Seriola dumerili (greater amberjack): 111220967
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Entry
111220967 CDS
T05606
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111220967 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111220967 (arfgef1)
Membrane trafficking [BR:
sdu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
111220967 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
111220967
NCBI-ProteinID:
XP_022599997
LinkDB
All DBs
Position
Unknown
AA seq
1940 aa
AA seq
DB search
MFEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQHSPVTQHTEPDSPQLQTHIHPPAKGPTQEANGPVTPPTPSVTIPSTPSTPSTPAP
EGSSRSVSGEQEEQGPVYESPDPENGSDFCVAENEQTEADQATAAAQNAAAQQHPEAGEE
EEGTPNYEEKAQEIVQSILQEVVNTVAGGHCLDPANLCSDTKESGGEGEPAESEPAEAVT
EGTQSSLEDEGTLGSDSEHIHANGIPGTPISASFTPSLPDDRLSVSSNDTQESGAAPGQP
PGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQNAGPI
FKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQIEVFFKEI
FLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIA
QGRGGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQEKPSEQES
TETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFN
KKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYAYVDQM
DFQGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYS
IIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMKETKEL
TMKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLA
WTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTAS
SGISEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVKARYISGT
VRGKEGFVASTKEQSNDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAVDRIFTGSTR
LDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDH
FNKVGCNSNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRD
MVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTNVFEKHFA
ATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSDDMNVAPE
DRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFRIVFRI
FDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLNDVLLDDILAQLYWCVQQDNE
QLARSGTNCLENVVILNGEKFSPETWDKTCNCMLDIFKTTIPHALLTWRPAGAEGEHLTT
QSLSDKQLDSISQKSLDIQSRSDDQHSISSADRVAMENRRQSQYSAASGMCEDGSRGRTP
TKVQEQRLFSALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDAVYAADVPVE
TQNQGMYRYLTSEQLFKLLDCLLESHRFAKAFNSNNEQRTLLWKAGFKGKSKPNLLKQET
SSLACGLRILFRMYTDESRQDAWAEVQRRLLNVCSEAVAYFLALTSESHREAWTNLLLLF
LTKVLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVFNIAQLPEPQP
THAEQETDTEVGEEAGEEAQ
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagggcaaaaagacgaaaaacatgttcctaacacgagctttggaaaagatcctg
gccgacaaagaggtgaaaaaggctcaccattcacaactgcgcaaagcctgcgaggtggca
ctagaggaaatcaaagaggaatcagaaaaattaagtccccccagtggagacggcaaatct
ggttccagcactttaccgccaatcaaatcaaagaccaacttcattgaagccgacaagtac
ttcttgccgtttgagctggcatgtcagtccaaatgtccccgcattgtcatcacctcgctc
gactgtttacagaagctgatagcgtatggccacctgacagggagcgccccggacagcacg
