Seriola dumerili (greater amberjack): 111220332
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Entry
111220332 CDS
T05606
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04514
Cell adhesion molecule (CAM) interaction
sdu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111220332
04517 IgSF CAM signaling
111220332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111220332
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
NGL family
111220332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
DUF7617
Motif
Other DBs
NCBI-GeneID:
111220332
NCBI-ProteinID:
XP_022599112
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MRVVMVTSPCTPSPLLWLVQLLLWFHNHGPQLTEAAPPCPTPCTCSNQASRVICTRKSLD
QVPESISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGEEENSARQYVNETFIDFSNP
TVQRGVIEGRPGITISPSLSSLSSLSPRANRATENAVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGAGGEGTLRIHHPEIVNLPNIGRTDTLNHYYKTHFNNNVMGLSIGTEGMGPGGILKNQ
QGQDIPISCTSVPISTSNLLTSSGNGTNTNPNSMSPPLPMSLPMPTMGLHGSIKGFMGQN
QNPQMEPLLFKGSSKENVQETQI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgcaccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggacctcagctcacagaggcagcacccccctgcccc
accccctgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaagagtttagat
caagtcccggagagtatttcagagaacacaagatacctcaatctacaagagaacacaatt
caggtgatcaagtctgacacatttaagcacctgcggcatttggaaatcctccagctctcc
aagaaccacatccgacaaattgaggtgggagctttcaatggccttcccaacctcaacacg
ctggagctttttgacaaccgtcttacagtggtaccgtcacaagcctttgagtacctcagc
aagctaagggaactatggctacgaaacaaccccatcgagacgctgcctgcatttgccttt
caccgagttccctctttacgacgtctcgatctaggggaactcaggaagctggatttcatc
tcagaggctgcttttgaaggtctggtaaacttgcgcttcttgaatcttggcatgtgcggc
ttgaaggacatccctaacctcaccccactggtacgactagaggagttagagctttcaggg
aaccagcttggtatagtccggcctggatccttccagggcctagtgtcgcttcgcaagctg
tggctaatgcactccagagtttcagtcattgaacgcaatgcttttgatgatctcaaaaac
ctggaggagctcaacctctcccacaattccctgcattccctgccccatgatctcttcacc
cctttgcaccagttggagagagtgcatctcaaccacaacccttgggtgtgcaactgtgat
gttctgtggctcagctggtggctgaaagaaacagttcccagcaacaccacatgttgtgct
cgctgccatgcgcccccaggtctaaagggcaagtacattggggaactagaccagagccac
tttacctgctatgccccagtgattgttgagccacccactgacctcaatgtcactgagggc
atggctgctgagctgaaatgtcgcactggaacctcgatgacctctgtgaattggttcact
ccaaatggcactctgatgacccatggatcgtaccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaatgtgaccgtgcaagatactgggcagtacacttgcatggta
accaactctgctggaaacaccactgcaaccgctgtcctcaatgtgtctgcgtcagacccc
agcaacagctacagttatttcaccactgtcactgtggaaacagtagagacagtaagagga
gaggaggagaactcagcaagacagtatgttaatgagacattcatagatttctctaatcct
actgttcaaagaggggtgatagagggcagacctggcatcactatatcaccttctctctcc
tctctttcctcactgtccccacgagccaacagagctactgaaaatgcagtgactgtgtcc
ataatggatgtaactaacattcctggcctggatgatgtaatgaaaacaactaagatcatc
attggttgctttgtggccattacgtttatggcagctgtaatgttggtggtcttctataaa
ctccggaagcagcaccagctacacaagcaccacggcccagccagagccattgaaatagtc
aatgtagaagatgagatcggagccggggccgggagtggtatctcaggtggttcaacaatg
aattctggagcaggtggagaaggaaccctaaggatacatcatccagaaatagtcaacctt
cccaacattggccgtacagatactcttaaccattactacaagacccatttcaacaacaat
gtgatgggtcttagtattggcaccgaagggatgggaccaggagggatcctcaagaaccag
caaggccaggatatccccatctcctgtacctcagtcccaatctctacatctaatttgctc
acctcatcaggcaacggcaccaataccaaccccaattctatgtccccaccgctgccaatg
tctctccccatgccaactatgggcttacatggatcgatcaaaggtttcatgggccaaaac
cagaatccccaaatggagcctcttctcttcaaagggagctcgaaggaaaacgttcaagag
actcaaatctaa
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