Seriola dumerili (greater amberjack): 111221156
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Entry
111221156 CDS
T05606
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111221156
04020 Calcium signaling pathway
111221156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111221156
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111221156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
111221156
NCBI-ProteinID:
XP_022600225
LinkDB
All DBs
Position
Unknown
AA seq
2396 aa
AA seq
DB search
MARFAEDLPTRYGGGAGGGGRGAPGAGRGGARGGGGAPGGQRMYKQSMAQRARTMAIYNP
NPVKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPAG
DKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILAT
VGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIG
VEFYMGKFHNTCFKIDTGERVANWPCGQEPPARTCPNGTQCREYWTGPNFGITNFDNILF
AVLTVFQCITMEGWVDILYSTNDVAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKE
RERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAWYKRKQ
NLPVLKRGKAKKGKNDLIGAEEGEDPFADISSVAPPGSPFGRASVKSGSKMDSSSYFRRK
EKRIRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTRALYAAEFVFLGLFLT
EMTLKMYGLGVRNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGASFGISVLRALRLLRIFK
VTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFKDETPTTNFD
TFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAI
AVDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISIAAFVKQNRDALSR
RSSINSIQSPKEQQRSAKAMSVWEQRTNQLRRHNMRASSEALFNELDPEERLRVSSALHL
HPDMKTHLDRPLVVEARNGDKPSRPPEGGREEAGDPRQDGVGDNLHTHSRKHHRHRDRNG
ESRDGGDGRGGRHHIHHSRSRDHNTDGAQTKERRGERSQSRDGGQGHRHHHQAGSPEEET
TDTQGLGLGEERGHRHHHSHRPPKEGNGMIANGAQGECKGRGGGGDSNGERKARCSRMVR
AQSTLDGDDYKRSKNGSRDAEDNGLASTPLQPMRSSLSLGEKQEDADNQKNSTRASQAGL
NSNAIHIPVTITAPPGETTIIPMNNIDCDTFRLSEEKKDLEEEEAANGPRQILPYSSMFI
FGQTNPVRRLCHYVVNLRYFEMCILMVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTG
VFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSLMGSQQSVARGTKG
KDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAV
QLFKGKFFYCTDESKDLEKDCRGQFLDYDRDDITAQPREWKKYDFHYDNVLWAFLTLFTV
STGEGWPLVLKHSVDATYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQE
QGDKAMSECSLEKNERACIDFAINAKPLTRYMPENKQSFQYKMWKFVVSPPFEYAIMTLI
ALNTVVLMMKFYGAPDLYESMLKYLNIVFTALFTLECVLKIIAFGPLNYLKAAWNVFDFV
TVLGSITDILVTEIKTDKMINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYV
CLLIAMLFFIYAIIGMQVFGNIELNEDTAINHHNNFQTFFQALTLLFRSATGEAWHEIML
SCLSNQLCDKLSGTLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASI
LGPHHLDEFIRVWAEYDPAACGRMSYRDMYKMLRDMSPPLGLGKKCPPRIAYKRLVKMNM
PIADDNTVHFTSTLMALIRTALEIKLASGVLAQRLCDADLKREISRVWPNLSQKTVDLLV
TPHKYNELTVGKVYAAFMIFDYYKQNRAKRLQQQHPSGGTQSKLGALFRPVLPLTHIQEV
