Seriola dumerili (greater amberjack): 111220200
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Entry
111220200 CDS
T05606
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111220200
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111220200
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111220200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
111220200
NCBI-ProteinID:
XP_022598927
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MSGENNPAEPDVNLESEDCPGEDVPGFGDDLELNQFDGLPFSSRYYKLLKERKTLPVWEV
RQEFEDALVNNQLVIVCGTAKTGRSTQIPQWCAEFCLSAQYQHGMVVCTQTNRQQAVDLA
LRVADEMDVNIGHEVGYTIPLETCCSSDTVLRYCTDDMLLREMMSDPFLEHYGAIIIDQA
HERTVSTDILLGLLKDILLQRPDLRVVVLAVPPMTDKLLSHYGSVPLISLEASCPAEVVH
SSSGNKDYFYSALRLVLEIHRTKEDGDAVVFFASAEEVHCAQSILQREGTRLGADLGEMV
PVVLHPSQGGLLPFLTKQPGPNRSRRVFLSTQQGEDIWWATESVNFVIDTGVQKKLVYNP
RIRANSEILRPISQCQADVRKQLSGPTGKCFCLYPEESQLPAENSPLILESNITPTVLFL
KRIEIAGLGQCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEIPLEPQMAKA
LLASCEFDCVTEMLTIAAMLSAPSCFLKPPASMTHEAVQCHRKFQHPEGDHFTLINIYNA
FKQSQREQYFSVEKWCQDYFLDHSALKTAEAIRSELTDTLNRIELPISDPSFGTKTNTLN
VKRALLAGFFMQIARDVDGSGNYFILTHKHMAQVHPLSSYGAQSQKLGLPEWVVFHEYTL
SENNCMRTVSEISPQVFIQMAPLYFFYNLPPSESKDILQDMLDPDGSRKCKDEKQKTAAA
GGDASGGCAVMPQTYDRCVIQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggaaaataatccagcggagccagacgttaaccttgaaagtgaagactgtccc
ggggaagatgtacccggctttggagatgatctggagttaaatcagttcgatggattgccc
ttttcctcgcgttactacaaattactaaaagagaggaagactctgcctgtgtgggaggtc
aggcaagagtttgaggatgctctggtaaacaaccagctggttattgtgtgcgggaccgca
aagactgggaggagtacacagatccctcagtggtgcgcggagttctgcctgtcggcccag
taccagcacggcatggtggtgtgcacgcagaccaacaggcagcaggctgtagatctggcc
ttgcgtgtggctgatgaaatggacgtcaacataggccatgaagtgggttacaccatccct
ctggagacctgctgctcctccgacactgttctgagatattgcactgatgatatgctgctg
agagagatgatgtcagacccttttctggagcactatggggccattattatcgaccaggcc
catgagagaacagttagcacagacatactactaggtctcctcaaggacatcctgctgcag
aggcctgacctcagggtggtggtcctcgccgtcccgcccatgaccgacaagctgctgagc
cactacggcagcgtccctctcatcagtctggaggcctcgtgtcctgctgaagtcgtccac
agcagcagcggcaacaaagactacttctactcggcactgagactggtgctggagatccat
cgaaccaaagaggacggagatgctgttgtgttttttgcctcagctgaggaggtccactgc
gcccaaagcatcctccagagagagggcaccaggctgggagcggacttgggcgagatggtg
cctgtagtcctgcacccgagccagggagggttactgcctttcctgaccaagcaaccgggc
cccaataggtccaggagagttttcctctctacccaacagggggaggatatatggtgggct
acagagtccgtcaactttgtcattgacacgggagtccagaaaaaactggtgtacaatcca
agaataagagccaactcggagatactccgacccataagtcaatgtcaggcagatgtacgt
aagcagctgtctgggccaacaggcaaatgtttctgcttgtatccagaggagagccagctt
cctgcagagaactccccgctgatcttggagtccaacattacaccaacagtcctcttcctg
aaaaggatagagatagctggcctggggcagtgcgacttcatcgacagaccagatcctgag
ggtctcatgcaggcgttagaggagctggactacctcgccgctttggatgacgatggaaac
ttgtctgagattggcatcataatgtctgaaatccccctggagcctcagatggccaaagcc
cttctagcgtcctgcgagtttgactgtgtgactgagatgctgacaatcgcagcgatgctg
tcagcgccaagctgcttcctgaagccgcctgcctccatgacccacgaggccgtccagtgt
cacagaaagttccagcaccctgaaggcgaccacttcaccctcataaatatctacaacgcc
ttcaaacaaagccagagagagcaatacttcagtgttgaaaagtggtgccaggactatttc
ctggatcactctgccctgaagacagctgaggccattagatcagagttgaccgacactttg
aacaggatcgagcttcccatctccgacccctcctttggaaccaagacgaacaccctcaac
gtcaaaagagctctactggccgggttcttcatgcagatcgctcgagacgtggacggatca
gggaactacttcattctgacacacaagcacatggcgcaggtgcacccgctctccagctac
ggggctcagtcgcagaagcttggactgccagagtgggttgttttccacgagtacaccctg
tcagagaacaactgcatgaggacagtgtcagaaatttcccctcaagtgttcattcaaatg
gcaccactgtatttcttctacaatctgccccctagtgaaagcaaagacatactgcaagac
atgttggacccggatggatccagaaaatgtaaagatgagaaacaaaaaactgcagctgcc
ggcggcgacgccagcggcggctgtgcagtgatgccgcagacttatgacagatgtgtgatt
caatga
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