Seriola dumerili (greater amberjack): 111219991
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Entry
111219991 CDS
T05606
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111219991 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111219991 (vti1a)
Membrane trafficking [BR:
sdu04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
111219991 (vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Sec8_N
Laminin_II
CAP59_mtransfer
DUF1664
Motif
Other DBs
NCBI-GeneID:
111219991
NCBI-ProteinID:
XP_022598623
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MSSDFEAYEQDFGTITAEVTNKIGRIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNSRLKSYKQEMEKLEKDFKRSRIAYSDEVRNELLGDDASSSENQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILANLHTDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRILVFILGAIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagactttgaagcctacgagcaggactttggaaccatcacagcagaagtaact
aacaaaattggcagaattcccaaactaagtggagaggagaagacacagctggttctaaat
gttgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaggtgcgg
gagattcccatccagagtcgagccatgtacaacagcagactgaagagctacaagcaggaa
atggagaagcttgagaaagactttaaaaggtcacgtattgcctacagtgatgaggtgcgc
aacgagctcctgggggatgatgccagctcctctgagaaccagttgataaagttacgtgaa
gagagagcgcatctgttggacaacacagagaagctggaaaggtcatcacggagactggag
gccggctaccagatagcagtagaaaccgagcaagtgggtcaggagattcttgccaacctg
cacactgaccgtgagaagatccagagagccagagaaagactgagagaaacagacgccaac
ctgggcaagagttctcgcatccttaccggcatgctgagaaggatcatccagaatcgaatc
ctggtcttcatccttggagccatcattcttctcaccatcatcctggccatctatttcaat
ctgcgaggccactga
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