EPPICSPKQPLPSVPEPEAKPQAPPTTTATTSINRDTILNQRSAIKHSQSGDVSQAAQRP
KGRRKLQRGQSEDVPYSTRPQEVVELKQVENISDTEEYPSLEGHYRAASLPRLNAEYYRS
HPRHAPGTHLAPIVDLSPIRRSASSLTPQRHQEVGLREYDLERPGLAQSSTGPGQVQGQD
RAHHHHHHHRCHRRRDKDKDKKQKSLDRAASVQPSSSFTDPSAEGLSRERARERDRSRPH
ERRHHSSAGEKQRYYSCERYGSREQCHAKSAGPSRSTSPGEGQDAGLLKQVYGVVKTGPV
TLPSDSSTPGRGRRQLPQTPLTPRPAVAYKTANSSPLPSSASTGTTGHQTRFSRGLSEHD
RLLGGHSESPIPVTRISSDPNLNRQLQDASQQALLEETEDFQDAVSSHGGGHSARTTAST
TASASHGNAAAPVTVPVTQARAGVVPNGYHFTLGVNSVLGPGGRGSLRERDEEDWC
NT seq
7191 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagaagatctacccacccgctatggaggaggcgcaggcggcggaggg
agaggtgcgccgggcgctgggagagggggagcccggggtggtggcggcgctccgggtggc
cagaggatgtacaagcagtcgatggcccagagagcccggacaatggccatttacaacccg
aaccctgtcaaacaaaactgcttcactgtcaaccgctccctcttcatcttccgcgaggac
aatctcatcaggaagtatgcaaagcgaataacagagtggcctccatttgagtacatgatc
ctggctacaatcatcgccaactgcatcgtcctggccctggagcagcatctacctgccggt
gacaagacacctatgtcagagcgcctggatgacacagagccctactttattggaatattc
tgtttcgaggctgccattaagatcatcgccctgggctttgcgtttcacaaaggctcctac
ctccgcaacggctggaatgtaatggactttgtggtcgtcctcactggaatcttggccacg
gtgggttcagactttgacctgagaacactgcgagcggtgagagtgctgagacccctgaaa
ctcgtatcaggaatcccaagtctccaggtggtgttgaagtctataatgaaagccatggtt
cctctgcttcagatcggcctgctgctcttcttcgccattgtcatgtttgccatcatcggg
gtggagttttacatgggcaaattccacaacacctgcttcaagatcgacactggtgagaga
gtagccaactggccttgtggtcaggagcccccagccaggacgtgtcccaatgggacccag
tgtagagagtattggactggacccaactttggtatcaccaacttcgacaacatcctgttt
gcagtgctgactgtgttccagtgcatcactatggagggctgggtggacatcctctacagc
accaatgatgtggcaggaaacacctggaactggctctacttcatccctctcatcatcatc
gggtccttcttcatgctcaacctggttcttggtgtcctctcaggagaatttgccaaagaa
agagagcgtgtggagaaaaggcaggagttcctgaagcttcggaggcagcagcagatagag
agagagctcaccggatacttggagtggatctgcaaagcagaggaggtgttgctggaggag
gaggacgagattgcagaggagaagtccccgctggacggtgcgtggtacaagaggaaacaa
aaccttccagtcctgaaacgaggcaaagccaagaaaggtaaaaacgacctgatcggtgct
gaggagggcgaggacccttttgctgacatctcctctgttgctccgcctggctctccgttt
ggtcgggccagcgtgaaaagcggcagcaagatggacagctcgtcttacttccgtcgtaag
gagaagaggatccgcttcttcatccgccgcatggtgaaggctcagagcttctactggatc
gtcctgtgtctggtgggactcaacactctgtgtgtggccatagttcactatgaccaacct
gagtggcttacaagggccctctacgcagcagagttcgtgttcctgggtttgttcctgact
gagatgaccttgaagatgtacggcctcggagtgcggaactatttccattcctcctttaac
tgcttcgattttggggtgattgtgggaagtatttttgaggtcatctgggacatgattaaa
ccaggagcatcatttggtatcagtgtgctgagagccctgcgactgctcaggatattcaaa
gtcaccaaatactggaactcgttgaggaacctcgtggtttccctcctcaattccatgaag
tccatcatcagcttgctcttcctcctctttctcttcatcgtggtctttgccctgctcggc
atgcagctctttggaggacagtttaactttaaagatgagacaccaacaacaaactttgat
acgttcccagcggccatcctcacagtgttccagattctgactggcgaagactggaacgcc
gtgatgtaccacgggatcgagtctcaaggaggcgttcgccgcggcatgttctcttcagtc
