Seriola dumerili (greater amberjack): 111220827
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Entry
111220827 CDS
T05606
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111220827 (chd9)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111220827 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
111220827
NCBI-ProteinID:
XP_022599789
LinkDB
All DBs
Position
Unknown
AA seq
3033 aa
AA seq
DB search
MDFFDDPSLFVGGLEGLDEDEFPSAPSLVDELNLSADFEPLQVEPLGPGKHQDIMPPVST
QQVMPTYSQQMDHYIGIKAQNPTGQAFSGPGGTGGVGSGMMPEQHGQYHNAAMSQVPQSN
GLFCNSSSPMWGNQDQNGNMYHHIAQQQQHQRQQLCHQQQPLHNQQLHVRQQQIQQQQHH
PCHRQQQEQQHRMRQQQQQQQQQQQQQQQLQQQQSHQQQLLNQRQHQQINTQTMSLQQQQ
HHNFSFHQGGQSQQPVHHSQQRVQHQLTVGGPRFQSRALPSKSYLDSQNASLSGTCLQPH
QQQHGRYQLTRGGQAFSGSGPEDPNLPFSIHSSSMVHSLPTCSVSSATAYQPAQYPAYPG
EPEIPSLNQQSLSSASVSGPTATAPLTSTVPELSGPLCQFPSTSVMSQQHTRIPVSQAEE
CPFRALRCSRETQVNCRSSEMFGESMSCYPSMTNQLPSEQPQSCGAINTNGYQALGDSLL
TSDAQDGDLEGLQPPDLLPDLLPQLEAALSQQDDSNCSWANSSVEGGHEHRKPPPVEYKE
EKPRKNANGPGSQVRVLSPPVKSSSSSSSSSSSSSSSSSSSSEKRTPRRTHHQMDSTPQD
KQEKANRIISEAIAKARQRGEKNIPRVMSPESFPSSSSQYKAHRDREHKGNRKARPKEKA
CRKACIVPSSKPKQKAKIGKIVIKIGKKKKRKPESSEESDDDPPPRHTSKDADSKRRSNR
QVKRKKYAEELEARLSDEEVKVIVKAKKTSTAASKEPALQLFVENPSEEDAAVVDKIMSS
RIVKKEVSPGVVVEVEEFFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKMKQAQRAL
FFADMEEDPFNPDYVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQ
SKIEEFEQLQAAKPDSRRVERPPANLWKKREQSREYRNGNSLRDYQLEGVNWLLFNWYNR
RNCILADEMGLGKTIQSITFLEEIHRVGIKAPYLIIAPLSTIANWEREFRTWTHLNVIVY
HGSMVSRQMLHQYEMYFRDAQGRAMRGAYRFQAVITTFEMILGGCPELNAIDWRCVIIDE
AHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEF
GDLKTEEQVQKLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF
SFLAKGAGQANMPNLVNTMMELRKCCNHPYLIKGAEEKILEDFKEVYSPTAMDFHLQAMV
QSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQ
AAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQN
KAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGAGGGAVQQQQLSKK
EIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASG
NRTDIALDDPNFWDKWAKKADIDMDMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEG
ESENDETKPKLRRNHDRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVE
SICRALLSYCLVHYRGDDKIKSFMWDLIAPTEDGRTKELQNHLGLSAPVPRGRKGKKMKT
QSSSFDIHKAEWLRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGNQAQNV
LDGVDSSEIKIWVPEPDHSELPALWWDAISDKCLLLGVYKHGYEKYNTIRADPTLCFLDR
VGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDAVP
VTEGETAYWPSSSVLTARLRRLITASQRYTKSRQILHIHQTQSQSQQTMVLSTPLCPLPP
TLNDTLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPNLGQFDWTKFRAMARLHKK
TDESLQKYLCAFTAMCRRVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVELLRQVRE
