Seriola dumerili (greater amberjack): 111220220
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Entry
111220220 CDS
T05606
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111220220
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111220220
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111220220
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111220220
Ubiquitin system [BR:
sdu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111220220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
111220220
NCBI-ProteinID:
XP_022598954
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAVGPTMPSDSPRLKAPGGCLGP
TPGAAVYNSTPSPVDRPKEQVISGGDGIDLPQKVLFPPERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTSPFTNYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VINELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGESQVYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSNDVKKTG
DYGHMSHNPGIPGQSSPRPVVIPRINTTVHHNNIGFIGPQLPPHMTKSALHVNGNGSLRD
YPTSSKPSTSSSVVGKPSHGLASSSSISHSISRPTMIPDHDKRQKLSFFIGQGKQNRPSS
SSSSSSSSSSSSSYSQPSSASSSSSSSSSLSSSQSTSDIHSDVRFVPRQLNHVNGTSCSN
GDHHTGGNGASFLVPYGQESSEESDQENCGALDNGCLAKSHLNGNNTTGDVFDNSPQATN
GESGVHHNGNGLNGSTYGVSKSGQNGHHYGQHKINGHKTSEKISGSNLGSVSSVAPIATN
GVDGDHGEPSKEVYNSASSHQASSSQSVHPAASESQHLSTPHTRAKTVSEPLLQHTASSA
VSTPPSSTATKTHSVGSSESASASAHHGNPAALSTPPDCSQSTSGAPAAPQKVSVSGAEA
KDLPQTNGPSAGNEGRTDAKEQHQYKPSSKGNERQPSRDRERDRLHSDWSRDRERHYRDR
SQERESDSDRHRYRRDYRDHRHHHRSYRDRLPPHDRYYRDWDSERRYERTVHHPRERDRD
RCSHHYHYYHHHRSREAWDSERRGHGYSYREDSHSRWRWQQESRESRVTKDKSNGRERNC
YPSKEETSLPDTMPETSSKSKDSPPRAPLSTSRSAPNREDQNHKRTVDNPGKERDDSSEA
CHSKKHKKSKKKKKSKDKDRHRESGSSDMDSDRAAEMKKKKKKSRRQRDSDAEQHSPGAT
QSHKNRSSEERESRKRRHHDSKDAKHDNGFSPEKRRRTDYTDGSSDHLPPSHHTSPTNGS
SHRHLNGYTGNGYSRTNGDSHGFSSGLKH
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaaatctgaccacgagtcagtcgggtgtaagcga
tcccccttcaccagtggagacgtggggatggacggcagctgttccagcagctgggcagtg
ggccccacaatgcccagtgactctccgaggctgaaggctccaggaggctgcctgggcccc
acgcctggagctgccgtctacaacagtaccccctcccctgtggaccgacccaaggagcaa
gtgataagcggtggtgacggcatcgacttgccccagaaggtcctcttccctccagagcgg
ctcaacctgaagtggacccaggttcaccgcattggtgcaggtctgcagaacatggggaac
acctgcttcctcaactcagccctgcagtgtctcacctacacctctccgttcaccaactac
atgctgacacgggagcactctaaaacatgtcatgagccggggttctgtatgatgtgtacc
atgcaaaaccacatcattcaggtttttgccaactctgggaatgtcattaagcccattggt
gtgatcaatgagctcaaaaggatagcaaagcacttccgctatggaagccaagaggatgcc
catgagttcctgcggtacacagttgatgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcaaacacaggcaaccactttcatccatcaagtatttggcgggtacctaagg
tccagagttaaatgtttaaactgcaaagcagtctcagatacatttgacccttttctggat
attactcttgaaattaagacggctcccagtgtctccaaagctctggagcagtttgttaaa
ccagagcagctggatggagaaaacgcctacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcaaagagatttaccatccaccgcagctctaacgtgctcaccctctcactcaaacgg
