Seriola dumerili (greater amberjack): 111221639
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Entry
111221639 CDS
T05606
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111221639
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111221639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
ATP-synt_B
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
111221639
NCBI-ProteinID:
XP_022600819
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MAAPLLAPPGPDSFKKFTPETLANIEKRIKEEKNKKPPKPRSDSSHRDTSDDNEPKPNSD
LEAGKSLPFIYGDIPDGLAATPLEDLDPFYLNKKTFIVLNKGKTIFRFSATPSLYILSPF
NLLRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLTKIV
ARGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVFWPINMTDQYLPNGSR
GFDWATYIMNDTNFYFLPDQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGW
AFLTLFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATIEEAEQKEAEFKAMLEQLKKQQEETQAAAMATSAGTVSEAALEDEGGGHLSRSSSEV
SKLSSKSAKERRNRKKKWRQKEQEKEKGDSEKVVKSESDDGSKKSTIRFPGSRLGRKTSI
MNQSLLSIPGSPFMSRHNSRSSIFSFKGRSKDMGSENEFADDEHSTVEESEDRRGSLFIP
YRRNSYSGYSQGSSRIHPLAPHSGGKRNSTVDCNGVVSLIGPGPGRRLLPETTDVEIKKK
HSGSLMVSVDQLNSSFKGKDRANSQMSVVTNTLIEELEESQRKCPPCWYKFANVVLIWEC
CPIWLKIKHIVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTESFEEVLSVGNLVFTGI
FAGEMFAKLIAMDPYYYFQEGWNCFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLA
KSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIARDCELP
RWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVMVIGNLVVLNLFLAL
LLSSFSADNLAATDDDGEPNNLQLAVARIKTGIAWFKVNMRVFVATVLKKPIEDEQKPLD
EMYEKKLNCIANHTVDINRELDYAKNGNGTTSGIGSSVGKYMIDEDYMSFIHNPNLTVCV
PIAVGESDFENLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDVEEVAVVEVVEEYLD
PEPCWTDECVAKYKCCDVPITFGWGKHWWFLRKTCYLIVEHNWFETLIIFMILLSSGALA
FEDVYIEQRKTVRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSI
VSLIANALGFSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLI
FWLIFSIMGVNLFAGKYYYCYNSTAEENFLPDKVNNKTECFALINANYTEVRWKNVKINF
DNVGAGYLALLQVATFKGWMDIMYAAIDSRKVEDQPVYEDNLYMYIYFVIFIIFGSFFTL
NLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNNIQGMVF
DFVTQQVFDISIMILICLNMVTMMVETDDQSEDTEVVLYWVNFIFIVIFTGEFLLKLFAL
RHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKG
IRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDMYNFETFGNSMI
ILFMITTSAGWDGLLLPILNYPPDCDPLLENAGTPATGDCGNPSVGIFFFVMYIIISFLI
VVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDASQFITYAKLSDFADALE
HPLRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAA
NPSKVSYEPITTTLRRKQEDVSARIIQRAYRSYLARRGFVCKRKPANNKVENGGNNQEQE
KKESTPSTASLPSYDSVTKPDKEKQDDNNEGKGGRKEKGRNQKDIRESKC
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccccttcttgcacccccaggacctgacagcttcaagaaattcaccccagag
acgctcgctaacatcgagaagcgcatcaaagaagagaagaacaagaagccacccaagccc
agatcggacagtagtcaccgcgacacatctgacgacaatgaacccaagcccaacagtgac
ctggaggctgggaagagcctgcccttcatctacggcgatattcctgatggactggcggcc
acgccgctggaggatttggacccattctatttgaacaagaaaacatttatagtcctaaac
