcttctccggtaccaccctctgtccatagtcctgact
gacaagctcttctctctgctcgatgatgctgatctggggccgatggcagccgatggcttc
tcaatgctgatgagcgactctgctgacgttctgaaccgcggttgccatgccgacgttcgc
atcatgtaccgccagcgcttcttcagcgagaattcagcaaagttggtccagggctttaat
gctgcgccgcaagagaagaagcccaactacctgaaggctctgtccaacatagtcaataaa
ctgccaaagcaggttcaagtcactgaactaccagcgctcctgtcgttgctactggaggcc
ctgtcgtgccccgatcagggcgttcagctgtccactctgtcctgtctggagcccgttctc
atcgacccgccaccagctctcatacagcagctggaggctttggtcagcaggttgctggct
ctcatctgtagtccaaccatgaccgtcaggatcgcctcactgcattgcatccacgccctt
tcccgcttccctgaacatgagatcttgccgtttcgggcccgggtgctgcgagctctggcc
cggcccctggacgacaagaagaggctggtgaggagcgaggcggttcaggcacgagcagag
tggttcctcttggggagtcctgggggaaggtga
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