QVLRHSLLYERLSLCQMSSDLPVWWEAGTHDHDLLIGAAKHGVSRTDYHILRDPELSFMA
AQRNYSQTKAAQQQSRCTSTPLLHPQHQATSSVMTGSPLPPAAQRDTEPFGVVPKVEPAS
EGEESREKQGESWSPPRAPATPTGLEQKPVSETRDSERQMVAARTKPLTPNSSERKPKKA
SKRGRREARRGSESNSDGSSSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSS
SSSSSSSDDSESEGEEGKKKVPAATSVKGFDEDSVASLSTTQDETQDTHVAENGITNNSS
HPLQGGGYMLAASYWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLD
NANSLCEDPSASPQGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGP
QAQQQYLARLHELQSASDTGLTDITKPQCSFQTGLTGQMRLNGVVDGQPVIKKRRGRRKN
VEGMDLLFMNRSRVPAVPDQVPPGWGGIGQVGVAAASAPGYSQSSAQVPADTESRVPVIN
LKDGTRLAGDDAPRRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRC
RNPNKIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVK
QSGYLPESMFDRILTGPIVPEEVSRRGRRPKNPLAKAAAAAAAAAPNTAASALGLNPLLA
NGLLSGMDLTSLQAFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGL
PNLLGMSSLLGKPAQEGTGSSEEKTKGTTSGVTGEPSASKAPSHTSDTKGERTEGSNATP
SSTSSSSSSATAPQSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVSATQPQSS
NSDPTLPPAPLPPQPAASKSSPRETEQPAAEKDGEEEDEALEEALDEEEEEEEESAEQKE
NSGPEGSGKAESSSSESGSSSSSSDDSDSSDED
NT seq
9102 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgacgatcccagcctctttgttggaggtttggaaggactggatgaggat
gagtttccctcagcaccatcacttgtggatgagctaaacctcagtgctgactttgaaccc
ctccaagtggagcctttaggcccagggaagcaccaagacataatgccaccagtttctacc
caacaagtcatgcccacttacagtcagcagatggatcactacattggcattaaagcacag
aatcctacggggcaggcattttctggtcctgggggcacaggtggtgtaggcagtggcatg
atgccagagcaacatggccagtaccacaatgccgccatgagccaagtacctcagtccaat
ggtctgttctgtaacagtagcagtccaatgtggggcaaccaagaccagaatgggaacatg
taccaccacatagctcaacagcagcaacatcagcgacaacagctttgtcatcagcaacag
ccactgcacaaccagcaacttcatgtcagacaacaacaaatacaacagcaacaacaccac
ccctgtcatcgtcaacaacaggagcagcagcacagaatgcggcagcaacagcagcagcag
cagcagcagcagcagcagcagcagcagctacaacaacagcaaagtcatcagcaacagctg
ttaaaccagcgccagcaccaacaaattaacacgcagactatgtctctgcagcaacagcaa
catcacaatttctcatttcaccagggaggtcagagccaacagccagttcatcatagtcag
cagcgggttcagcaccaactaactgtaggaggaccaaggttccaatcaagggctttgcca
agtaagtcttatttagatagtcagaatgcttctttgagtgggacttgcttacaaccacat
cagcagcagcatggtaggtaccagttgaccaggggaggccaagccttctctggatcaggg
ccagaagaccctaacctgcccttctccatacattcatcatctatggttcactccctgccc
acatgctcagtcagttctgccactgcttaccaaccagctcagtaccctgcttaccctgga
gagccagaaatacccagtctcaatcagcagtctttgtcctcagcctcagtatctgggccc
accgccactgcacccctcacttccacagtgcctgagctctcagggccattatgtcagttt
ccatccaccagtgttatgagtcagcagcacacaaggatcccagttagccaggcagaagaa
tgtcctttccgggccctacgttgttccagagaaacccaggtaaactgcaggtcatctgag
atgtttggtgagtctatgagctgctaccccagcatgaccaaccagctgccttctgagcag
ccccagagctgcggggccatcaacactaatggataccaggctttgggagatagtctcctg
