Seriola dumerili (greater amberjack): 111221805
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Entry
111221805 CDS
T05606
Symbol
trpc4ap
Name
(RefSeq) short transient receptor potential channel 4-associated protein
KO
K11796
Trpc4-associated protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111221805 (trpc4ap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111221805 (trpc4ap)
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111221805 (trpc4ap)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111221805 (trpc4ap)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3689
Translin
Motif
Other DBs
NCBI-GeneID:
111221805
NCBI-ProteinID:
XP_022601097
UniProt:
A0A3B4VAR3
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MATLLGSESPCTGGKRRNCNNNIVTKFTASKITGQGFSRGTQLPGGLLQERDKRAKWNGI
PTLLQKLYESSHPNSDLSHAHNFLKVLSSHLSMEAMSFVTEDRKTAQESTFPNTYTFDLF
GGVDLLVEILMRPTLTMQKKKPKMNDDLVKDCLSVLYNCCICTEGVTKSLAARDDFVLFL
FTLMTNKKTFLQTATLIEDILGVKKEMIQLEGIPNLSGLVQSFDQQQLANFCRILSVTIS
EPDVGNDDKHTLLAKNAQQKRNASPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGAN
FLQELEDWYTWLDNALVLDALMQMATEDAEQSSTESSDESSLATSPLRHRLPQSMKIVHE
IMYKVEVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTASNHVVHGQNE
NCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNSQELNELSAISMKANIPEVEALVNTDR
SLVCDGKKGLLTRLLAVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHI
LFCIIDSGCTSRDVLQSYFDLLGELMKFNIDAFKRFNKYVNTPEKFQTFLTQINSSLVDS
NMLVRCIVLSLDRFESQTEDVKVVEVLSECCLLSYMARVENRLSFLFRLITIINVQTLTQ
ENVSCLNTSLVILMLARRKAKLPFYLNALREKEYAEKYPGCLLNNFHNLLRFWQRHYLNK
DKDSTCLENSSCIPFSYWKETVSVLLGSDRTSLCAIASYIDEPFMDLDRDLLED
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttctggggtccgagtccccttgtactggaggaaaacgaagaaattgcaac
aataatattgtcacaaagttcacggccagtaagattactggccagggtttcagtcgaggg
acacagctcccgggaggcctgctccaggagagagataaacgggccaagtggaatggcatc
cctactctgctgcagaagctctacgagagcagccatcccaacagtgacctctcccatgcc
cacaactttcttaaggtattatcatcccatctctccatggaggccatgtcttttgtcaca
gaggacaggaagaccgctcaggaatccaccttccccaacacatacacctttgacctcttt
ggtggagtcgatctgcttgtggagatcttgatgagacctacactaactatgcagaagaaa
aaacccaaaatgaatgatgacttggttaaggactgccttagtgttctctacaactgttgt
atatgtacggagggggtcacgaagagcctggcagcgagggatgactttgttctgtttctc
ttcaccctgatgacaaacaagaagaccttcctacagactgctactctaattgaagatatt
cttggagtcaaaaaggagatgatccagttagaaggcatccccaacctgtcaggcctggtc
caaagctttgaccaacaacagctggccaacttctgccgcatcctgtcagtcaccatctca
gaacctgatgtagggaacgatgacaagcacaccctgctcgccaaaaatgcccagcagaaa
cgcaatgctagtccctcacgggcagaggtcaaccaggtaaccctgctgaacatccctggg
ttcattgaacggctgtgtaagctggccactagaaaggtgtctgaggccacaggagcgaac
ttcctgcaggagctggaggactggtacacatggctggacaatgctctggtgctggatgcc
cttatgcagatggctactgaggacgctgaacaaagcagtacagagtcatcagatgagagt
tccttggccaccagcccgctgagacatcgactaccccagtccatgaagatcgtccatgag
atcatgtataaagtggaagtgctctatgtgctatgtgtccttctcatgggtcgacagagg
aaccaggtgcacaagatgctggctgagtttcgtctcatcccagggctcaataaccttttt
gacaagctgatctggaggaaatacactgcttcaaatcatgtggtgcacggccagaatgag
aactgcgactgtagtccagaaatttccttcaaaatccagtttttgcggctactccagagt
ttcagtgatcaccatgagaacaagtacctcctgctgaatagccaggagctgaatgaactg
agtgccatatccatgaaggctaacatccctgaggtggaagctctagtcaacacagacaga
agcctagtgtgtgatgggaagaaaggcctcctcacacgcctcctcgctgtcatgaagagg
gagcctccagactcttccttcagattctggcaggcgagggcagtggaaagttttctcaga
ggagccacctcctatgcagaccaaatgttcctcctgaagaggggattactagagcacatc
ctgttctgtatcatagatagtggctgtacctcccgagatgtcctacagagctactttgat
cttctgggagagctcatgaagttcaacattgatgccttcaaaagattcaacaaatatgtc
aacactccagagaagtttcagaccttcctgacgcagatcaacagttctttggtggactct
aacatgctggtgcgctgcattgtcctgtcattggaccgctttgagagccagactgaagat
gtcaaagtggtggaggtactgtctgagtgctgcctgctgtcctacatggccagagttgag
aacaggctttccttcctctttcgactgatcacgatcatcaacgtacagactctcacacag
gagaatgtgagctgtttaaacaccagtttggtgatcttgatgctggccagaagaaaggct
aaactgcccttctacctcaacgccctacgggagaaggagtatgctgagaagtacccgggc
tgcctgctcaacaacttccacaacctactgcgcttctggcagcgccactacctcaacaag
gacaaagatagcacctgtctggagaatagctcctgtatccccttcagctactggaaggag
acggtgtcagtgctgctgggctcagacaggacttctctgtgtgccatagcgagctacatt
gatgagcccttcatggatctggacagagacctgctggaagattga
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