Seriola dumerili (greater amberjack): 111220140
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Entry
111220140 CDS
T05606
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04137
Mitophagy - animal
sdu04144
Endocytosis
sdu04145
Phagosome
sdu04148
Efferocytosis
sdu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111220140
04145 Phagosome
111220140
04137 Mitophagy - animal
111220140
04148 Efferocytosis
111220140
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111220140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111220140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdu04147
]
111220140
04031 GTP-binding proteins [BR:
sdu04031
]
111220140
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
111220140
Endosome - Lysosome transport
111220140
Exosome [BR:
sdu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111220140
Exosomal proteins of other body fluids (saliva and urine)
111220140
Exosomal proteins of colorectal cancer cells
111220140
Exosomal proteins of bladder cancer cells
111220140
GTP-binding proteins [BR:
sdu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
111220140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_16
Motif
Other DBs
NCBI-GeneID:
111220140
NCBI-ProteinID:
XP_022598848
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MAGRGGGATRPNGATAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFGRAKNWVKEL
QRQASPNIVIALAGNKADIANKRAVELQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEAQGGAGQGGRTRTGVDLQETAPQGRSGQCCGGGN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcgcggtggaggagcaaccaggcccaatggtgccacagcagcaaacaaaatc
tgccagttcaaactggtgctgctgggggagtcggcagtgggcaagtccagcttagtgctg
cgctttgtcaaaggccagttccacgaattccaggagagtaccattggagctgccttcctc
actcagactgtttgtctggacgacaccactgtgaagtttgagatctgggacacagcgggt
caggagcgctaccacagcctggctcctatgtactacagaggagctcaggcggccatcgtg
gtctacgacattaccaacacagatactttcggacgggcgaaaaactgggtgaaggagctg
cagagacaagccagtcctaacatagtgattgctctggcaggcaacaaggcggacatcgca
aacaagagagctgtagagcttcaggaggcacaaacgtatgctgatgacaacagtctactc
ttcatggagacctcagccaagactgccatgaatgtgaatgaaattttcatggctattgca
aagaagctaccgaagaacgaggctcagggtggagctggacaaggtggacggacccggaca
ggagtggatctacaagaaactgcccctcagggccgcagcggccagtgctgcggcggtggc
aattag
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integrated database retrieval system