KEGG   Seriola dumerili (greater amberjack): 111220816
Entry
111220816         CDS       T05606                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111220816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111220816
   03016 Transfer RNA biogenesis [BR:sdu03016]
    111220816
   03012 Translation factors [BR:sdu03012]
    111220816
   04131 Membrane trafficking [BR:sdu04131]
    111220816
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdu04147]
    111220816
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     111220816
Transfer RNA biogenesis [BR:sdu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    111220816
Translation factors [BR:sdu03012]
 Eukaryotic type
  Elongation factors
   111220816
Membrane trafficking [BR:sdu04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    111220816
Exosome [BR:sdu04147]
 Exosomal proteins
  Proteins found in most exosomes
   111220816
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 111220816
NCBI-ProteinID: XP_022599768
UniProt: A0A3B4TYX8
LinkDB
Position
Unknown
AA seq 462 aa
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASDKMGWFKGWKIERKEGGATGTTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPPNLTTEVKSVEMHHESLP
EALPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPQAADNFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVEKKLPSGGKVTKSAQKAEKKK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagacccacatcaacatcgtggtcattggccatgtcgactccggcaaa
tccaccaccaccggtcacctgatctacaagtgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgccgagatgggcaagggctccttcaagtatgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgatatcgctctgtggaagttc
gagaccagcaagtactacgtgaccatcattgatgcccctggacacagggacttcatcaag
aacatgatcactggtacctctcaggctgactgcgctgtgctggtcgttgccgctggtgtt
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgccctgctggcc
tacactctgggtgtgaaacagctcatcgttggtgtcaacaagatggactccaccgagccc
ccttacagccaggcccgttttgaggaaatcaccaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccactgttgcctttgtccccatctctggatggcacggagacaac
atgctggaggccagtgacaagatgggctggttcaagggctggaagattgagcgtaaagag
ggtggtgccactggtactaccctgctggaggctctggactccatcctgccccccagccgt
cccactgacaagcccctgcgtctgcccctgcaggacgtctacaagattggtggtattgga
actgtccccgtcggtcgtgttgagaccggtgtcctgaagcctggcatggtcgtcaccttt
gctccccccaacctgaccactgaggtgaagtctgtggagatgcaccacgagtctctgcct
gaagctctccccggtgacaacgtcggcttcaacgtcaagaacgtgtccgtcaaggagatc
cgtcgtggaaacgtggctggtgacagcaagaatgacccaccccaggctgctgataacttc
accgctcaggtcatcatcctgaaccaccccggccagatctcccagggttacgcccccgtg
ctggactgccacaccgctcacatcgcctgcaagttcagcgagctgaaggagaagatcgac
cgtcgttccggcaagaagcttgaggataaccccaaggctcttaagtctggagacgccgcc
atcatcaccatggtgcctggaaaacccatgtgtgttgagagcttctcccagtatccccca
ctgggtcgcttcgctgtgcgtgacatgaggcagaccgtggctgtcggcgtcatcaagtcc
gtcgagaagaagctcccctccggtggaaaggtcaccaagtctgcacagaaggccgagaag
aagaaatga

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