gccccaggcaagaagctcatcgacaggatcatcgaaaccatctgcgcttgtttccaaggg
ccgcagactgatgagggcgttcagctacagattattaaggctctgttgacagcggtaacc
tctcagcacatagaaatccatgagggcaccgtcctgcaggccgtccgcacttgttacaac
atttacctggccagcaagaacctcatcaaccagaccacagcaaaggccacgctcacacag
atgctcaacgtcatctttgcacgcatggagaatcaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagcaaagcagctggagaga
gagcggcaccggcagcactccccggtcacccagcacactgagccagactcccctcagctc
cagactcacatccacccgccggccaagggtccaacccaggaggccaacgggcccgtcacc
cctccaacccccagcgtcaccatcccatccaccccgtccaccccgtcgacaccagccccg
gagggcagcagcaggtctgtgtcgggagagcaggaggagcaggggcctgtctatgagagc
cctgatccagaaaatggttctgatttctgcgtggctgaaaatgaacagactgaggcagac
caagctactgcagcagcacagaatgcagcagcacagcagcatccagaggcgggtgaagag
gaggaggggaccccgaactatgaggagaaagcccaggaaatagtccagagtattctgcag
gaggttgtcaatactgttgcaggaggacactgcctggaccctgcgaacctctgctctgac
accaaggagtctggtggtgagggtgagcctgcggagtcagagccggctgaagcggtgaca
gagggcacacagagctctctggaggacgagggcaccctgggtagcgacagtgagcacatc
catgccaacgggatccccggcacgcctatttctgccagcttcaccccctcgctgcctgat
gacagactgtctgtctcatccaatgacactcaggaatcaggagcagcaccgggccagccg
cctggtgctaaattctcccacatcctccagaaagatgccttcctcgtctttcgctcactc
tgcaaactgtcgatgaagccactgtcagacggaccacctgatcctaagtcccacgagctg
cgatcgaaggtcttgtccctccagctgctgctgtccatcctccagaacgccgggcccatc
ttcaagaccaacgagatgttcatcaacgccatcaagcagtacctgtgcgtggccctgtcc
aagaatggcgtctcctctgtgcctgaggtcttcgaactctcactatccattttcctcact
ctgctctcccacttcaagacgcacctcaagatgcaaatcgaggtgttcttcaaggagatt
ttcctgtacattcttgagacgtccacaagctcctatgaccacaagtggatggtcatacaa
accctcactagaatatgtgcagatgcccaaagtgtggtggacatctacgtgaactatgat
tgtgacttgaatgctgctaacatatttgagcgtttggtcaacgacctctcgaaaatcgca
cagggtcgcggtggccatgagcttggcacaacaccactacaggagctgaccctgagaaag
aaaggccttgaatgtctcgtgtccatcctgaagtgcatggtcgagtggagtaaagaccaa
tatgtcaaccccaactcccagaccagcctcggccaagagaaaccatcagagcaggagagc
acagagaccaaggctcctgagaccataaaccgctatgggagcatcaactctctggactcc
acagcctcatctggcatcggcagctacagcacccagatgtcaggtactgacaaccccgag
cagtttgaggtcctcaaacagcaaaaggagatcatcgagcagggcattgacctcttcaac
aagaaaccaaagagaggaatccagtaccttcaagagcaaggcatgctgggtacaacccca
gaggaccttgctcagttcttgcaccaggaagagaggcttgattcgacccaagtgggagag
ttcctcggggataatgaccgtttcaataaggaggtgatgtacgcctacgtggatcaaatg
gacttccagggcaaagacttcgtttctgctctaaggatgttcttggagggctttcggctc
cctggagaggcccagaagatcgaccggctcatggagaaatttgcagcaagatatctggag
tgcaatcaggggcaaaccctctttgccagtgctgacaccgcatacgtccttgcgtactca
atcattatgttgacaacagaccttcacagtccacaggtgaagaataaaatgacaaaagag
caatacatcaagatgaaccgcggcatcaacgacagcaaagacctacctgaggaatacctc
tcagccatctatgacgagatcgcggggaaaaagattgccatgaaggagacgaaagagctc
accatgaaatccaacaagcagagtgtggcgagtgagaagcagaggcgtctgctgtacaac
gtggagatggagcagatggccaagacggccaaagctctgatggaggccgtcagccacgtc
caggctcccttcaccagcgccacacacctggagcacgtcaggcccatgttcaagctggcc
tggacacccttcctggctgctttcagcgtgggtcttcaggactgcgacgacaccgaggtg
