KEGG   Seriola dumerili (greater amberjack): 111220736
Entry
111220736         CDS       T05606                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111220736 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sdu04990]
    111220736 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:sdu04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   111220736 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 111220736
NCBI-ProteinID: XP_022599660
UniProt: A0A3B4V5P9
LinkDB
Position
Unknown
AA seq 322 aa
MPVRVVMQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAQANLCIGDMILAIDGEPTEHM
THLEAQNKIKGCIDEMVLSIDRSETKLWSPLSSEEGKTHPYKMNLASEPREVKHIGSTHN
RSALPFTGFGSKVVTNQYNSPSGLYSSENIKNFNSAVDEVKTMATPSEPNNKSPSDPSKA
GKRPPVAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTTKI
GSSVGNAEKLPVCDKCGSGIVGMVVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEDQIYC
EKHARERVTPPEGYDVVTVFPK
NT seq 969 nt   +upstreamnt  +downstreamnt
atgcctgtccgggtggtaatgcagggtcctggaccctggggattcaggctggttggggga
aaggacttcgagcagcccctggctatttcccgggtcacccctgggagtaaagcagcccag
gccaacctgtgtatcggagacatgatcttggccatcgacggagagccgacagagcacatg
actcacttggaggcgcagaacaagatcaagggctgcatagatgagatggtactctccata
gacaggtcagaaacgaaactgtggtcaccgctttcatccgaggaagggaagacacatccg
tacaagatgaatcttgcatcagaacctcgggaagtgaaacacatcggctcgacccacaac
aggagtgcgctgccgtttactggttttggctccaaagttgtgaccaaccagtacaacagc
ccctctggtctttactcctcagagaacatcaagaacttcaactcggctgtggacgaagtt
aaaaccatggctacacccagtgagcccaacaacaaatctccatcagatccatcaaaggca
ggcaagcggccacctgtggctgcagattcagaggtctacaagatgctgcaggagaaccag
gagtctgatgagcctcctcgacagtcggcttcattcaaggtgcttcaggagattcttgag
acaggtgactctgataaaccatcagggtttaggagcgtgaaagcacccacaacaaagatt
ggctcatcagtggggaatgcagagaagctgccagtctgtgacaaatgtggatccgggatt
gtggggatggtggtgaagctgagggacaagttccgtcaccccgagtgctacacctgcaca
gactgcgacgtcaacctaaaacagaagggacatttctttgtggaggaccagatttattgt
gagaagcacgcacgggagcgagtgactccgcctgagggctacgacgtagtcacagtcttc
cccaagtag

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