acatcagacgctcaggatggagacttggagggactacagccccctgacctcctccctgac
ctactgccccagctggaggctgctctcagccaacaggatgactccaactgttcctgggcc
aattccagcgtggaggggggacatgagcacaggaaaccaccacctgttgagtacaaggaa
gagaagccccgaaagaatgctaatggtcccggtagccaggtgcgggtcctcagtccccca
gtgaaaagcagctcatcgtcctcctcctcttcctcatcgtcttcgtcttcgtccagctcc
tcatcggagaagaggacaccgcggaggacgcatcatcagatggattcaactccacaggac
aagcaggagaaggccaataggataatatcagaggctattgcaaaggcccggcagcgtggg
gagaagaacatcccccgggtcatgagccccgagagcttccccagctcttcctcacagtac
aaggcccaccgtgaccgcgagcacaaaggaaacagaaaggcacggcccaaagagaaggct
tgtaggaaagcctgcattgtaccctcctccaagcccaagcagaaggccaagattgggaaa
attgtcatcaagattggaaagaagaaaaagcgaaagccagagtcctcagaggagtcggat
gatgaccctccccctcgacacacttctaaagatgccgactctaagaggagatcgaatcga
caggtgaagagaaagaaatacgctgaggagctggaggctaggttgtcagatgaggaagtc
aaggttattgtcaaagccaagaaaaccagcacggcagcatccaaggagccagctcttcaa
ctctttgttgagaatcccagtgaggaggacgctgctgttgttgacaaaatcatgtcttct
cgtattgttaagaaggaggtatctccaggagtggtggtcgaagtggaagagttttttgta
aaatacaaaaactactcctacctacactgtgagtgggccacagagcaacagctggagaag
gacaagaggattcagcagaagatcaaacgcttcaagatgaaacaagcacagagggcactc
ttctttgcagatatggaagaggacccctttaaccctgactatgttgaggtagatagagtg
ctggaggtgtcgtattgtgaagacaaggacacaggagaggaggtggtgtactacctggtg
aagtggtgctctctgccttatgaggacagcacctgggagctgaaggacgacgtagatcag
agcaagattgaagagtttgagcagctgcaggcagccaagccagactcgcgcagggtggag
cggcccccagccaatctgtggaagaagagggagcagtcgagggaatacaggaatggcaac
agcctcagggactaccagctagagggagtcaactggctcctcttcaactggtacaacaga
cggaactgcatcttggcagacgagatgggcctgggaaagaccatccagtccatcacattc
ctcgaggagatccatcgtgtgggcatcaaggcgccatacctcattattgctccgctctcc
accattgccaactgggagcgcgagttccgtacttggacccatctcaatgtcatcgtctac
catggaagcatggtcagcaggcagatgctccaccagtacgagatgtatttcagggatgca
cagggccgtgcgatgcgaggggcctacaggttccaggctgttatcaccacgtttgagatg
atcctgggaggctgtcccgaactcaacgccatagattggcgctgtgttattatcgatgaa
gcccaccgtctcaagaacaagaactgcaagctactggagggcttcaagcttatgagcctg
gagcacaaggtcctactgacaggcacgccgctacagaacacagtggaggagctattcagc
ctgcttcacttcctggagcctgcacgcttcccctcagaaaacaccttcatgcaggaattt
ggagacctcaagacagaggagcaggtgcagaagcttcagggtatcctgaagcccatgatg
ctgcgccggttgaaggaggacgtggagaagaagttggctcctaaagaagagaccatcatt
gaggttgagctcaccaacattcagaagaaatactaccgtgccatcctagagaaaaacttc
tctttcctagctaaaggagctggccaggcaaatatgcccaatctggtcaacaccatgatg
gaactgagaaagtgctgcaaccacccctacctcattaaaggggcagaagagaagatcctg
gaagacttcaaggaagtatatagccccactgccatggactttcacctgcaggccatggta
cagtctgcagggaagctggtccttattgacaaacttcttcctaagatgaaggctggaggg
cacaaggtgctcatcttctcccaaatggtgcgctgcctggacatcttggaagactacctc
attcagagaaggtacttgtatgagcggatagatggacgtgtccgtgggaatctgcggcag
gctgccatcgaccgcttcagtaagcccgactcagaccgcttcgttttccttctgtgtacg
