Seriola dumerili (greater amberjack): 111220217
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Entry
111220217 CDS
T05606
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111220217 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111220217 (gspt1)
03012 Translation factors [BR:
sdu03012
]
111220217 (gspt1)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111220217 (gspt1)
Translation factors [BR:
sdu03012
]
Eukaryotic type
Release factors
111220217 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
111220217
NCBI-ProteinID:
XP_022598950
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAGLPTAFAALNVNAKPFVPNVNAPVFVPSFLQTSAAE
MPASDGAPDPVASMEVAETAAPVENGGTEADMTTEEETWEQKEEPGGGGGGGGQEEVGGG
GACEEGAARKEDEEMMEEEEEEMPVPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQI
MYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF
TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH
LIVLINKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPVP
ECPWYTGLPFISHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVM
MPNRHTVEVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTFD
AQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCI
ARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagatacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgccgcggcggggctccctaccgccttcgccgccctcaacgtcaacgccaagccgttt
gtccccaacgtcaacgccccggtgtttgtaccgagcttccttcaaaccagcgctgcggaa
atgccggcttcagacggtgcccctgatccagttgccagcatggaggtagcagaaacagcc
gctccggtggagaacggaggcacggaggcagacatgaccacagaggaagagacgtgggag
cagaaggaggagcccggaggaggcggaggaggtggaggacaggaggaagtcgggggagga
ggagcatgtgaagaaggggccgcgaggaaggaggatgaggagatgatggaggaggaagag
gaggagatgcctgtacccaaagttgctccggcaccgccagacgcccccaagaaagaacac
gtgaacgtggtcttcatcggtcacgtggatgccggaaaatcaactatcggaggacagatc
atgtacttaactggaatggtggacaagcgaaccctggaaaaatatgaaagagaagcgaaa
gaaaagaacagggagacatggtacctgtcgtgggctctggacacgaaccaggaggagaga
gacaaggggaagacagtggaggttggcagagcttactttgagactgagaagaaacatttc
accatccttgatgcccccggacacaagagctttgtccccaacatgattggtggagcgtca
caagctgacctggcagtcctggtgatttctgccagaaagggggagttcgagaccggtttt
gagaagggtggacagacacgggaacacgccatgctggctaaaacagcaggagtcaagcat
ctcattgtcctgattaacaagatggatgaccccactgtcaactggagcctagaaaggtat
gaggagtgcaaggagaagctggtgccatttctgaagaaggtgggcttcaaccccaagaag
gacatccactttatgccttgctctggactcacaggtgccaacctcaaggaccctgtacct
gaatgcccctggtacacgggtttgccatttatttcccacctggacagtttgccaaacttc
accagatccagcgacggaccagtcagactacctatcgtagacaagtacaaggatatgggc
acggttattctcgggaagctggagtctggatccattagtaaagcccagcagctggtcatg
atgccaaacaggcacacagtggaggtactgagcttgctgagcgatgatgtggaaacagac
gatgcaggtccaggggagaatctgaagttgaggctgaaggggatcgaggaggaagaaatc
ctgcctggttttatcctctgtagccctgacaacctctgccactctggtcgcacctttgac
gcacagatcgtcatcattgagcacaaatcaatcatttgtcccggttacaatgcagtcctt
cacatccacacctgcattgaagaggtgcaaatcacagccttaatctgcctggtggacaag
aaaactggggagaaaagcaaaacacgaccacgctttgttaagcaggaccaggtgtgtatc
gccaggctccgggcagcaggagtcatctgcttagagaccttcaaagacttccctcagatg
ggacgattcacgctgcgagacgaaggcaaaactatcgccattggcaaagtgctgaagctg
gtgccagaaaaggactaa
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