aaagggaaaacaatcttccgcttcagtgccacgccctccttgtacatcttaagccctttt
aatctacttaggcgtatagctattaagattttgatacattcgttattcagcatgatcatc
atgtgtacgattttgaccaactgtatattcatgacatttagtgaccccccagagtggtcc
aaacaagtagagtataccttcacaggtatctatacgtttgagtcactcacaaaaattgtt
gcccgaggcttctgtatagatgggttcacctttctcagagacccatggaactggctcgat
ttcatggtcatctcaatggcatatataacagagtttgtggaccttgggaatgtctcggcg
ctgagaacgttcagggttctccgagcattgaaaactatttctgtcattccaggcctgaag
accattgtgggtgctctgatccagtctgtgaagaagctgtcggatgtgatgatcctcacc
gtcttctgtctcagcgtctttgctctgattggactgcagctcttcatggggaacctgcgg
aataagtgtgtattctggccaatcaacatgaccgatcagtacctgccaaatggcagcagg
ggctttgactgggccacatacatcatgaatgacactaatttctacttcctccctgatcag
cttgatgctctactatgtggaaatagttctgactcaggacgatgtccagagggctataca
tgcatgaaagccggaaggaaccccaactacggttacaccagcttcgatagctttggatgg
gctttcctcaccctctttcgcctcatgacccaagacttctgggaaaatctctacatgctg
actcttcgagccgcagggaagacctacatgatcttctttgtgcttgtcatcttcgtgggc
tccttctacctggtgaatctcatcttggctgtggtggccatggcttatgaggagcagaac
caggccactattgaggaggcagagcagaaagaggctgaatttaaggccatgttggagcag
ctgaagaagcaacaggaggagacgcaggctgctgccatggcgacgtctgcaggcacagtg
tctgaggctgcgttagaggatgaaggaggggggcacttgtcccgcagttcctctgaggtc
tccaagctgagctccaagagcgccaaggagcgtcgcaatcgcaagaagaaatggcgtcag
aaagagcaggagaaagagaagggagacagcgaaaaggttgtcaagtctgagtcagacgat
ggcagcaagaaaagcaccattcgtttccccggaagccgcctggggaggaagacatccatc
atgaaccagtcactactcagcatcccaggctcacccttcatgtcgcgccacaacagccgc
agcagcatcttcagcttcaaaggccgttccaaggacatgggctcagagaacgagtttgca
gacgatgagcacagtacagtagaggagagcgaagaccgtcggggctccctgtttatccct
taccgccgcaacagctacagtggctacagccaaggctcatcacgcatccacccactggca
ccccactctggagggaagaggaacagcacagtggactgcaatggcgtggtgtctctcatc
ggccctgggcccggcagacggcttctgcctgagactacagacgtggagattaagaagaag
cactctggctctcttatggtatctgtggatcagctcaactcctccttcaaaggaaaggac
cgcgccaacagtcagatgagcgtagtcaccaacacactgatagaggagttggaggagtct
cagaggaagtgtcctccatgttggtacaagtttgctaacgtcgtcctcatctgggagtgc
tgtcccatctggctgaagatcaagcacatagtctacttgattgtcatggacccgtttgtt
gacctggccattaccatctgtattgtcctcaacaccctcttcatggccatggagcactac
cccatgactgaaagttttgaggaagttctttctgttggcaacctggttttcacaggcatc
tttgccggggagatgtttgccaagctgattgccatggatccctactactacttccaggaa
ggctggaactgctttgatggcttcatcgtgactctgagtttagttgagctgggactggct
gatgtggaaggtctgtcagtgctcaggtctttccgattgttaagagtgttcaaactggcc
aaatcgtggcccaccctcaacatgctgatcaagatcattggcaactcagtgggagctctg
ggtaatctgaccctggtgctggccatcattgtcttcatctttgctgtggtgggcatgcag
ctgtttggcaaaagctacaaggactgtgtgtgtaagatcgcgcgggactgcgagctaccc
cgctggcacatgaatgacttcttccactccttcctgatcgtgttccgagtgttgtgtggg
gagtggattgagaccatgtgggactgtatggaagtggcgggacagtccatgtgtctcatc
gtcttcatgatggtcatggtcatcggaaacctggtggtgctgaacttgtttctggccttg
ctgctgagctcattcagtgcagacaacctcgctgccacagatgacgatggggagcccaac
aatctccagcttgcggttgcccgcattaagacagggattgcctggttcaaggtcaacatg
cgggtctttgtggccacagtgcttaaaaagcctatagaagatgaacagaagcctttggat
gaaatgtatgagaagaagctcaactgcattgcaaaccacacagtggacatcaaccgtgaa
ctggactatgctaaaaatggcaatggcaccaccagcggcattgggagcagtgtgggaaag
