Seriola dumerili (greater amberjack): 111221324
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Entry
111221324 CDS
T05606
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111221324 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111221324 (nup98)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111221324 (nup98)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111221324 (nup98)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111221324 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
111221324
NCBI-ProteinID:
XP_022600401
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGNASTFGQQNTGFGTTGGFGTSAFGTTSNTGGLFGSTQNKPGG
LFGSSTFSQPPTSSTSTGFGFGAASGTSTSLFGNTGTGTSGGLFSQQNNAFGANKPTSFG
SFGTSTSSGGGLFGSTNTASNPFGGTNSLFGGSGFSATQQPGTTVKFNPPTGSDTMVKAG
VTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNQMAAGTGSLFGSATATSSAA
TGLFGSTAPNTSFSFGQNKSTFGAPATGGFGATTGGLFGQPTQQQAGSLFKPFGQTTTTQ
NTGFSFGNTNTMGQANTSTMGLFGNTAASQSGGLFGAAQTSTATGFGTGTGLFGQPNTGF
GNVGTQQSLFGNKTAGFGTTTTSAPSFGTGTGLFGNKPALTLGTGTNTSTFGFGANPAAG
SLFGNKPATGGLGTGLGTSFGTAVGTGQPSLFGNNQNKLGTTLGTMGTFGATGFNSGTST
LGFGAPQQPVALTDPSAAAAQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPT
NPTAQKALTTPTHYKLTPRPATRVRPKALTSSGSSKSQLFDGLDDDEPSLTSGAFIPRKS
IKKLVLKNLNSSQYSSQTEAEPDDLASPSEYPQNGHSLMEEEEELRELAGPSSRADEDPE
VTQFYVNPIAKPIPQGRTQTSLQDTISDLNMHKPARNGLELSSDDVSASLGEESLQEERE
EEQQEAQQSPHPAGIVLNRVGYYTIPSMEDLAEMVDENGECVVENFTVGRKGYGSIFFPG
EVNVTGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTSCTQIRS
PERLTDMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEDVPPKAD
PKKLKTMMSLPPPRMQQQLPPSQQQVAPQAQSTIAVDLPSGVAELDSDMADITQSFPAES
MLGGEEDGDLLGAEMDTTGGKHGGLMSADHDGISVSNHIASTLGINPHTLQIMKASLFAE
DEEESDMFQDQGAMKVSTDVSSPRLILPGAQTRPSVGGLLQARFTSGLLPQLSDSPRPSF
PPPLSRASPALVESPRSLHWAGSGPSSFLLPPRTQEPSVRTVGVRRLGGPVPIKESVTLG
KGGLLMDAGLFVGRSFRVGWGPGWTLAHCGQRLSSLPSKQLDHQELSKTDFSFLPKSARN
KPLKESPYKVVLEQLVGLEPPAVKTIEEEEDEESQAVLQRPLEICLEHSTISTTDASACP
LVQPQLGVAALHKYAKWITELNDKQGDADLLLGYWAEVWTLCEALWGRLGPADQEPDIET
PSDYEQQLERRRTFSAWLSRGATCRVEDEVALAGKGRHTEAIFSYLTGNRISEACRLAQK
EGDHRLSLLLSQAMGSQYCRDLLALQLADWNRMQTDCYLPEERLRIFTLLAGKPVWQSSD
SVVNVCSQLDWKRCVAVHLWFMLPPTASVADALDRYEAAFQGSCEGGKYACAPMPPYLEA
EQPDMDEEEEEESKRPLYDLCFHLLKLYSDRHYSLQQLLDPLTITWERLDYRLSWHLWGV
LQALHYSHLSTSRQGLLHASYAAQLESAGLWHMAVFILLHIPDHIQRERAVREMLTLHCP
LQETDESVRRERFLTERLLIPEQWIHEAKATRARRDADRHQEALHLYRAGYWSQCHRLLI
QHLASECIINDNHDYLLEFLEGLAVPEHSTTIQDWDTAGRVYLDYIRVIKTLQDIQQMEN
AGYELERLYSDVTSLCSRIELLPCSTARDRLAQSEMAKRVANILRVVLSLQQGDAASDSL
SIPLAQLAPHITRLPMPEDYTLEELRGLTQSYLRQLIVSQ
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttggtactccctttggtggagggacggggggatttggcaacgca
tcgacctttggacagcaaaatacgggctttgggacgacggggggctttgggacatctgca
tttgggacgaccagcaacactggaggactgtttggctccacacagaataaacctggcggt
