Seriola dumerili (greater amberjack): 111221158
Help
Entry
111221158 CDS
T05606
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
sdu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111221158
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111221158
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111221158
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111221158
03036 Chromosome and associated proteins [BR:
sdu03036
]
111221158
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111221158
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111221158
SWI/SNF complex
111221158
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111221158
PBAF complex
111221158
SWI/SNF complex
111221158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
111221158
NCBI-ProteinID:
XP_022600227
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggctctaagtaaaacgtttggtcagaagccagtgaaatttcagttagaacaa
gatggggacttttacatggttggctcggaggttggaaactatctgcgaatgttcagaggc
tctctgtataaaagatacccgtctctatggaggaggctcgcttcagtggaggagaggaag
aaaattgtagcatcatcacacgccaccagtgtcactctgctgaaggcatcagagtgtgaa
gagatctttgagggtaacgatgagaaatacaaggcggtgtccatcagcacggagccccca
gcgtacctcagggagcagaaagcaaagaggagcagtcagtgggtccccacgctgcccaac
agctcccaccaccttgatgctgtgccttgctccaccaccatcaaccgcaacaggatgggc
cgtgacaagaagaggaccttccccctgtgcttcgatgaccacgaccctgcagtgatccat
gagaacgcagcccaggtggaggctctggttcccattcgtctggacatggagatcgacgga
cagaagctgagagacgccttcacgtggaacatgaacgagaaactgatgaccccggagatg
tttgcagagattctgtgtgacgacctggacctgaatcctctggcctttgtccccgccatc
gcctcagccatccgtcagcagattgagtcctaccccactgacagcatcctggaggagcag
gccgaccagagagtcatcatcaagctgaacatccacgtggggaacatctctctggtggac
cagtttgagtgggacatgtcagagagggagaactcccccgagtcgttcgccttgaagctg
tgctcggagctgggtctgggcggagagtttgtcaccaccattgcctacagtatccgtggt
cagctcagctggcaccagaggacgtacgccttcagtgagaacccactccccacggtagag
atcgctatccgcaatacaggagatgcagaccagtggtgccccctgctcgagaccctcaca
gatgctgaaatggagaagaagattcgagaccaggacagaaacacaaggcgtatgaggaga
ctggccaacactgctccgtcctggtaa
DBGET
integrated database retrieval system
