Seriola dumerili (greater amberjack): 111220406
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Entry
111220406 CDS
T05606
Symbol
syde1
Name
(RefSeq) rho GTPase-activating protein SYDE1 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111220406 (syde1)
Membrane trafficking [BR:
sdu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
111220406 (syde1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
CCDC39
Motif
Other DBs
NCBI-GeneID:
111220406
NCBI-ProteinID:
XP_022599201
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MAEPLLKRTFSRLRGKDRSRRKTDPKLSDVPVKSDSVLQTSSSPSSLSMTTLRTPADPDP
PTPPRNHITVAKKQQWARQGSAAPPTSLSLSWDCPSGISQDAPGQAWSQRLAQDKIEQSS
DRTRTPCGPVSSTSVMQEASQPAGGSTDLPAKLSGQRTYLQSLDRSSRAWVLSSGKSQAS
EEVCGPQEDSGSNIWYNPIPEEEDAGGPCREEEVWRRRHEREEVGATKRVGPGELGGVWV
GSAEVHSSDCQLEGANPSVSHYIDDITTENTDPPPIDSSPPSQKKGGVSGSVIDRLRSPG
TVRKLSLKMKKLPELRRKLSLRSSSRVHRQGNDSRGGDELTNKNVTSSSVSNQNVISRYH
LDSSAPPARPLRRSSRGRSASKGGYLSDGDSPELLPRQQGPQPMVSQEMACDVSSFRLYV
DSDPPRCSQRVTGLLTIHLLGLEEMKTSRYSPRTPGASGNYRSEGSKDIFLAIQIDGVTR
ARTALLNLRGSALSLNHTFHLELERARQLRMVVLTPANPQAVGGSKPGTDQSQTSGGPTR
NRVCCLGGVSIPPLFKGSRSQQLCVKLEPRGLLYVKLSLQEKWDTQPSTDSSAPANVFGV
ELHNLVEKEGSAAPVPLLIQKTVAEIERRGLKVVGLYRLCGSAAVKKELRDWFERNSSAV
CLSEDLYPDINVITGILKDYLRELPSPLITRTLYQVVREAMTLRPPPGPPATPDPQLAQC
TVELLSCLPPPERATLSLLLDHLSLVASFSSSNRMNHQNLAVCFGPVLLTPTQEAWRGGG
RGGGRGGRGGGKGLGHGEEIASAVDFKRHIEALHYLLQQWPVPTHRIPADDHTHTSPPPS
PALTHNPLGLQQQRRPALRLALPQNPEEEVVVSRRGRGGLARLESPPPINRYAGDWSVCG
RDLLSGQEADYDEVAGSESDAGSGDEDEEEKKKVWSSGGGGGGGLYVDDFMDFDAPFNCR
LSLKDFDTLIHDLDRELAKQINICL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcccctgctgaagaggaccttctccaggctgagaggcaaagacagatcccgc
aggaagactgacccaaaactgagtgatgttccagtcaagtccgactctgttctccagact
tcttcatcaccatcatcactatcaatgacaacattgagaactcccgccgatcctgatccc
cccacacccccacgtaaccacatcactgttgctaagaaacagcagtgggcgagacagggc
tctgcagctccgcccacgtccctgtccttgagctgggactgcccatcagggatatcccaa
gatgcacctgggcaggcctggagccagaggctagctcaggacaagattgagcagagcagt
gacaggacgagaaccccctgtggtcctgtcagttctacgtcagtaatgcaggaagcctcc
cagccagcagggggctccactgacctccctgctaaactgtccggccagcgcacctacctg
cagagcctggatcgcagcagccgagcctgggtgctgtcttcaggaaagtcccaggcctca
gaggaggtctgcggtccacaggaggacagtggcagcaacatctggtacaacccaatccct
gaggaggaggacgcaggaggtccatgcagggaggaggaggtctggaggaggagacacgag
agggaggaggtaggagcaacaaagagggtggggccaggagagctcggaggggtgtgggtt
gggtcagcagaggttcatagcagtgactgtcaactggagggcgccaatccaagtgtcagc
cactatattgatgacatcactacagaaaacacagaccccccacccatagattctagcccc
ccctcccaaaagaaagggggcgtgtctggcagtgtgattgacaggctgaggtctcctggt
acagtgaggaaactctccctaaagatgaagaaacttcctgagctgcgacgtaaactcagc
cttcgctcatcctcccgcgttcatcgccagggaaatgacagcaggggcggggatgagttg
accaataagaatgtaacatcttcatcggtgtccaaccagaatgtgatcagcaggtatcac
ctggatagctccgcccctcctgcacggcccctgcggcgatcatccagaggacgctctgcc
agtaaagggggttaccttagtgatggggactcccccgagctgctgccacggcaacaaggc
cctcaacctatggtttcccaggaaatggcatgcgatgtcagttcgttccggttgtatgtg
gactctgatccacctcggtgcagccagcgggtgacagggttactgaccatccacctgctg
ggcctcgaggagatgaagaccagcaggtatagtccgcgaacacctggagctagtggaaat
tacaggtccgagggcagtaaggacatcttcctggccatccagattgatggggtgacgaga
gcaaggaccgcccttcttaacctgcgaggttccgccctctcattaaaccacaccttccac
ctggagctggagagagcccggcagctccgcatggtggtgctcacaccagccaatccacag
gcagtgggtgggtctaaaccagggacggatcagagtcagacttcaggtggtccaaccagg
aacagagtctgctgtctgggtggagtctccatccctccactctttaaagggagtcgcagt
cagcagctctgtgtgaagctggagcccagaggacttctttatgtcaaactgtctctacaa
gaaaagtgggacacacagcccagcactgacagctcagcacctgctaatgtgtttggggtg
gaactgcacaacctggtggagaaagaaggttctgcagctccagtccctctgctgatccag
aagaccgtggcagagatagagcgacgaggactaaaggtggtgggtctgtacagactgtgt
ggttctgcagcggtgaagaaggagctcagggactggtttgagaggaacagttcagctgtg
tgtctcagcgaggacctctaccccgacattaatgtcattacaggtatactgaaggactac
ctgcgagagctgccatctccgctcatcaccaggactctgtaccaggtggtcagggaggct
atgaccctacgacccccacctggcccacctgcaacccctgaccctcagctggcccaatgc
actgtggagctgttgtcctgtctcccgcctccagagagggccaccctgtctctcttactg
gaccacctcagcctggtggcatccttcagctcgtctaacaggatgaaccaccagaacctc
gctgtctgcttcggccccgtgctcctcaccccgacccaggaggcctggaggggaggagga
cgaggaggagggagaggaggaagaggaggagggaaagggcttggtcatggtgaagagata
gcgagtgctgtggattttaaacgacacatcgaggcgttgcactacctgcttcagcagtgg
ccagttccgacacatcgaatcccagcagacgaccatactcacacctcccctcctccctcc
cctgcccttacccataaccccctgggtcttcagcagcagcggcgtcctgcactgcgattg
gctctgcctcagaatcccgaggaggaggtggtggtgtcacgtcggggtcgaggcggtctg
gcccggcttgagagtccgccaccgatcaaccggtacgccggggactggagcgtctgtgga
cgagaccttctgtcgggacaggaagccgactatgatgaggtggcaggaagtgaaagtgat
gcaggcagcggcgatgaagatgaggaggagaagaagaaggtgtggtcatcaggaggagga
ggaggaggaggtctctatgtggacgacttcatggattttgacgctccgtttaattgccga
ctcagcctaaaggacttcgacactctgatccacgacctggaccgagagctggccaaacag
atcaacatctgtctgtag
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