tatttcatcgtcctcacactctttggaaactacaccctcctgaatgtcttcttggccatt
gctgtcgataatctcgccaacgcacaggagctgactaaggatgaggaggagcaggaggag
gcagccaataagaagctcgcactgcagaaggctttggaggtgaaggaagtcagcccgatg
tcggcagccaacatctcgatcgctgcttttgtaaagcaaaatcgagatgcactctctcgc
aggtcgtccatcaacagcattcagtcacctaaggagcagcagcgctcagcaaaggccatg
tcagtgtgggagcaaaggaccaaccagctgaggagacacaacatgagggcgagcagcgag
gccctgttcaacgagctcgacccagaggagcgcctccgcgtgtcctccgctctccacctg
catcccgacatgaagactcacctggaccggccgctcgtggtggaggccaggaacggcgac
aaacccagcaggcctcctgaaggaggacgggaggaggcaggggatccccgacaggatggg
gtcggagacaacctccacacgcactccaggaagcatcaccgccaccgcgacagaaacggg
gagagcagagacggaggcgacggcagaggtggaaggcaccacatccatcacagcaggagc
agagatcacaacaccgacggtgcccagacgaaagagaggaggggggagaggagccaaagc
cgcgacggagggcagggtcacaggcaccaccaccaggctggctcgcctgaagaggagacc
actgacacgcaaggattagggttaggagaagagaggggacaccgccatcaccactcccat
cgtccaccaaaagagggaaacgggatgatagcgaacggtgcacagggagagtgcaagggg
agggggggaggaggggatagtaatggagagaggaaggcacgctgctctcgcatggtcaga
gctcagtcgactctggacggagacgactataagaggagcaagaatggaagcagagatgct
gaggacaacggcctcgcctccactcctctgcagccaatgcgcagtagcctgagtcttgga
gaaaagcaagaggatgctgacaaccagaagaactccaccagggccagccaggctggcctc
aacagcaacgccatccacatccccgtcaccatcactgcccctccaggagagaccaccatc
atacccatgaacaacatcgactgtgacactttccgactcagtgaggagaagaaagatctg
gaggaagaggaggcagctaatgggcctcggcagatcctcccctacagctccatgttcatc
ttcgggcaaacaaatccggtgcggcggctgtgtcactacgtggtcaacctacgctacttt
gaaatgtgcatcctgatggtcattaccatgagcagcatcgccctggcagccgaggacccc
gtgcaagccaacgcaccgcgcaacaacgttctgaagtatctggattacgtctttactgga
gtctttacttttgagatggtgattaagatgattgacttgggactgctcctgcaccctggc
tcttacttccgcgacctgtggaacattctggacttcatcgtggtcagtggagctctggtg
gcctttgcctgctcgagccttatgggatcgcaacaaagcgtggccagagggacgaaaggc
aaggacatcaacaccatcaagtccctcagggtcctccgagtcctgcggccactcaagacc
attaaacggctgcccaagctgaaggccgtgtttgactgtgttgtaaactctctgaagaac
gtcctcaacatcctcatcgtctacatcctcttcatgttcatcttcgctgttatcgccgtg
cagctgtttaagggcaaattcttctactgcaccgacgagtccaaggatctggagaaagac
tgcaggggtcagtttctggactacgacagggatgacataacagctcagcccagagagtgg
aagaagtacgacttccactacgataacgttctctgggccttcctgacgctctttaccgtc
tccaccggggagggctggccattggtcctgaagcactctgtggatgctacctacgaggat
cagggccccagcccgggcttccgcatggagacatccatcttctatgtggtctacttcgtg
gtgttccccttcttcttcgtcaacatatttgtggctttgatcatcataacctttcaggag
cagggagacaaggccatgtcggagtgtagcctggagaagaacgagagagcttgtatcgac
tttgccatcaacgccaaaccgctgacgagatacatgccagagaacaaacagtccttccag
tacaagatgtggaaatttgtggtgtcgcctccgttcgagtacgccatcatgactttaatc
gccctcaacactgtcgtgctgatgatgaagttctacggagctccagacctctacgagtcc
atgctgaaatacttaaacatcgtcttcacagccctcttcacactggagtgcgtcctcaag
attattgccttcggtccactgaactacctgaaagcagcgtggaacgtgtttgactttgtg