gcctctctgtgtcttgaaggcatccgctgtgccatcaggatagcttgcatcttctccata
cagttggagagggatgcatacgtccaggccctggcgaggttcaccctgctgacagccagc
tccggcatctcagaaatgaagcagaaaaacatcgacactatcaagaccctcatcactgtg
gctcacactgatggcaactacctgggcaactcctggcatgagatcatgaagtgcatcagt
cagttggagctggctcagctgatcggtacgggggtgaaggcacgctacatctcagggacg
gtgcggggcaaagaaggctttgttgcaagtaccaaggagcagagcaacgatgagtacctg
ggtctagtcggagggacggtggaccgtaagcagattgccagcattcaggaatccattggc
gagaccagctctcagagtgtggtggtagctgtcgacaggatattcacgggttctaccaga
ctggatggcaatgcaatagttgattttgtgcgctggctgtgtgctgtgtccatggatgag
ctggcctcgcccacacacccacgtatgttcagcctgcaaaaaatagtcgagatctcctac
tacaacatgggccgcatcaggctgcagtggtccaggatctgggaggttatcggagaccac
ttcaacaaggttggctgtaattccaatgaagatgtggcaattttcgcagtggactctctc
aggcaactgtccatgaaatttttagagaagggggagctggctaacttccgattccagaaa
gacttcctgaggcctttcgagcacatcatgaaaaagaacaggtctcccaccatcagagac
atggtggtgcgctgtatagcccagatggtaaactcccaggcggcaaacatccgctcaggc
tggaagaatatcttctctgtcttccacctggctgcctcggaccaggacgagagcattgta
gagctggccttccagacgactggccacatcgtcacgaatgtatttgaaaagcactttgcc
gccaccatcgactccttccaggatgccgttaagtgtctgtcagagtttgcctgtaatgcc
tccttccccgacaccagcatggaagccatccgcctcatccgacactgcgccaaatacgtc
tcagagaggccacaggccttcaaagactacaccagtgatgacatgaatgtagcgcctgag
gaccgcgtgtgggtgcggggatggttccccattctcttcgagctgtcctgcatcatcaac
aggtgtaagctggatgtcaggaccagggggttaacggtgatgtttgaagtaatgaagacg
tacgggcacacctttgaaaaacactggtggcaagacctgttcagaattgtcttcaggatc
tttgacaacatgaagctgcctgagcaacagactgagaaagcagagtggatgaccaccacc
tgcaaccatgcactttacgccatctgcgatgtcttcacccaatacttcgagtccctcaat
gacgtcctgctggatgatatcctggctcagctctactggtgtgtgcagcaagataatgag
cagcttgcccggtcaggcaccaactgtctagagaatgtggtcatcctgaacggagagaag
ttttccccagagacctgggacaagacgtgtaactgcatgctggacatcttcaagaccacc
atcccacacgcgctgttaacatggagaccagcgggagcagagggagaacacttgacaaca
cagagcctgtcagacaaacagttggactccatttcccagaagtcattggacatccagtcc
cgctctgacgaccagcattccatcagcagtgctgacagggttgccatggagaaccgtcgg
cagagtcagtacagcgcagcctcaggcatgtgtgaggacggctccaggggcaggacccca
acaaaggtccaggagcagcgcttattctcagccttgctgataaaatgcgtcgtgcagctg
gagctcatccagactatcgacaacatcgtgttttttcccgccaccagtaagaaggaggat
gctgagaactttgctgccgctcagcgggacgctgtatatgcagcagacgtcccagtggag
acccagaaccaggggatgtatcgctacctgacctctgagcagctcttcaagctgctggac
tgcctgctggagtcccaccgcttcgccaaagcttttaactccaacaacgagcagaggacc
ttgctgtggaaagcaggtttcaaaggaaagtcaaagcccaacctgttgaagcaggagacc
agcagcctggcctgtggcctgcgcatcctgtttcgtatgtacacagatgagagccgccaa
gacgcatgggcggaggtccagagacgactgctcaatgtgtgcagtgaggctgtagcatac
ttcttggccttgacctcagagagccacagagaggcctggaccaacctgctgctgctcttc
ctcaccaaggtgctaaagatcagcgatgaaaggttcaaagctcatgcatccagatactac
cctctgctgtgcgagatcatgcagttcgacctgatccctgagctccgggctgttctaaga
aagttttacctgcggattggcctggtgtttaacattgcacagctacccgagcctcagccg
acacatgcagagcaggagacagatacggaggtgggagaggaggctggggaggaggcccag
tga
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