tatatgattgatgaggactacatgtccttcatccacaaccccaacctcactgtctgtgtt
cctattgctgtcggcgagtcggactttgaaaaccttaatacggaagatttcagcagtgaa
tcggatgtggagaacagcaaagatctggatgacaccagttcatctgagggcagcacaata
gacatcaagcctgatgtggaggaggtggcagtggtggaggtagtggaggagtaccttgac
ccagaaccctgctggacagatgaatgtgtggccaaatacaagtgctgtgatgttcccatc
accttcggctggggcaaacactggtggttcctgaggaagacctgctacctgattgtagaa
cacaattggtttgaaaccctcatcatcttcatgatcctgctcagcagtggagccctggcc
tttgaggatgtgtacattgagcagaggaagacagtccgcatcattctggagtacgctgat
cgggttttcacctacatcttcattctggagatgttgctgaaatgggtggcctacggcttt
gtcaagtacttcactaatgcctggtgttggttggacttcttcattgtggatgtgtctata
gtcagccttatagcaaatgcgttgggcttctccgatctaggcccgattaaatcactcagg
acactgagggccttgagacccctcagggccctgtcacgttttgaagggatgagggttgtg
gtgaacgccttggtgggtgcaattccctccatcatgaatgtgctgctggtgtgtctcatc
ttctggctcatcttcagcatcatgggggtcaacctgtttgctggaaagtattactactgt
tacaacagtacggccgaggagaacttcctccccgataaggtcaacaacaaaacggagtgt
tttgcactcattaatgcaaactacactgaagtcagatggaaaaacgtcaagatcaatttt
gacaatgtgggtgctgggtacctggcgctcctgcaagtggcaacattcaaaggctggatg
gacattatgtacgcagcaatagattctagaaaggtggaggaccagcctgtgtacgaggac
aacttgtacatgtacatctactttgtcatattcatcatcttcggctccttcttcacccta
aatctcttcattggtgtcatcattgataacttcaatcaacaaaagaaaaagtttggaggt
caggatatcttcatgacggaagagcagaaaaaatactacaatgccatgaagaaactaggg
tcaaagaaaccacaaaaaccaatacccaggcctcagaacaacatccaaggcatggtgttt
gactttgtgacgcagcaggtgttcgacatttccatcatgatcctcatctgcctcaacatg
gtcaccatgatggtggagacagatgatcagtcagaggatacggaggttgtgctttactgg
gtcaatttcatcttcattgtgatcttcactggcgagtttttactgaagctctttgcactg
cgtcactactacttcaccaacggctggaacatcttcgatgtggttgtggtcatcctttca
attgtgggaatgtttctggctgacctgattgagaagtactttgtgtcaccgacactcttc
agggtgattcgtctggctcgtattggcagaatcctgcgtctcatcaagggcgccaaagga
atcagaactctgctgtttgccctcatgatgtctcttcctgccttgttcaacatcggcttg
ctacttttcctggttatgttcattttctccatctttggcatgtccaactttggttatgtg
aaacatggggctggaattgatgacatgtacaactttgagaccttcggcaacagcatgatc
atcctgtttatgatcaccacgtcagctggctgggacggcctgctcctgcccatcctgaac
tatcctccagactgtgaccccctgttggagaatgctggcacccccgctacaggagactgt
ggcaacccctctgtgggcatcttcttctttgttatgtacatcatcatttctttcctaatt
gtggtcaacatgtacatcgccatcatcctggagaacttcagtgtggccacagaggagagc
gccgacccactcagtgaggatgactttgagaccttttatgagatttgggagaagtttgac
cctgatgcctcccagttcatcacttatgccaagctttctgactttgctgatgcacttgaa
cacccactccgagttcccaagcccaacaccattgaactgatcgccatggacatgcctatg
gtgagtggcgaccgcatccactgcctggacatcctgtttgccttcaccaagcgtgtgctg
ggtgacagtggcgagctggacatgttgaggcaacaaatggaggagcgttttgtggcggcc
aatccctccaaggtctcttacgagccaatcaccaccactctgaggcgcaagcaggaggat
gtgtcagccagaatcattcagagggcctaccgctcctacctggctaggcggggctttgtc
tgtaagcgcaaaccagccaataacaaagtggagaatggcgggaacaatcaggaacaagaa
aaaaaggagagcactccctcaactgcctccctgccctcttatgacagtgtaaccaaacct
gacaaggagaaacaggatgacaacaatgagggcaagggagggaggaaagagaaaggaaga
aaccaaaaagacatcagggaatctaaatgttag
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integrated database retrieval system
