Seriola dumerili (greater amberjack): 111220521
Help
Entry
111220521 CDS
T05606
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdu03009
]
111220521 (nsun5)
Enzymes [BR:
sdu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
111220521 (nsun5)
Ribosome biogenesis [BR:
sdu03009
]
Eukaryotic type
Other ribosome biogenesis factors
111220521 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
Mucin-like
Med3
Motif
Other DBs
NCBI-GeneID:
111220521
NCBI-ProteinID:
XP_022599320
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MALYVKAAEILEKAERKQGALKTLVYDSKFANIKQLFALVCETQKFSSVLRELIESTKLL
KHTKLKMHLAMVLVYDLVMGQGLKCGGSWKSTMLKHRSRLQAELARIKIKQKVSRNEDLL
PAVVQRSAVDHLPRYVRVNTLKTTVEDAVDYLKRDGFSYQGQASRLEDLTLKEKDFVRDL
HLPEVLVFSPKTDFHDHFLYKAGHVILQDKASCLPAYLLNPPPGSHVIDACAAPGNKTSH
LAAIMKNKGKLFAFDLDAKRLATMSTLLLRAGVTCQQLAHQDFLKVDPDSLQYKDVEYIL
LDPSCSGSGMVCLRDNSSADQEKDQARLTSLASFQLRCLNHGLRFPCLKRLVYSTCSIHS
QENEEVVKACLQQNPGFRLVPLLAKWPERGLEPLTQCLRASTSKTRSHGFFVALLEKHSG
AGNMNQRPPLQISDPEATSHSSLTCEKRPEASETENKQTPAADSTQTDSTPGKKKRRKRK
RKKAATAEG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtacgtgaaagccgcagagatcctggagaaagcagagaggaagcaaggcgca
ttgaaaactctggtttacgacagtaagtttgcgaacatcaagcagctctttgctctggtt
tgtgagacccagaagttttcctccgtcctgcgggagctcatcgagtccaccaagctgctc
aaacacaccaagctgaagatgcacctggccatggtgctggtgtacgacctggtgatgggc
caggggctgaagtgcgggggctcctggaagtccacaatgctgaaacatcgctccaggctg
caggcggagctggcccgcataaagataaagcagaaggtcagcaggaatgaagacctgctg
ccggccgtagtccagcggtccgccgtggaccacctgcccaggtatgtgcgtgtgaacacc
ctgaagaccaccgtggaggatgctgtggattaccttaagagggacggcttctcctaccag
ggacaggcctccaggctggaggacttaaccctaaaggagaaagactttgtgagggacctg
cacttgccggaggtgctggtcttttctcctaaaactgacttccatgaccacttcctgtac
aaggctggccacgtcattctgcaagacaaagccagctgcctccctgcctatctcctcaac
ccccctcctggcagccatgtcattgatgcctgcgctgcccctggcaacaaaaccagccac
ctggcagctataatgaagaacaagggcaagctgtttgcctttgatttggatgccaagcgt
ttggccaccatgtctactctcctgctccgagctggagtgacctgtcagcagctggcccac
caggacttcctgaaagtggaccctgatagcctacagtataaagatgttgagtatatcctg
ctggatccctcatgcagtggatcaggtatggtgtgcctccgggacaacagctctgctgac
caagagaaggatcaggctcgtctgacctctttggcctcctttcagctgcgatgcctgaac
cacggcctcaggtttccctgcctgaagcgtctggtctactccacctgctccatccatagc
caggagaatgaggaagtcgtaaaggcctgcctgcagcagaaccctggcttcaggctggtt
cctctgctggccaagtggcctgaacgaggcctagaaccactcactcagtgtctgcgtgcc
agcacctccaagacccgctcacacggcttcttcgtggctttgctggagaaacacagtggg
gctgggaatatgaatcagagaccacctctccagataagtgaccctgaggcgacatcacac
agttcactcacctgtgagaagagacctgaagcttcagagacagagaacaaacagacacct
gctgcagactccacacagactgacagcacaccagggaagaagaagaggaggaagaggaag
aggaagaaggcagcaacagcggagggatag
DBGET
integrated database retrieval system
