Seriola dumerili (greater amberjack): 111221724
Help
Entry
111221724 CDS
T05606
Name
(RefSeq) contactin-4-like isoform X1
KO
K06762
contactin 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111221724
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
Contactins
111221724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Ig_5
C2-set_2
Tissue_fac
C2-set
Pur_ac_phosph_N
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
111221724
NCBI-ProteinID:
XP_022600967
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MMLLWKLLVLQSLMGCLAESSVLQSPVFTKQPGSIVYPVETLERNREVVFSCEAKGSPPP
IYRWKLNGTEISPKSGSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLENFKTHRRGSVSVREGQGVVLLCGPPPHSGDLVFSWIFNEYPTFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPAPLVLRSDGVMGEYEPKIEVQFPEVVH
VAKGSTVKLECFALGNPVPSITWRKVDGVPFPRKVDMRKASGVLEIPYFQQEDAGMYECV
AENSRGMNTVKGKLSFYAPPHLIEKPQDVQKLIDDSLVWECKATGKPKPSYRWMKNGENL
ESAEERVQVANGALSISRLTLADMGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQLRS
QTLVKVGGDVLIECKPKMSPWGVISWRKGSEPLRESNRVSILNNGNLRIWNATKSDAGLY
TCVARNQFGVASSTGSVTVKEPTIITTLPSTLDVTVGESVVLPCQVSHDPSLELKFTWFF
NEQLIHFGSHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLVVRG
PPGPPTSIHVEEITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPDVVGGH
RLTATVIDLSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVVAFRPRGATGWMQAAVPSAETSRYVFKNESIQPFSPFHV
KVGVYNNEGEGPFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWNASKKRVL
GYELRYWSRSEREDTASVQRTVGNQTSTIIHGVKGSTTYYISVRAYNTAGTGPPSTTVNV
TTKKPPPSQPPVKVMWNTSNSKIILNWEQVKALENESEVTGYKVLYKKNRHSRPNVMETN
TTSVELALPTDEDYIIQIKPFGEGGEGSSSRQITIPRIPGPNAVGSASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcagtcacttatggggtgccttgcagagagc
agtgtcctgcagagtcctgtcttcaccaagcagcccggcagcatcgtgtatcctgtggaa
accctggagaggaacagggaggtggtgttcagctgcgaagccaagggaagcccacccccc
atctaccggtggaaactgaatggcacggaaatcagtcccaaatctggatctcactacagc
ctttctggcggcaatcttagaatcagccatctgaacaaagaccaagatgctggaacgtat
caatgcctcgcctccaactctttcgggaccattgtcagccgagaggccagtctaaccttt
gcatacttggaaaacttcaagactcacagaagaggctctgtatccgtccgtgaaggtcaa
ggagtggttctgctgtgcggccctccaccacattctggagatcttgtattttcctggatc
tttaatgaatacccaacgtttgtgaagcaggacactcgtcgcttcatctcacaggagaca
gggaatctgtacatcgccaaagtggagccctcagatgtcggcaactacacctgcgtggtg
accaacaccgtcacaaagacccgagtccagggtccacccgctccactggtgctccgcagt
gatggtgtgatgggtgaatatgagccaaagattgaagttcagtttccagaggttgttcat
gttgccaaaggatccactgtaaagctggaatgcttcgccctgggaaacccagtaccctct
ataacctggaggaaagtggacggcgtacccttccccaggaaagtggacatgaggaaagcc
agcggtgtcctggaaatcccatatttccagcaggaggacgccggcatgtacgagtgtgtg
gctgagaactcgaggggaatgaacaccgtgaaaggaaagctctcgttctacgcccctcct
cacctcattgagaaaccccaagatgtgcagaagctcattgacgactcgctggtgtgggag
tgtaaagccacagggaagccgaagccgtcttacaggtggatgaaaaatggagagaacctg
gagtctgctgaggagcgcgtacaggttgccaatggggcgttgtcaatcagtcgcctgacc
ctggccgacatgggaatgtaccagtgtgtggccgggaataagcatggcgaggtctactcc
aacgcagagctgcgagttatagctgttgccccagatttctctcacaatcaactgaggagc
cagacgctggtgaaggtgggaggagatgtgctcatcgagtgcaagcccaagatgtctcct
tggggtgtgatctcttggcggaagggcagcgaaccactccgagaaagtaacagggtctcg
attctcaacaacgggaaccttcggatatggaatgcaaccaaatccgacgcaggtctctac
acctgtgtggcaagaaaccagttcggcgtggcgagcagcacaggaagcgtcacagttaaa
gagccgaccatcatcaccaccctgccgtccacgctggacgtcactgtgggggagagtgtg
gtcctgccctgtcaagtgagccatgacccatctctggagctcaagttcacctggttcttc
aacgagcagctcatccacttcgggagccacgggggattttttgaaaaagtggggggtcag
cattcggcaggagacattatgattcgaaacatccagctgaggcatgctgggaagtacacg
tgcgccgtgcaaacgaaggtggacagcatttccatcgctgttgacttggtcgtcagaggt
cccccggggccccccaccagcatccatgtagaagaaatcactgataccacagcctctctg
tcctggaggcctggtcctgataatcacagtccaattacagcatataccatccaggccagg
acaccattttccctcgggtggcaggctgtcaccacagttcctgacgtggtggggggccac
cggctgacagctacagtaatagacctgagcccttgggtggaatatgagtttcgagtcctg
gcaagcaacaccatcgggaccggcgagcccagcaagccatccaaacaagcaaggacaaag
gggacctctccgaaggtcacaccagctaatgtgagtggaggcggtggcagtcgttcagaa
ttagtcatcacatgggagcctgttccagaggagctgcagaatgggccgggtttcggctac
gtcgtggcttttcgaccccgcggtgccacagggtggatgcaggctgccgtgccatccgcc
gagacgtccagatacgtctttaaaaatgagagcatccagcctttctcgcctttccacgtg
aaggtcggagtttacaacaatgagggggaagggccgtttggacctgttactactatctac
tctgctgaggaagagcctggccgagcgcccaccagggttcgtgccaagagcctctctgca
tccgagattgaagtttcatggaaagctctgccctggaatgccagcaagaagagagtgctg
ggctatgagctgaggtactggagtagaagtgaaagggaagacacagccagcgtgcaaagg
actgtgggaaatcaaacatctactattatccatggggtgaaaggcagcaccacatattac
atctcagtgagggcgtataacactgcagggacagggcctcccagcaccactgtcaatgtt
accaccaagaaaccaccacccagtcagccaccagttaaagtgatgtggaacacatcaaac
tccaagattatactgaactgggagcaggtcaaagccctggagaatgagtcagaggtcacc
ggttataaagtgctctacaagaagaaccgacacagccgccccaatgtcatggaaaccaac
accacctctgtggagctcgcgctgcccactgatgaggattatattatccagataaagcca
tttggagagggaggggaaggcagcagtagcagacagatcaccatcccaaggataccaggc
cccaacgcagttggctcagcatccaaggtctcaactctatcagcactcagtacaatagca
ctgtctttcacagcgcggacatctttatga
DBGET
integrated database retrieval system