agagccggtggcctcggaatcaacctcacagcagcagacacctgcatcatctttgactct
gactggaacccacagaacgacctgcaggcccaggctcgctgccatcggatcggtcagaac
aaggcagtgaaggtgtaccgactgatcaccaggaactcgtacgagcgggaaatgtttgat
cgtgccagtctcaagctgggcctggacaaagcagtgttgcagagcatgagtggccgagat
aacagcctgggaggaggcgccgggggaggggcggtgcagcagcagcagctgtctaagaag
gagattgaggatctgttgcgacgtggtgcttacggggccatcatggatgaggaggatgaa
ggggccaaattctgtgaggaggacatagatcagatcctccaacgcaggacaaagaccatc
accattgagtctgagggacgaggctccacctttgctaaggccagttttgtggcgtccgga
aaccgcacagacattgctctggatgaccccaacttctgggacaagtgggccaaaaaggct
gacattgatatggacatggtcaatggcagaaacagtttggtgattgacactcctcgtgtc
agaaaacagacgaggccgttcagtgccaccaaggatgagctggcagagctttcagagggt
gagagcgagaatgatgagaccaaacctaagctcaggcgaaaccacgaccgcctcaacagc
tatggacgcacagagtgcttcagggtagagaagaacctgcttgtatatgggtggggtcgt
tggaaggatattctcaaccatgggcgttttaagaagcagctcacagagtgggatgtagag
tcaatctgcagggccctgctgtcctactgcctagtccattatcgtggagatgacaaaatc
aaaagcttcatgtgggacctgattgcccctactgaggacggacgcaccaaggagcttcag
aatcacctgggtttgtctgccccagtccctcggggcagaaagggtaagaagatgaagaca
cagtccagctcttttgacatccacaaagctgagtggctcaggaaacacaacccagagcac
atgcttcaggatgatggctacaagaaacacctcaaacaccactgcaacaaggtgctgctc
agggtcagaatgctctactacctgaaacaagaggtgataggaaaccaggcccagaatgta
ctagacggcgtggactccagtgagataaagatttgggtgccagagccagaccactccgag
ctgccagccttgtggtgggatgccatctccgacaagtgtctattgctgggtgtatataag
catggttatgagaagtacaacactattcgtgcagatcctaccctgtgtttcctagaccgt
gtgggacgaccagatgagaaggccatcgctgctgagcagagaggcaatgattttatggat
ggggatgtggatgatccagaatacaagcccgctccagcactgttgaaggacgatatggag
gatgatgcctcttctcctggagacttggttgtcactgacaatgctggagatgcagttcca
gtgacagagggtgaaactgcctactggccgtcctcctcagtgttgactgccaggctgagg
cgtctgatcacagcctcccagcgctacaccaagagccggcagatcctccacattcaccag
actcagtctcagtcccagcagaccatggtactgtctactccgctctgcccactgcccccc
acactcaacgacaccctcaatcccaagatggctgctaagattgaacgccaacaaagatgg
accagacgagaagaagctgacttctaccgggtggtctccactttcggcgttgtttttgat
ccaaaccttggccagttcgactggaccaagttcagggccatggctcggctgcacaagaag
accgacgagagcctgcagaaatacctgtgtgctttcaccgccatgtgccgacgggtgtgc
cgcctgcctcccaaagagggagactctgcggttgacccgtctctgaccatccagcccatc
acagaggagcgagcgtctcgtaccctgtacagagtagagctgcttcgccaggtgagggaa
caagtccttcgacattcgttactctatgagcgcctgtcgctgtgccagatgagctctgac
ttacccgtctggtgggaagccggtacccatgaccatgacctgctaattggtgccgccaag
catggtgtcagccgcacagattaccacattttgagagaccctgagctcagcttcatggct
gcccagcgcaactacagccaaacaaaagctgcacagcagcaatcacgctgcacatccacc
ccactcctacaccctcagcaccaggccaccagctcagtgatgacaggctctccgctgcct
ccagcagcccagagagacacagagccctttggggttgtgcccaaagtggaaccagcctct
gagggggaggagagcagggagaaacagggcgagagctggagccctcctcgagcaccagct
actcccacaggtctggaacagaagcctgtttctgagacacgggacagtgagaggcagatg
