Seriola dumerili (greater amberjack): 111220926
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Entry
111220926 CDS
T05606
Name
(RefSeq) uncharacterized protein LOC111220926
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111220926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111220926
Membrane trafficking [BR:
sdu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111220926
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
111220926
NCBI-ProteinID:
XP_022599944
UniProt:
A0A3B4UMJ2
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MSRAEQKDRGLSTSEDSLLCFHNSKAEPLIRGRPLSDIYPFQSQCDRSAVPYLLSGCGAQ
VQPMTAGPLTDENKLNGINSSAWSNPVIGQPEGKPYSSRIMRLFSNSRKGHVPAHSPTTD
SPTSVHSKDGNSGPQSWSGLSGLGVVDSFKKLRSSVLQGIQSKGASNHDGEHDLSSNQEM
ANGTVVAKADPGLDDGMNHLKSAEGYSVCNGNFTGQNLAFNRCGSDIDDYDDEENDEGDG
LTRNSRFSRSMRRAYGAGRISLLDMGNGRVAGSSTMGAADSQRPGQTSEVGVQAENMSNT
NVKVLSRMSKSAENLHIFKAPFRRRAPSPGPPSPQEDPQSITTSNRTPSIQRTASASSVD
LRSHAVNRRKSPVKTKGPMLKLVGSMTDLTVRRRRSPSPSPTSPSPMSPLTRLHDDYSRR
VPCLQTGERQRRPSPVRARVMSVEHTPLVHHQPEYDGGPQQHQVLISSVSVDPPETIDTS
PGISAHYESQAVATTSGYKRIAACDSSPLSQKESSQQQEQTEVKSLPSKVTSEQEREELL
QTDEVSPTTSSITPPISPTCLSESPTSPTSSTKAAASPTETSSVKPRRRAGHPRPRPISD
YGQLISRKHSIPEEVAELHAEERTENTSLHKDCSDNDTYGDGESPEKFSVNGDVQCRRYR
PISVIGVVDVFPPDAEEKDDRLPSPLSRPPIPSHQVPPYRAVSARFRPSALSQSTPIGLD
RVGRRRLHRVLSDGVSDCSATLDDSVSEEEEGSFDELADVTPYLQPGVEISVLNERISSG
HTVYAEALWDHVTMEEQELAFKAGDVIRVLDASHKDWWWGRGADREAWFPSCFVRVRVNQ
EDSSAESVESVADQEDPTPRDTHSAQHKEQMRTNVVQEIMNTERIYIKHLKDICEGYIRQ
CRKHPQMFTELQLKTIFSNIEDIYKFHRQFLKDLEKKYNKDQPHLSEIGSCFLLQGEGFS
IYSEYCNTHPAACAELQRLMKLGRYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQ
LGELLKYTPKDHSDYGGVSKAYEAMKNVASLINERKRRLESVDAIAHWQVAILHWEGPDV
LERSSELIHSGELTRIVRQGKMQQRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDQTEV
VDVPDGRDPDLGLTLRNALRLRHASTLELVCVLCCRKAQDKQRWLEAFAKERHRVKEDQE
MGMEISEEQRKQAIVNARRGKQGKIKPIGYSGSVPPHHQNLHPLHQRHITIPTRVPQQQV
FSLAEPPKRKPYHLLYSITRNAFFRK
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacaaaaggacagaggcttgtccacaagcgaagactctctcctgtgt
ttccacaactccaaagctgagccgttgatccgaggccgacccctcagtgatatataccca
tttcagagtcagtgtgacagaagtgcagtcccttatctgctgtctgggtgtggcgcccaa
gtacagccaatgactgcaggtcctctcactgatgagaacaaactgaacggcattaactcc
tccgcttggtccaaccctgttataggtcaacctgaaggaaagccttactcctcaagaatt
atgaggcttttttctaactcgaggaagggccatgtccctgctcatagtccaaccactgac
agccccacctcagtccacagcaaagacggcaacagtggcccccagtcctggtcgggactt
tcaggactgggtgttgtggactccttcaaaaagctccgctcctccgtgctgcagggaatt
cagagtaaaggggcatcgaaccatgatggagagcatgatctttcatcaaatcaggaaatg
gctaatggcacagttgtggcaaaagctgaccctggtttagatgatggaatgaatcattta
aagtcagcagaaggatacagtgtgtgtaatggaaattttactggacaaaatttggctttt
aaccggtgtggctcagatattgacgactatgacgatgaggaaaatgatgaaggagacggt
ctcacgcgcaactcacgattctcaaggagtatgaggagagcatatggagcaggacgcatt
tctttacttgacatggggaatgggagagttgcaggaagcagcacaatgggagctgcagac
agtcagagaccaggtcagacatccgaggtcggtgtccaagcagagaacatgagcaacaca
aatgtgaaggtgctgagcagaatgagcaaaagtgcagaaaatcttcatatatttaaggca
ccattcagacgcagagccccatctccaggtcccccttcacctcaggaagacccacagagt
