Seriola dumerili (greater amberjack): 111220538
Help
Entry
111220538 CDS
T05606
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111220538 (srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111220538 (srf)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
111220538 (srf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
111220538
NCBI-ProteinID:
XP_022599342
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MLPSQVGSAPSGNGSASGRGTTGHGSGVVGSGIRPVLVRAGQALAGVSDSAGAAGRLGER
DAIGMLGANGPGGPRGTRPGNGTGVTPLQTAVQGNMVGLNTGVVLPHGARFDPDRESAPL
CSGSDNDSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVTGQEVGVPPGGYGMVPGGVAGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SMGDTKDTLKPTFTVASLPGTTSSSQSTVPTTSTTMQVSSGPSFPITNYLAPVSASSNVS
ANGTVLKTAGASTGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQTLAA
AQQPQQGQQAVFRFPAAVSLTGAGVPQQLQAIQVHPNTQSTSNNDSSPEISHTSTNSTAT
VSLPATIVTSSVPTSVAGHMMYPSPHTVMYASTPALADGGLAVLNAFSQGTSAMQVSHAQ
AQDTGAVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDATQNSKS
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggttggatctgcaccatctggaaacggctcagcttcaggcaggggt
accacaggacacggttcgggggttgtcggtagcgggatccgtcccgttttggtcagggca
gggcaagctttagctggggtcagcgacagcgctggtgctgccgggcgactgggggaaaga
gacgccatcgggatgctgggggctaatggtccagggggtccgagaggtacgagaccgggg
aacgggacaggggtgacacctctacagaccgccgtccagggaaacatggtggggttgaac
acgggagttgtgttgcctcacggagcccggttcgacccggacagagagagtgctccgctc
tgcagcggctcggataatgactcggactcgggagatgatgacgaccccgtgggttcactc
ggggacagcaggagaggggtgaagcgggagagaggggagatggaagctgcggtgacgggg
caggaggtgggggtacctcctggaggttacggcatggtgcccggaggggtcgccggggca
aagccgggaaagaagacacgtgggcgcgtaaagataaagatggaatttattgacaacaag
ttgagacgctacacgactttcagcaagaggaagacgggtattatgaaaaaggcctatgaa
ctctccaccctgacgggaacccaggttctgttgcttgtggccagtgaaactggtcacgtt
tacacttttgccacccgcaaactccagccaatgatcaccagtgaaacgggcaaagccctg
atccaaacttgcctcaactcgccggattcaccaccacgctctgacccctccacggaccag
cgcatgagtgccacaggcttcgaggagacggacctcacctaccaggtgtcggagtcagag
agcatgggcgacacaaaggatacactgaagccgacgttcacggtagccagcctaccaggc
actaccagcagctcccagtccacggtacccaccacctccaccaccatgcaggtgagcagc
gggccctcttttcccatcaccaactacctggcgcccgtctcggccagcagcaacgtcagc
gccaacggcaccgtcctcaagactgccggtgcctccacgggggtcatgcagctgcccggt
ggcttcactttcatgcccgcaggcactcctctcccccctggtacccccaccattcctctg
agccagctgcagcagcactctctggccctccaggggcagcatggtcagaccctggccgcc
gcccagcagccacagcagggacagcaggctgtattccgcttccctgctgctgtctccctc
acaggagcgggggttccccagcagcttcaggctatccaggtccaccccaacacccagtcc
acctccaacaacgacagcagccccgagatctcccacacctccacaaactccacggccacg
gtgagtctcccagcaaccatcgtcacctcgtcggtgccaacgtctgtggcgggtcacatg
atgtaccccagcccccacacagtaatgtacgcctccacgccggcgctggctgacgggggg
ctggctgtgctcaacgccttctcccagggcacctcggccatgcaggtgtcccacgcacag
gcccaagacacaggtgctgtccctcaggtgttcctcacagcacctccaggcacggtgcag
atacctgtctcagcggtgcagctacacccaatggtgattggccagcagtcgagcggcagc
agcagtaacctgacggagctccaggtggtcaatttggacgccacacagaactcgaagagc
gactga
DBGET
integrated database retrieval system