gtggcagcacgaaccaaacccctcacacccaactcctctgagaggaaacccaagaaggcc
agcaagaggggccgcagggaggccaggcgtggctcagagtctaactcagatggctcctct
tcaagctcatcatcgcggtcctcctcctcttcgtcatcttcctcttcttcctcatcacat
tccgggtccagctcctcctcctcttcttcgtcttgctcctctggctcttcatcgtcgtcg
tcgtcctcctcatcatcttctgacgacagcgaaagtgagggagaggaagggaagaagaaa
gtgcctgcagcaacaagtgtaaagggcttcgatgaggacagtgtggcatctctgagcact
acacaggatgaaacacaagacacccatgtcgctgagaacggcatcaccaacaactcctcg
catcctttacagggaggaggatacatgctcgctgcatcctactggccaaaggatcgtgtg
attatcaaccgcctggacagtatctgccaggcagtgctaaagggcaagtggccaggaaca
cgtcgggtctacgagcctggaggtgcggtggcctccttctacaccaccaagctgctggac
aatgccaacagcctgtgcgaggacccctctgcctcaccacaggggtcaaaggtgaccaag
catgttgcagaaaacaaggagttctcagtaaaactcaacgatcaggagggaggtctgaag
ctgaccttccagaaacagggtcttcctctgaagaggcccctggaatctgaagagggcccc
caggcccagcagcagtacctggcccggcttcatgagctgcagagtgcctcggacacaggc
ctgactgatatcaccaagcctcagtgcagctttcagactggtcttactggtcagatgagg
ttgaatggagtagtggatggccaaccggtgattaagaagcgaaggggaaggaggaagaac
gtagaggggatggacctgctctttatgaacaggagtagagtccctgcagttcctgatcag
gtgcctccagggtggggtggtattggccaggtgggtgtggctgcagcctctgcaccaggc
tacagccagagctcagctcaggtcccggcagacacagagagcagggtcccagtcatcaac
ctcaaagacggcacccggcttgctggggatgacgcccccaggaggaaagatctagaacag
tggctaaaagaacatcccggctttgtagcagacacaggagccttcatccccggtgtaaat
aagatgcaaatgcagttccacttccaggatggtcggccaaagcagaagaggcaccgctgt
aggaaccccaacaagatcgatgtcaacagcctgacaggagaagagagggtccaaatcatc
aacaggagaaatgcacgcaaggttggtggagcctttgctcctcctctgaaggatctgtgc
cggttccttcaggagaacccagagtacggcgtcccacctgaatgggcggatgtggtcaaa
cagtcgggttacctcccagagagtatgtttgacaggatcctgacaggacccatcgttcct
gaggaggtgagtaggcgtggacgtcgacctaagaatcctctggccaaggcggcagcggcg
gcggcggcggcagcacccaacacagcagcctctgccctcggtctgaaccccctgctggcc
aatggcctcctctctggaatggacctcaccagcctgcaggccttccagcaaaacctccag
agcttacagtccctgcagctcaccgcaggcctgatggggctgccgtccgatgctagcaac
ctggctgcaagcaacctagctgccatgtttcccatgatgctgtcgggtatggctggattg
ccaaaccttcttggcatgagcagcttgcttgggaagcctgctcaggagggcacaggaagc
tcggaggaaaagacaaagggaaccaccagcggtgtaacaggagagccgtctgcctctaaa
gccccttctcacacctcagacaccaaaggagaaaggacagagggctcgaacgcgactcct
tcctcaacttccagctccagttcctctgccaccgccccacaaagtgcttcagctgcctct
gcagcctccagtcacccactgtctcttaaccccttgttactctccagtatgctttaccca
gggatgcttctcactccaggccttaaccttcctgtgtctgccacacagccgcagagctca
aacagtgaccccacccttcctcctgctcctcttcctcctcagcctgcagcctccaagtca
tcgccaagggagacagagcagccagcagcagagaaggacggagaggaggaggatgaggcg
ttagaagaagctttggatgaagaagaagaagaggaggaggagtcagcagaacaaaaagag
aacagtggtcctgaaggttcggggaaagccgagtcatcttcatcagagtctgggagctct
tcctcatcctcagatgattcagactccagtgatgaggactga
DBGET
integrated database retrieval system
