Seriola dumerili (greater amberjack): 111219987
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Entry
111219987 CDS
T05606
Name
(RefSeq) uncharacterized protein LOC111219987 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111219987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111219987
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
111219987
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
111219987
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
111219987
NCBI-ProteinID:
XP_022598605
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MGPRKRGARKRKTEEALAEEKEREDTEEKEADERGDRRRKDRGKNKKYIGAHVGIQGGIW
KAVGSCTEMGGSSFALFLGSQRSWKRPALDLTAAAKFREQLSLQGFDPAHVLPHGSYLMN
CGSPKEEVFEKSQALLVDELSRCSVLGLNLYNFHPGSSLGSITTEQCVEKIAGAINHAHQ
QTPAVVTVLENMSGQGSTVGGQFSELKSIIDKVRDQTRVGVCLDTCHAFAAGYNLAAEGG
VKAMLNEFDEEVGLHYLKAIHLNDSKGKLGCNLDRHEDVGKGHIGISAFRDIVNEPRLDN
IPLILETPGRPGFEYAEQIELLYSLCETE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggggccgagaaagagaggagcaaggaagaggaaaactgaagaagctttggcagaagag
aaggaaagagaggacacagaggagaaggaggctgatgagagaggagacaggaggaggaag
gaccgtggaaaaaataagaaatacattggagctcatgttggcattcaaggtggaatatgg
aaagcagtggggtcctgcacagagatgggtggcagtagtttcgccctgtttctgggctcc
cagcgatcatggaagaggcccgcactggacctcacagctgctgccaagtttcgggagcaa
ctgtccctgcaggggtttgacccggctcacgtcctgcctcatgggtcctacctgatgaac
tgtgggtctcctaaagaagaggtgtttgagaagagccaggccctgctggtggatgagctc
agccgctgcagcgtccttggcctcaacctgtacaacttccaccccggctcctcgctgggc
tccatcaccactgagcagtgtgtggagaagatagcgggcgccattaaccacgctcaccag
caaacacctgctgtggttacagtgttggagaacatgagcggacagggcagcacggtgggt
ggtcagttctctgagctgaagagcatcatagacaaagtgagagaccagaccagagttgga
gtgtgtctggatacctgccatgcattcgcagcaggatataacctggctgcagagggagga
gtgaaggccatgctcaatgagtttgacgaggaagtggggctccactatctcaaagccatt
catctcaatgactccaaaggtaaactgggctgcaacctcgatcgccacgaggacgtcggt
aaaggtcacattggaatctctgctttcagagacattgttaacgagcccaggctagacaac
atccctctgatcctggagacacctgggcggccaggattcgagtatgctgagcagattgaa
ctcctctattccctctgtgagacagaatag
DBGET
integrated database retrieval system