ctgttcgggtccagtacgttcagccagccgccgacttcctccaccagcaccggctttggt
tttggtgcagcgagtggcacctccaccagcttgtttggcaacactggaacaggcaccagc
ggcgggctcttctcccagcagaacaatgctttcggtgccaacaaacccacatcttttgga
agcttcgggacgagcaccagcagtggcggcggcttgtttggttccaccaacactgcctcc
aaccccttcggtggaacaaactccctgtttggaggctcagggttctctgccacacagcag
ccaggaacaaccgtaaaattcaaccctcccacaggaagtgacacaatggtgaaagctggt
gtgaccactagcatcaacaccaagcaccagtgcatcacagccatgaaggagtatgagaac
aaatctctggaggagctgaggttggaggactaccaagccggcaggaagggcccgaccaac
cagatggctgcagggacaggcagtctgtttggttcagccacagccacatccagtgccgcc
accggtctgtttggctccacagcccccaacaccagcttctccttcggacagaacaagagc
actttcggagctccagcgactggcggttttggtgctaccacaggtggtcttttcggccag
ccgacccagcaacaagccggcagcctcttcaagccgttcggtcaaaccaccaccacacag
aacactggcttctcctttgggaacaccaacactatgggacaggccaacaccagcaccatg
ggtttgtttgggaacacagcagcttctcagtcgggcgggttatttggcgccgcccagacc
agcaccgccactgggtttggaacgggcactgggctgtttgggcaacccaacactggattt
ggaaatgttggaacacagcagagtttattcggaaataagacggcggggttcggcaccacc
accaccagcgccccgtccttcggcaccggcaccgggctctttggcaacaagcctgccctc
acactgggaactggaaccaacacctccaccttcggttttggtgcgaaccccgctgcaggg
agtctgttcgggaacaagccggccactggaggtctggggaccggactgggaaccagcttt
ggaacagcagtgggcacaggccagccgtctctgtttggcaataaccagaacaaactgggc
accacactgggaacgatgggaacattcggagcgactggattcaacagtggaaccagcacc
ctgggctttggagctccacaacaacccgtcgcactcactgatccgagcgcagcggccgcc
cagcaggccatgcttcagcagcagctcagtgttctggcgtattcaccgtacggtgactca
ccactgttcagaaacccgctgtcagaccccaagaagaaagaggagcgtctgaaaccaacc
aatccgacggcacagaaggctctgaccacgcccacccactacaagctgacccctcgacct
gcaaccagggtccgccccaaagcgctgacatcatctggctcgtccaagtcgcagctcttt
gatggcctggatgatgacgagccctcgctcaccagtggagccttcatacccaggaagagc
ataaagaaacttgtgctgaagaacctgaacagcagtcagtacagcagtcagacggaggcg
gagccagatgaccttgcttcaccctcagagtatccacagaacggacacagccttatggag
gaggaggaggagctcagggagctggcaggccctagcagccgggcggacgaagaccccgag
gtcacccagttctacgtcaatcccatcgccaagcccatcccgcagggccgcacccagacc
agcctgcaagacaccatcagtgacctcaacatgcacaaaccagccaggaacggcctggag
ctgagcagcgatgacgtgtcggcatctctgggggaggagtctctgcaggaggagagagag
gaggagcagcaggaggctcaacagtctcctcacccagcgggtatcgtcctgaaccgtgtt
ggttattacaccatcccctctatggaggatctggctgagatggtggatgaaaacggagag
tgtgtggtggaaaacttcaccgtcggcaggaaaggctacggctccatcttcttccccggc
gaggtgaatgtgacggggttgaacctcgacgagattgtccacttcagacgcaaggaggtc
atcgtgtaccccgatgacaaaaacaagccgccagagggggaggggcttaacagacgggcc
gaggtgaccttggatggcgtttggccaaatgacaaaacatcctgcactcagatcaggagc
cccgagcgtctgaccgacatgaactacgagggtcggctggagaaagcctctcgtaaacag
ggagcccgtttcctggagtacagacccgagacgggatcctgggtgttcgaggtggcccat
ttctccaaatatggcctccaggactctgacgaggaggaggacgtcccgcctaaagccgac
cccaagaagctgaagacgatgatgtcacttcctccacccaggatgcagcagcaacttccc
ccctcccagcagcaggtggcgccacaggctcagtccaccatcgccgtggatcttcccagc
ggcgtggcggagctggacagcgacatggccgacattacccagagcttcccggcagagagc
