Seriola dumerili (greater amberjack): 111221030
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Entry
111221030 CDS
T05606
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111221030 (rnf6)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111221030 (rnf6)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111221030 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111221030
NCBI-ProteinID:
XP_022600075
UniProt:
A0A3B4USB3
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MDPPGGGDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELQQRLD
GAKERVSSQPRTEQRLQTADSGEQQSSSGEGEERGAGGRRGAGGTEPGPETSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHNDTADTAE
LPVTAPSTTSPSIRTASSFSNPRPSAMSRPAPYPSPRPVLSRRMQTRRTRSSTTTLSMSP
PALPAPVSPPAAAQRRGATLHSLAPPPTVPNPPIDQTTPSQHQALSAEIEQGHDDMSAPI
DCPRVSPQSGAQAPAVGHESRGSRTRSRGRARRAAAGGGISSRLSRRSRSPLHRISAVST
TPSSSSGVSGSSIHTVEPGSGTSSVSMETGEAVAEPAALTEPAVETGERESESHVIGAGS
SSVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRS
ERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEADSETVA
PSHTDAIGTNSNTSPASRLHTNESAVGQVGIGGVDQERVGLVGSEDDQGGQARLGGGVVS
TTEGRATSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQAS
LEGEMGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPILAVHHD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggagacgaacggcggaggcaggcagagcgtcttcgacgggag
gaggcatactatcacttcatcaatgaattgagtgaagaggagtacagactaatgagagac
agcaacctgctgggcacacctggggaggtgactgctgaggagctgcagcagcgtcttgat
ggagcaaaggaacgcgtttcatctcagccccgtactgagcagcgcttgcagactgctgat
tctggagaacagcagagcagtagcggtgagggagaagagagaggggctggagggagacga
ggggcagggggcacagagcctggaccagaaacttctaatggtgactcattactggagtgg
ctgaacactttcagacgtactggtaatgctacccgcagtgggcagagtggcaaccagaca
tggcgtgccgtcagtcggaccaaccctaacagtggagaattccgctttagtctagagatc
aacatcaaccatgatcagccagagccgggggagcataatgacactgcggacactgcagag
ctgccagttactgcccctagtacaacttcaccctctatacgcactgcttcctccttctcc
aaccctcgcccttcagccatgtcaaggccagctccgtacccctccccgcgccccgtcctc
agtaggaggatgcagacacggcgtacacgcagcagcactaccactctttctatgagcccc
cctgcacttcctgcaccagtgtcccccccagctgctgctcagaggagaggtgccactttg
cactctttagcaccgcctcccactgttcccaaccctcctattgatcaaactacaccttcg
caacatcaagccctcagtgcagaaatagagcaggggcatgatgatatgtctgctcctata
gactgtccccgtgtatcaccccaatctggggctcaggccccagcagtgggacacgaatca
cgtggcagcaggactcgatcgcgtggtcgtgcacgcagggctgcagcagggggagggatt
tcatcccggttgtctaggcgaagccgttcccctttgcatagaatatctgctgttagtacc
actccatcatccagcagtggtgtcagtggctctagcatccacactgttgagccaggcagt
ggcacaagctctgtttccatggagacaggggaggctgtggcagaacctgcagctcttaca
gagccagctgtagagactggagaacgcgagagtgaatcacatgtaataggagcaggaagt
tcatcggtgcgacggcacccaactatcatgttggacctgcaggtgagaaggattcgacct
ggtgaaaaccgtgatcgggacagcatcgccagcagaacacgatcgcgtgcacgggttgct
gagaatactgtcacatttgaaagtgatagtggtggatttagacgcaccatctcccgctct
gagcgagctgggatccgcacctatgtgagcactatccggattccattgaggcgcatcagt
gagacaggcctgggggaacccaactccactgcgctgcgttctatattgcgacagattatg
actggatttggggagctgagctccctaatggagacagaggctgattctgaaactgttgca
cctagccatacagatgctattggcacaaatagtaacactagcccagccagtcgtctgcat
acaaatgagagtgcagttggccaggttggcataggtggggtagatcaggagagggtaggg
ctggtgggaagtgaggatgaccagggtgggcaggccagactcggaggaggggtagtgagc
accacagagggacgggccaccagcagagacaccaacaacctggtagaaaatggaactcta
cccattctgcggctggcacatttctttttgctcaacgatgaagaggatgacgaacaccct
aggggcctgaccaaagagcagattgacaatctatccacacgcacgtatggtcaggccagc
ctggagggggagatgggtcgtgcatgcagtgtctgcatcaatgagtacgcccagggcaac
aagctgcggcgtctgccctgctctcatgaattccacatccactgcattgaccgctggctc
tctgaaaacaacacctgccccatctgcaggcagcccatactagcagtgcatcatgactga
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integrated database retrieval system
