Seriola dumerili (greater amberjack): 111220386
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Entry
111220386 CDS
T05606
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111220386 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111220386 (vps35)
Membrane trafficking [BR:
sdu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111220386 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
111220386
NCBI-ProteinID:
XP_022599182
UniProt:
A0A3B4UAT1
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQSEGSEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQIVLAGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIVAQEQVDAILNLVATLIQDQPDQPVDD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSLDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacacagcagtctccccaggatgaacaggagaagcttctcgatgaagctgta
caggctgtcaaggtccagtctttccagatgaagagatgtctggacaagaacaagctgatg
gatgccctgaagcatgcctctaacatgctgggtgagctgaggacctccatgctctctcca
aagagctactatgagctctacatggccatctctgacgaactccactacctggaggtctat
ctgactgatgagtttgctaagggacgcaaggtggcagatctctatgagctggtccagtat
gcagggaacatcatccccagactctatctgttaatcacagtgggtgtggtgtacgttcgc
tccttcccccagtctcgtaaggacattctcaaggacctggtggagatgtgtcgtggtgtc
cagcacccactcagaggcctcttcctcagaaactacctgttgcagtgcacccgcaacatc
ctgcccgatgatggagagcagtcagagggatcagaggagatgaccggtgatatcaatgac
tccatcgactttgtcctgctgaactttgcggaaatgaacaagttatgggttcgaatgcag
catcagggtcacagccgagacagagagaagagagagaaggaacgacaagaactcaggatt
ttggtcggcaccaaccttgttcgcctcagccaactggagggtgtcaatgtggacaagtac
aaacagattgttcttgctggagtgctggagcaggttgtgaactgcagagactcgttggct
caagagtatctcatggagtgcataattcaggtttttccagatgagttccaccttcagacg
ctgaaccctttcctgcgttcctgtgctgagctccatcaacacgtcaacgtcaagaacatc
atcattgccctcattgacagacttgctctgtttgctcatcgagaagatggccctggcatt
ccagctgagatcaaactgttcgacattttctctcaacaagtggccactgtcattcagtct
cgccaggacatgccatcagaggacgtggtctctctccaggtgtccctcatcaatttggcc
atgaaatgctaccctgaccgtgttgactatgtagataaggtcctggagagcactgtggag
attttcaacaagctcaacttggaacacatagcgaccagcagcgcggtgtcaaaggaactc
acccgactgttgaagatccctgtggatacctacaacaacatcctgacagtcctgcagctc
aagcacttccctccactcttcgagtactttgactatgagtcgcgcaagagcatgagctgc
tacgtgctgagcaacacgctggactacaacaccaccattgtggcacaggaacaggtggac
gccatcttgaatttggtagccacgctgatccaggaccagccagaccagccagttgatgat
cctgaccctgaggactttgctgaggagcagagccttgtgggtcgtttcatccatctcctc
cactctgaagatcctgatcaacagtaccttatcctgaacacagctcgaaaacactttggt
gccggtggaaaccaaaggattcgctacacacttcctcctctggtgttcgctgcctaccag
ctggccttcagatacaaggagaactcctcattggatgacaagtgggaaaagaagtgtcag
aagatcttttccttcgcccaccagaccatcagtgcacttatcaaggccgagcttgctgag
ctgcctcttcgactcttcctgcagggggcactggctgcaggcgagattggctttgagaac
cacgagactgtagcatacgagttcatgtcacaggccttttctctgtatgaggacgagata
agtgattccaaagcccagctggcagccatcacgctgatcattggaacctttgagcgaatg
cgttgtttcagtgaagaaaaccatgagccgctgaggacccagtgtgcgctggctgcctcc
aagctgctgaagaagcccgaccagtgccgagccgtcagtatctgtgcccacctcttttgg
tccggtcgcagcactgacaagaatggtgaagagatccgcgatggtaagcgggtgatggag
tgtctaaagaaagccttgaagattgccaaccagtgcatggacccatcactgcaagtccag
cttttcattgaaatcctcaacagatacgtctgcttctatgagagggaaaacgatgcggtg
actgtccaggtattaaaccagctgatccaaaagatcagggaagaccttcccaacctggag
gcgagtgaggagacggagcagatcaacaaacacttccacaatacactggagcatctccgc
ctgcagagagaatcccctgagtctgagggccccgcctatgagggcctggtactttaa
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