Seriola dumerili (greater amberjack): 111220736
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Entry
111220736 CDS
T05606
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111220736 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111220736 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
111220736 (pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111220736
NCBI-ProteinID:
XP_022599660
UniProt:
A0A3B4V5P9
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All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MPVRVVMQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAQANLCIGDMILAIDGEPTEHM
THLEAQNKIKGCIDEMVLSIDRSETKLWSPLSSEEGKTHPYKMNLASEPREVKHIGSTHN
RSALPFTGFGSKVVTNQYNSPSGLYSSENIKNFNSAVDEVKTMATPSEPNNKSPSDPSKA
GKRPPVAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTTKI
GSSVGNAEKLPVCDKCGSGIVGMVVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEDQIYC
EKHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccgggtggtaatgcagggtcctggaccctggggattcaggctggttggggga
aaggacttcgagcagcccctggctatttcccgggtcacccctgggagtaaagcagcccag
gccaacctgtgtatcggagacatgatcttggccatcgacggagagccgacagagcacatg
actcacttggaggcgcagaacaagatcaagggctgcatagatgagatggtactctccata
gacaggtcagaaacgaaactgtggtcaccgctttcatccgaggaagggaagacacatccg
tacaagatgaatcttgcatcagaacctcgggaagtgaaacacatcggctcgacccacaac
aggagtgcgctgccgtttactggttttggctccaaagttgtgaccaaccagtacaacagc
ccctctggtctttactcctcagagaacatcaagaacttcaactcggctgtggacgaagtt
aaaaccatggctacacccagtgagcccaacaacaaatctccatcagatccatcaaaggca
ggcaagcggccacctgtggctgcagattcagaggtctacaagatgctgcaggagaaccag
gagtctgatgagcctcctcgacagtcggcttcattcaaggtgcttcaggagattcttgag
acaggtgactctgataaaccatcagggtttaggagcgtgaaagcacccacaacaaagatt
ggctcatcagtggggaatgcagagaagctgccagtctgtgacaaatgtggatccgggatt
gtggggatggtggtgaagctgagggacaagttccgtcaccccgagtgctacacctgcaca
gactgcgacgtcaacctaaaacagaagggacatttctttgtggaggaccagatttattgt
gagaagcacgcacgggagcgagtgactccgcctgagggctacgacgtagtcacagtcttc
cccaagtag
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