Seriola dumerili (greater amberjack): 111220655
Help
Entry
111220655 CDS
T05606
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111220655
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111220655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
PAS_2
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
111220655
NCBI-ProteinID:
XP_022599540
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MVSHRSTKGASKARRDHINYEIRNMRALLPITQEDQERLSYLHSMAAICTYIRKSVLFRG
LPTEETSHCSLPYEAFLEALHGFILVTTTHGRLVYVSENVAEYLGLSMIDVLQGDTLYDM
VERSDVDTVKSNLDIESNSSSDRSFICCMQTSKAFKLQQGSCCSMLVRGSFQFFPQLCPS
SSAASPPATEPLFVALCTPTVNRLSSSDSHFCHSFSSVHRLDMTFTQLSDSVVYFLGYSA
DGMTGRSWYSLVHPEDLSSSADSHRSLMQTDEGFQVEMVLRLQRQDLTWPWIYIRANKDS
ECQSISCTNYIISETEARFLRQKISSDALRPSSLANSCHLAAPQAPRCQTYSNAKCFKRQ
RTSDSQSEEPGAKARRESERDVYYVARTSSQSDSSASPLGDSAALFTPPYSPASSGSPLQ
QEELSHDLLIDVHGYTDQLSSSPEGSPSYYSYPEAGLTCHQTPSDSLHAAAEQTFDQGAF
GALTARSPLSSSSPAYDFQACTSDARLVPDCLSASDMCESPVDCALHQDDFSHPEQPEEG
SLAQVHHVPHHVLPIHSSLLTPSQSPTSTEPNQYNEREQAEISILAQQISSLASSFDMYH
TLNPLHPAATDALPSACDWPHHPALPSVLPLKRELALDDGVFDSILKDLDMVARKSSTSG
PAAVSYSYQQGLVCSRSGPHHLEQESLGVSAATPEDPLPAEQFTAMDAFGLQLGHHDQNT
GLHQLNHYMQSSIQQDELAKENLY
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggtctctcacagatccaccaaaggagcatccaaagcccgacgggaccacatcaattac
gagatcaggaatatgcgggccctgctgcccatcacccaggaggaccaggaacgcctctcc
tacctgcactccatggctgccatctgcacctacatcaggaagtcagttcttttccgggga
ctcccgactgaggagacatcacactgctctctgccatacgaggcctttcttgaagccctg
catggcttcatcctggtcaccaccacccatgggaggctggtctatgtgtccgaaaatgta
gctgaatatcttggtctgtccatgattgatgtgcttcaaggagacactctctatgacatg
gtcgaacgctcagatgttgatactgttaaatcaaacctggacatcgaaagcaactcatca
tcagacaggagctttatatgttgtatgcaaacctccaaggccttcaagctgcagcagggc
agctgctgctccatgctggtcagggggagcttccagttcttccctcagctctgtccgtcc
tcgtctgcagcctcgccgcccgccaccgagcctctgtttgtggccctctgcaccccgaca
gtgaaccgcctgagtagttctgactcgcacttctgtcacagcttcagcagcgtccacaga
ctcgacatgaccttcactcagctgtcagacagcgttgtgtactttttggggtattcagca
gatggaatgaccggtcgatcgtggtacagtctcgtccaccctgaagacctttcgtcaagt
gcagattctcacagaagtttaatgcagacagatgagggcttccaggtagagatggtgctg
agactgcagcggcaggatctgacatggccctggatctacattcgagctaacaaggactct
gagtgtcagagcatcagctgcactaactacatcatcagtgaaacagaggccagatttctg
cggcagaaaatcagcagcgatgccctcaggccatcatctctggcaaattcctgccattta
gcagctccacaggcgccccgctgtcagacctacagcaacgctaaatgctttaaaaggcag
aggacatctgacagccaaagcgaggagccaggtgccaaagctaggagggagtccgagcga
gacgtgtactacgtggcgcgcacctcctcccaaagcgatagctcagcttctcctttgggt
gacagcgctgctctcttcacccctccctacagcccagcctcctccggctctcctctgcaa
caggaggagctcagccatgacctcctgatagatgtgcatggatacacagatcagctgtca
tcctctcctgagggctctccctcctattactcctacccagaggcggggctcacctgtcac
cagacaccttccgactccctccacgcagccgctgaacaaacctttgaccagggagccttt
ggggcgctcactgctcgctctccactctcctcctcatctccagcctatgatttccaagct
tgtacatccgatgctcgattagttccagactgcctgtctgcgtccgacatgtgtgagagc
ccagtggactgtgccctgcatcaagacgatttcagccatccagagcagccagaagagggc
agcctggcccaagtgcatcatgtgccccaccacgtgttgcctatacattccagtctcctt
acccccagccagtctcctacatccacagagcctaaccagtacaatgagagggagcaggca
gagatcagtattctggcacagcaaatctcctctctggccagcagctttgacatgtatcac
accctgaacccgcttcaccccgcagccaccgacgccctgccttcagcctgcgactggccc
catcaccctgctctcccttcagtcctccctcttaagcgcgagctggcccttgatgacggc
gtgttcgacagcatcttgaaagacctggacatggtcgcgagaaaaagcagcacgtccggc
cccgctgctgtgtcgtacagctaccagcagggtttagtttgcagcaggagcgggccccat
catttggagcaggagtccctgggtgtctccgcggccaccccggaggacccactgcctgca
gagcagttcactgccatggatgccttcggtctgcagctgggacaccatgaccaaaacact
gggttgcatcaactcaaccactatatgcagagtagcattcagcaagatgaacttgctaaa
gaaaacctgtattga
DBGET
integrated database retrieval system