attaccacgtcaaacaggacaccaagcatccagagaacagccagcgcctcctcagtggac
cttcgaagccacgctgtgaaccgcaggaagagccctgtgaagaccaagggcccgatgctg
aagctagtagggagcatgactgacctaactgtccgacgcaggagaagtccctcccccagc
cctacatctccatctcccatgtcacccctgactcgtctccacgacgactactcccgccgc
gtaccttgcctacagaccggtgaacgacagcgccggccttcgcccgtcagagcccgggtc
atgtccgtcgaacacacaccgctggttcatcatcagcctgaatacgacggcggcccacaa
cagcaccaggtccttatcagttcggtttccgtggatcccccagagacaatagacacttca
cctggtatctctgctcattatgagtcgcaggccgtagccacaacaagtggttataaacgg
atagcagcttgcgattcatctccactcagccaaaaagagtcttcacaacaacaagaacag
actgaggtcaagtcgctaccaagcaaggtgacatcagaacaagagcgagaagaacttctc
caaacagatgaagtctctccaacaaccagcagcatcacacctcctatctccccaacatgc
ctctcggaatcacccacatcgcccacatcatccacaaaggcagccgcgagtcccacagaa
acatcctccgtcaagcccaggcgaagggccgggcatccgagacctcggccaatttctgac
tacggtcagctcatttccaggaagcactccattcccgaggaagttgctgaactgcatgcc
gaggaaaggacagaaaacacatcactgcataaagactgcagcgataatgacacctatggg
gatggagagagccctgagaagttcagcgtgaatggggacgttcagtgcaggaggtatcgg
cccatctcagtgataggagtggtggatgtgttcccccctgatgctgaggagaaagatgac
cgccttccttctcccttgtcccggccgcccatcccctcccatcaggtgcccccctacaga
gcagtgtctgccaggtttcgcccctcagccctctcccagagcacccccatcggactggat
cgcgttggacgacgaaggctccacagagtgctcagtgatggtgtgtctgactgttcggcg
acacttgatgacagcgtcagcgaggaggaggagggcagcttcgatgagctcgctgatgtc
acgccctacctccagccaggggtggagatctctgtgctcaacgagaggataagctcgggc
cacacggtgtatgctgaggctctctgggaccatgtgaccatggaggagcaggagctggcc
ttcaaggccggagatgttatccgtgtcctggatgcctcacacaaggactggtggtggggc
aggggggctgacagggaggcctggttcccctcctgctttgtgagggtgcgagtgaaccag
gaagactcgagtgcagagagtgtggagagtgtagcggaccaggaggatccgactcccagg
gacacgcacagcgctcagcacaaggagcagatgagaaccaatgtggttcaggaaatcatg
aataccgaacgcatctacatcaagcacctcaaagacatctgtgagggttacatccgccag
tgccgtaaacacccgcaaatgtttactgagctgcagctgaagaccatcttcagcaacata
gaggacatctacaaattccacaggcagtttctgaaagacctggagaagaagtacaacaaa
gaccaaccgcatctcagtgaaataggctcctgttttctcttgcagggggagggcttctct
atctactcagagtactgtaacacccatccagcggcctgtgctgagctgcagcgcctcatg
aagttgggccgatataaacatttctttgaggcctgccgtctcctccagcagatgatcgac
atctccattgctggtttcttgctcacgcccgtgcagaagatctgtaaataccccctgcag
ctgggagaactgctcaagtacacccctaaggaccacagtgactacggcggagtgagcaaa
gcatatgaggctatgaagaacgtggccagtctgataaatgagaggaaaagacggctagag
agtgttgacgccatcgctcactggcaggttgccattctgcactgggagggacctgatgtg
ctggagcgcagttcagagctgatccactctggcgagctgactcgaatcgtccgacaaggc
aaaatgcagcagcgcagcttcttcctatttgaccaccagttggtcttctgcaaaaaagac
gtcctgcgcagggatctgctccactaccggggacggctggatatggaccagaccgaggtg
gtggacgtgcccgatgggcgggacccagacctgggcctgaccctgaggaacgctctgcgc
ttgcgccacgcctccactctggagttagtgtgtgtgctgtgctgcaggaaggcccaggac
aagcagaggtggttagaggcttttgccaaagagagacacagagtcaaggaagaccaagag
atgggaatggagatcagtgaagagcaaagaaaacaggctattgttaatgccagaagaggc
aaacagggaaagatcaaacccattggttactcgggttctgtcccacctcaccaccaaaac
cttcacccacttcaccagcgtcacatcaccattccaacccgtgtgcctcagcagcaggtc
ttttcactggccgagcccccaaaaagaaagccttatcacctgttgtacagcatcactcgc
aacgcctttttcaggaaatga
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integrated database retrieval system
