Seriola dumerili (greater amberjack): 111220620
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Entry
111220620 CDS
T05606
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111220620 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111220620 (polr1b)
Enzymes [BR:
sdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111220620 (polr1b)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111220620 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
111220620
NCBI-ProteinID:
XP_022599487
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MDYSTKWSNLPKAPSLKNLTQGGFGVLKEAQHAAVQDLTKAHIESFDQAVTDGLSRVVQA
IPPLEFTIKNDKISLSFVEATVYNPVVAKGNICKEMRVFPAECRGRRCSYKGKLVADISW
SINGVPKGIIKQSLGQVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMARPKWKSRGQGYTQYGISMHCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCVSEMLRIVTEEGCTTRSKV
LNYLGERFRVKMNLPEWYTNEQCANFLLDECICVHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKERLAAWLVSVKLSFDKKGSRLSGGWSPENMMKIF
NMGTDVTKPFEYLLATGNLNSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTLPTTSLPALLCSLGVT
PVDGSPGQAYSDCYPVVLDGAVVGWLEAELAPVVVDSLRRFKVLREKKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVHNLALGKEELIGTFEQLYINVGILEDEIEPGVTTHQE
LFPHTMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVRGEDSVVFGTKSGEVNGKLDADGLPHIGSTLQYGDPFYSYINLNTGQTFTTYYKS
QEACVVDNIKICSNDTGSGHFKRICITVRIPRNPTIGDKFASRHGQKGILSRLWPAEDMP
FTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEYFG
EMLRAGGYNYYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCIDCGSLLSPLLEK
PPPYWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFIAELAAMNIKVKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggactattcaacaaagtggagtaatttaccaaaagccccgagtctaaagaatctgaca
cagggagggtttggggtcctgaaagaggctcaacatgcggctgttcaggatttgactaaa
gcccacatcgagtcttttgaccaggccgtcactgacggactcagccgcgttgtacaggcc
atccctccccttgagttcacaataaaaaatgacaagatcagcctttccttcgtggaagcc
acagtctacaacccagtggtcgccaaagggaacatctgcaaggaaatgagggtgtttcct
gcagagtgcaggggcagaagatgctcatataaaggaaagctggtggcagacatcagctgg
tcgatcaatggagttcccaaaggcatcatcaaacagtccctgggccaggtgccaatcatg
gtcaagtccaagctgtgtaacctgcatggtatgtctcctaaggagcttgtcgaacaccat
gaggaagcagaggaaatgggaggttattttattgtgaatggaattgagaaggttatccga
atgctgatcatgccgagaaggaactatcccattgccatggcaagaccgaagtggaagagc
aggggccagggatacactcagtatggtatttctatgcattgtgtaaaggaggagcacaca
gccatcaacatgaacctgcattacctggaaaatgggactgtgatgctgaacttcatctac
cagaaagagctcttcttcctcccactaggctttgctctcaaggccttggtggacttcaca
gacttccagatctaccaggaactgatcaaaggccgcgaggacaattccttctacaagagc
tgtgtatccgagatgctgcgcatcgtcacggaggagggctgcaccacccgcagcaaggtg
ctcaattacctcggcgagcgcttcagggttaaaatgaacctccctgagtggtacaccaac
gagcagtgtgccaacttcctgctggacgagtgcatctgtgtccacctgaagtcagacgtg
gagaagttctacctgctgtgtctgatgacaaggaagcttttcacgtttgccaagcaggag
tgcatggaggagaaccccgacagcatcatgtgtcaggaggtgctcactcccggccagctc
tacctcatgtttctgaaggagagactggctgcctggctggtgtctgtgaagctgtccttt
gacaagaaaggcagcagactgagtggaggatggagtcctgaaaacatgatgaagatattt
aacatgggcactgatgtgaccaaaccctttgaatatctgctggccactgggaacctcaac
tccaagacaggtcttggcatgctgcagaacacaggcctgtgtgtcgtagctgacaagctc
aacttcatccgctacctgtcccacttccgctgtgtgcacagaggagcagcgttcgccaag
atgaggaccacttctgttcgtaagcttctgccagagtcctggggcttcctgtgtcctgtc
cacactccggacggagagccctgtggccttatgaaccacatgacagccagctgtgagatc
gtggcaccgaccttgcccaccacatccctgcctgctctgctctgctctctcggtgttact
ccagtagatggatcccctggtcaagcctattcagactgctaccctgtggtcctggacggg
gccgttgtaggctggttggaggctgaattagccccagttgtggtcgactcactgcgaagg
ttcaaggtgctgagagagaagaagatccctccctggactgagattgttctggttcctaaa
acaggcaaggccagcttgtacccaggcctgttcctcttcactacaccctgtcgtatggtg
cggcctgtacacaatctagctcttggaaaggaagagttaattgggacatttgaacagctt
tacatcaatgtgggcatcttggaggatgagatcgagccaggagtgaccacacaccaggag
cttttccctcacaccatgctgagcgtggtggctaacttcatcccctactcagaccacaac
cagagtcctaggaacatgtaccagtgtcagatgggtaagcaaacaatgggtttccccctg
cactcgtttatggatcgctcagataacaagctgtaccggctccagaccccacagagccca
ctggtcaggccctacatgtacgaccactacaacctggacaactaccccagtggcacaaac
gccatcgtggccgtcatatcctacacgggctacgacatggaagatgcaatgattgtgaac
aagtcatcatgggagagaggctttgcccatggaagtatctacaagactgagctggtggat
ctggcagacaaggtgaggggagaagacagcgtggtgttcgggaccaagtcaggtgaggtg
aatggaaaactggacgctgatggactacctcacattggctcaacacttcagtatggagac
cctttctatagctacatcaacctcaacactggccagaccttcaccacctactacaagagc
caagaggcctgtgtagtcgacaacataaaaatctgcagcaatgacactggctcaggccat
tttaaacgtatctgcatcacggtacgaatacctcgcaaccccaccattggtgacaagttt
gccagtcgccacggtcagaagggcatcctgagccgcctgtggccggctgaggacatgccc
ttcacagagagcggcatgactcccgacatcctgttcaacccccacggcttcccctcccgc
atgaccatcgggatgctgattgagagcatggccggcaagtccggcgcgctgcacggcctg
agccacgacgccacacccttcaccttctctgaggagaactctgcattggagtacttcggt
gaaatgctccgggctggtggctacaactactacggcacagagcggctctacagtggagtg
agcggtctggagctagaggccgacatcttcatcggagttgtctactaccagcggctgcgt
cacatggtctccgacaaatttcaggtgaggaccacaggagcacgagacaaggtgaccaat
cagccagtggggggcaggaacatccaggggggcatccgttttggggagatggagcgagac
gccctcctggcgcacggctcctccttcctgcttcatgatcgactcttcaactgctcggac
cgatcagtggctcaggtgtgcattgactgtggcagcctcctctcccctctgttagagaaa
ccaccaccctactggtcggccatgcgccaccgcaagactgtgtgcaccctgtgcggcaag
agtgactctattgactcagtgtctgttccttatgtcttccgctattttatagccgagctc
gcagcaatgaacatcaaagtcaaattagatgtgaagtga
DBGET
integrated database retrieval system