tttgcaaacttcagtggaggcaaaattactaaggatgtgaaatatccagagtacctggac
ctgcggcctttcatgtctcagtcccagggagagtcccaggtctacgggctgtatgctgta
ctggtccactctggattcagctgtcatgctggacactatttctgctatattaaggcgagc
aacggtcagtggtatcaaatgaacgactcctctgtgtctgtcagtgacatcaggtctgtt
ctcaaccagcaggcatatgtccttttctacatcaaatccaatgatgtgaaaaaaacaggg
gactacggtcacatgagccataacccgggaatccctggtcagtcgtctccgcgacctgtg
gtgataccacgcatcaacaccaccgtccaccacaacaacattggcttcataggtccccag
ctgcccccacacatgactaagagcgctctccacgtcaatgggaatggatctctgagggac
tatcccacaagctccaagcctagcaccagcagcagtgttgtgggaaaacctagccatgga
ctggcctcttcctcctccatctcccactcgatcagccggcccacaatgatcccagatcac
gacaaacgccagaagctttcattctttattggacaaggcaaacagaaccgcccatcctcc
tcctcctcctcctcctcctcctcctcctcatcatcctcttacagccagccgtcctctgcc
agcagcagcagctcctcctccagctctttatcctcctcacaatctacctcagatatccac
tcagacgttcgctttgttcctcgtcagcttaaccatgttaacggcacgtcttgcagtaac
ggggatcaccatactggaggtaatggagcgtcgttcctggtgccgtacggccaagagtcg
tcagaggaatcagaccaggagaactgtggcgctctggataacggctgtttagccaagtcg
catcttaatggaaataacacaacaggagatgtctttgataattctcctcaagccacaaat
ggagagtcaggagtgcaccataatggtaacggattaaatggatcaacctatggcgtctct
aaatcaggccaaaacgggcaccattatggacaacacaaaatcaatggacacaaaacctct
gagaagatctctggcagtaatcttggaagtgtttcctctgtggctcccattgctactaat
ggagtagatggtgaccatggtgaaccaagcaaagaggtttataattcagcctcatcccac
caggccagttcttctcagagcgtccatccggctgccagtgaaagccagcacctctccact
cctcacacaagggctaaaactgtgtctgaacccctgcttcagcatacagcatcttccgct
gtcagcacgccaccttcatctactgctacaaagacccattctgtcggatctagtgaatct
gcttccgcttctgcacatcatggcaaccctgcggccttatccaccccgccagactgctcc
caaagcaccagtggggcacctgctgctccacagaaggttagcgtaagtggggctgaagcc
aaggatctaccacagaccaatggaccgtcagcagggaatgaaggacgtacagatgctaag
gagcagcatcagtacaagcccagttctaaagggaatgaaagacaaccttcccgagacagg
gagagagacagactgcactctgactggagcagagacagagaaagacactacagggacagg
agtcaggagcgagaaagtgacagtgatcgtcatcgatacaggcgggactaccgagatcac
cgccaccatcatcgctcgtacagggatcgtttgcctccccatgatcgatactacagggac
tgggattctgagcgtcgctatgagcggactgtccaccaccccagggagcgcgatcgcgac
aggtgctctcaccattaccactactaccaccaccacagatccagagaggcctgggactct
gagcggaggggacacggctattcataccgcgaggactctcacagtcgctggaggtggcag
caggagagtcgagaatcccgggtgacaaaggacaagagcaacggcagggagaggaactgt
tacccttcaaaagaggagacttccttgccggacacaatgccagaaacatcctcaaagtcc
aaggactcgccccctcgggctcctctctccacgtctagatcagctccaaacagggaggat
caaaatcacaaaaggactgttgataatccgggcaaggagagagacgacagctctgaggcc
tgtcactctaaaaaacacaaaaagagcaagaaaaagaagaagtcaaaggataaagacaga
caccgtgagagcggtagttctgacatggattcagacagagccgctgaaatgaaaaagaaa
aagaagaaaagcaggaggcagcgggacagtgatgcggagcagcacagtccaggagccact
cagagccacaagaacagaagcagcgaggagagggaaagccgcaagcgacgtcaccatgac
agcaaggacgctaaacatgacaacggtttttcaccggaaaaacgccggcgcacagactac
actgatggcagcagtgaccatctacccccctctcatcacacctcacccactaacggttca
tctcaccgccatctcaatggatacacaggaaacggttacagccgaaccaatggcgactcc
cacggattctccagtggcctgaaacattga
DBGET
integrated database retrieval system
