Seriola dumerili (greater amberjack): 111220591
Help
Entry
111220591 CDS
T05606
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111220591 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111220591 (spast)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
111220591 (spast)
Membrane trafficking [BR:
sdu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
111220591 (spast)
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
111220591 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
MIT
TIP49
AAA_16
AAA_14
Mg_chelatase
IstB_IS21
nSTAND3
AAA_24
NPHP3_N
AAA_2
AAA_33
DUF815
DUF5906
Motif
Other DBs
NCBI-GeneID:
111220591
NCBI-ProteinID:
XP_022599434
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MSVKMNASKGKDSGEVIRNYHKQAFEYISKALRIDEDDTGEKEEAVQWYKRGISELEKGI
AVEITPQVGDRERAKRLQDKMVNNLTMAKDRLALLEATLASKRRNNPQPKPVPKSQPAVP
GNIRPSSAVRPRATDPKVTPRMSKVQNGKPAAAKQPPKRDLKNFKNVDSKLANLILNEIV
DSGASVSFGDIAGQDLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAR
AVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVIFIDEVDSLLCERREG
ENDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKRVYVGLPDEQT
RFTLLKNLLGKHGNPLSKNELSSLAKLTAGYSGSDLTSLAKDAALGPIRELGPDQVRYMA
ANEMRNIKMKDFEDSLKRIKPSVNPATLNMYTKWNKDFGDTTAF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaaaatgaacgcaagtaaaggcaaagacagcggcgaagttatcagaaactac
cataagcaggcgtttgaatatatatcgaaagcattaaggatcgacgaagatgatacaggt
gagaaggaggaggctgtgcagtggtacaagagaggtatttctgagcttgaaaagggtatt
gcagtagagatcacgccacaagtaggagatcgagagcgagcaaagagacttcaagacaaa
atggtcaacaatctcactatggcaaaagacaggctcgcccttttagaggcaacacttgca
tctaaaaggaggaataatccacaaccaaaacctgtacctaaaagccagcctgcagtacct
ggtaacatcaggccctcctctgctgtcagacctagagccactgatccaaaggtgacccca
cgaatgtcaaaggttcaaaatggaaaacctgcagcggcgaaacagccaccaaagagggat
ttgaaaaacttcaagaatgtggacagcaaactggccaacttgattctgaatgaaattgtt
gacagtggagcatctgtatcctttggagacattgctggacaggatctggccaagcaagca
ttacaagagattgtgatcctacctgccctaagaccagagctctttactggcctgagagct
ccggcacgtggtttgcttttatttggcccacctggaaatgggaaaaccatgctggccaga
gcagttgccgctgagtcaaatgcaacattcttcaacatcagcgctgccagtttgacctct
aaatatgtgggagaaggtgaaaagcttgtacgagcactttttgcagttgccagagaatta
cagccctctgtcatctttatcgatgaagtggacagcttgctttgtgaaaggagggaggga
gaaaatgatgcctctcgtcgactaaaaactgagttcctcattgagtttgatggggtgcag
tcagggggagatgaaagggtcctcgtaatgggcgcaaccaacaggcctcaggagctcgat
gaagcagtactgaggcgctttgcaaagagagtttatgtgggattgccagatgagcagaca
agattcacactgctgaaaaatcttttgggaaagcatgggaatccactgagcaaaaatgag
ctgtccagtcttgcaaaactgactgcaggatactcaggaagtgatttgacctcattagcc
aaagatgctgcactcgggccgattagagagttgggaccagatcaagtccggtatatggct
gctaatgagatgcgtaacataaagatgaaagactttgaggattccctgaagcgcatcaag
cccagtgttaacccagctactctcaacatgtatactaaatggaacaaagattttggtgac
acaacagctttttga
DBGET
integrated database retrieval system