actgtgcttggaagcatcaccgacatcttggtcacagagattaagacggacaagatgatc
aacctgagttttctgaggctgttcagagctgctcgtctcatcaagctgctgcggcagggc
tacaccatccgcatcctgctgtggaccttcgttcagtccttcaaggctctgccgtatgtc
tgcctgctcatcgctatgctgttcttcatctatgccatcattggaatgcaggtgtttgga
aacatcgagctgaatgaggacaccgccataaatcaccacaacaacttccagacctttttc
caggccttgacgcttctcttcaggagtgcgacaggcgaggcgtggcatgagatcatgtta
tcgtgtctcagtaaccaactgtgtgacaagctctcaggaactctagggaaggagtgtgga
agtgactttgcctacttctactttgtctccttcatcttcctctgttccttcctgatgctg
aacctctttgtcgctgtcatcatggacaactttgaatacctgaccagggacgcctccatt
ttggggcctcatcaccttgatgaattcatccgtgtgtgggcggagtacgaccccgctgcc
tgcggccgcatgagttaccgcgatatgtacaagatgcttcgcgacatgtcccctccacta
ggtttgggaaagaaatgtccaccccgaatcgcctataagcgattggtgaagatgaacatg
cccattgcagatgacaacacagtgcatttcacctccacgctgatggccctgatccgcaca
gccctggagatcaaactggcatctggggtcctggcgcagcgtttgtgcgacgccgacttg
aagagggagataagccgagtctggcccaacctgtcgcagaagactgttgacctgctggtg
acgccacataaatacaatgagctgaccgtggggaaggtctacgcagcgttcatgatcttt
gattactataagcagaatcgtgccaagagactccagcagcagcatccttcaggaggaact
cagagtaaactgggggcgttgttccgtcctgtgctgcccctcactcacatacaggaagta
gaaccaccaatctgcagccccaaacagcccctcccatccgtccctgaaccagaagctaag
ccacaggccccgcccaccaccactgccaccacctcaataaacagggacacaatcttaaac
cagaggagtgccataaaacattcccagtccggagatgtttctcaggcagcacagaggccc
aaaggccggaggaaactacagaggggccagtcagaagatgtgccatattccaccagaccc
caggaagtggttgagctgaaacaggtggagaacatttccgatacagaggaatatcccagc
ctggaaggacactacagagcagcttctctgccccgactcaatgctgaatactaccggagc
caccctcgccacgcccctgggacccacctggcaccgattgttgacctcagtcctataaga
cgctcagcctcctcgctgacaccgcagcgccaccaggaggtcgggctgagggagtatgac
ctggaacggcctggtctggcccagtcctcaactggaccagggcaagtccagggccaggat
agagcccaccatcatcaccaccaccaccgctgccatcgacgcagggacaaggacaaagac
aagaagcaaaagtccctggatagagctgcatcagtgcaaccgtccagttcgtttaccgac
ccctcagctgaaggtctgtccagagaacgagcgagggagcgggaccgcagccggcctcac
gagaggaggcaccactcctcggcaggagagaagcagcgctactactcctgtgagcgttac
ggcagcagggagcagtgtcacgccaagtcagctggtcccagtagatccacgtctcctgga
gagggacaggacgctggtttgctcaaacaggtttacggtgtggttaaaactggccctgta
acactcccctctgattcgagcacgccgggccgtggtcgcaggcagctgccacagacgccc
ctcacccctcgtcccgccgtggcctacaagaccgccaactcctcgcctctcccgtccagt
gccagcactggtacgacagggcaccagactcgcttcagccgtggcctttcagagcacgat
cgtttacttgggggccacagcgagtccccgataccggtcacccgcatcagttcggaccct
aatttaaaccgacagctgcaggacgcttctcaacaggccctcctcgaagagacagaggac
ttccaggacgctgtgagcagccacggagggggacactctgccagaaccactgcctcaact
acagcctcagcttcacacggaaatgctgctgcgcccgtcacagtgcccgtcacgcaggcc
cgggcaggggtggtgccgaacgggtaccacttcaccctgggggtcaactctgtgttggga
cctgggggcagagggagtctcagggagagggacgaagaggactggtgctaa
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