atgctgggaggagaggaggacggtgacctgctgggggcggagatggacacgacgggtggg
aagcacggaggtctgatgtctgcagaccacgacggcatctctgtgtccaaccacatagcg
tcaacactggggatcaacccgcacaccctccagatcatgaaggcgtctctgtttgctgag
gatgaagaggaaagcgacatgttccaggatcagggagcgatgaaggtctccactgacgtc
tcgtctcctcgcctcatcctgccgggagctcagactcgaccgtccgtgggtggtctcctt
caggctcgtttcacctctggcctcctccctcagctctcagactctccccgcccttccttc
cctcctcccctgtcacgagcgtctccagcgttggtcgaatccccccggtcattacactgg
gcgggatcaggcccctcctccttcctgctgccccctcggactcaggagccttcggtcagg
acggttggcgtccgacggttgggcggccccgtcccaatcaaagagtcggtcactctgggg
aagggaggtttgttgatggacgccgggctgtttgtgggtcggtcctttcgggtcgggtgg
ggtcccggctggacgctggcgcactgcggccagcggctgagttcactcccctccaaacag
ctggatcaccaagaactgagcaagacggacttcagcttcctgccgaaatctgccaggaac
aaaccgctgaaagaaagcccctataaggtggtgttggagcagctggtgggtctggagcct
ccagccgtgaagacgattgaggaagaggaggatgaagagagccaggcggtgctgcagcgc
cccctggagatctgcctggagcacagcaccatcagcaccacggatgcctcggcctgcccg
ctggtccagccgcagcttggcgtggcggcgctgcacaaatacgccaagtggatcaccgag
ctgaacgacaagcagggcgacgcagacctcctcctggggtactgggctgaggtctggacc
ctgtgtgaggccctgtggggtcggttgggccccgcagaccaggagccagacatcgagact
cccagcgactatgagcagcagctggagaggcggcggaccttctcggcctggctgtcgcgc
ggcgccacctgcagggtggaggacgaggtggctctggcggggaagggtcgccacacagag
gcgatcttcagctacctgacaggaaaccgcatcagtgaggcgtgtcgactcgcacagaag
gaaggagaccaccgtctgtccctgctgctgtctcaggccatgggctctcagtactgccgg
gacctgctggccctgcagctcgccgactggaaccgcatgcagaccgactgctacctgccg
gaggaacgactgcgcatcttcacgctgctcgccgggaaacctgtgtggcagtcgtccgac
tctgtggtgaacgtgtgctctcagttggactggaaacgctgcgtggccgttcacctctgg
ttcatgttgcctccgaccgcctccgtggccgacgccctcgacagatacgaagccgctttc
cagggctcatgtgagggggggaagtacgcctgtgcccccatgcctccgtacctggaggcg
gagcagccggacatggacgaggaggaggaggaagagtctaaacggccgctgtacgacctg
tgcttccacctgctcaaactctacagtgacagacactacagcttgcagcagctgttggac
cctctgacgatcacctgggagcgtctggactaccgtctgagctggcacctgtggggcgtc
ctgcaggcgctgcactacagccacctgagcacctcgcggcagggactcctccacgccagc
tacgccgcacagctggagagcgccggcctctggcacatggccgtcttcatcctactgcac
atccccgaccacattcagcgggagcgagcagtgagggagatgttgaccctccactgcccc
ctgcaggagacggacgagtccgtccggagggagcgcttcctgaccgagaggctgctgatc
ccggagcagtggatccacgaggccaaggccacccgagcccgacgagacgccgacagacac
caggaggccctgcacctgtaccgggccggatactggagccagtgtcaccggctgctgatc
caacatctggcctcagaatgcatcatcaacgacaatcacgactacctgctggagttcctg
gaggggctggcggtccctgaacacagcaccaccatccaggactgggacactgcagggaga
gtttacctggactacataagagtcataaagactctgcaggacatccagcagatggaaaac
gccggctacgagctggagcgtctctacagcgatgtcacgtctctctgcagcagaatcgaa
cttctgccctgcagcaccgccagagaccgcctcgcccaatcagaaatggcaaagcgcgtg
gccaacatcctgcgcgtggtgctgagcctgcagcagggcgacgccgcgtccgactccctc
agcatcccactcgcccagctggcgccgcacatcacccgcctgccgatgccggaggactac
acgctggaggagctgcgaggcctcacgcagtcgtacctgcgacagctcatcgtcagccag
tga
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