Seriola dumerili (greater amberjack): 111221834
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Entry
111221834 CDS
T05606
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111221834 (ccdc174)
03041 Spliceosome [BR:
sdu03041
]
111221834 (ccdc174)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111221834 (ccdc174)
Spliceosome [BR:
sdu03041
]
Complex C
Other components
EJC/TREX
111221834 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
111221834
NCBI-ProteinID:
XP_022601132
UniProt:
A0A3B4TXY4
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MDKKKTPFQVTASSLVDLKAELYRKQEKFKQEKLEQENTGAGFKSKSKEKKPNVWSKQNA
GVSARAERDAEQLAEEKNNLDTARRKLEEKAKLYDQMTKGDFPDEETEGLFLVDFTQKII
DKKRQSLAQRDTEREEDEERDDLTPIPAPQNPEEEWVDYVDALGRSRRCMKKDLPDFKKM
DQDLKGQGKTSTEKTLLSEDMRRELQRQEWEREEEEALKRPVGPIHYEDIRGQEARELGV
GYFAFSQDQDQRRKQRETLDMLRDQTTDQRSKRERLKDKRQAILQARLAKVRQRKMKTKL
DGNEEAEREENEGEEEEAELIGPPPPPEDSPKVSTVKKVEVEIQERKDTKPGVPHVREWD
RGKEFMFSEWKSRRREERESEFAPPSAYFTDEKRQRLAKSKTLENKSKMSFKWTKGPVQI
SENKEEPQPQAKTTPSPPQQNHPTPSQPQTPSQPPPSDPPVVLAAVSAPPFNPQHPPPPF
YPPFPPPHPPQFAGPPHLLPHFPPQYFPQYMPQYPPQLQSQSQPQQPTDHSQAQQPPQGP
SQSLDDMLSFYRNST
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagacccccttccaagtgactgcttcatcgttagtggaccttaaagct
gaactgtacaggaagcaggagaaattcaaacaggagaaacttgagcaagaaaataccggc
gctggattcaaatcaaaatccaaagagaagaaacctaatgtctggagcaaacaaaacgct
ggtgtttcagcaagggctgagagagatgcagagcaactggccgaggagaagaacaatctt
gacacagcaagacgcaagttggaggagaaggccaaactctacgatcagatgacaaaagga
gactttccagatgaggagacagagggtctattcctggttgatttcacgcagaagattatt
gacaaaaagagacaatcacttgcacagagggacacagagagagaggaggatgaggaaaga
gatgatttgacacctatacctgctcctcaaaacccagaagaggaatgggtggactatgtg
gacgctttgggccgatctcgaagatgcatgaagaaggatctgccagattttaaaaaaatg
gaccaagacctcaaaggacaaggaaaaacctcaactgagaagaccttactctcagaggac
atgcgtcgagagctgcagaggcaggagtgggagagggaggaagaggaggctctgaagagg
cctgttggaccaatacactatgaggatatcagaggacaagaggctcgagagcttggtgtg
ggctactttgcgttctctcaggatcaagaccagcgtagaaaacagagagaaactctggac
atgctcagagaccagacaacagatcagcgtagtaaaagagaacgactgaaggataagagg
caggccatcctgcaggcccgactggccaaggtgaggcagaggaagatgaagaccaagctg
gatggcaatgaagaagcagagagagaggagaatgaaggagaggaagaggaagctgaacta
ataggacccccacctccaccagaggactccccaaaggtcagcacagtgaagaaggtggaa
gtggagatccaagagagaaaggacactaaaccaggagttcctcatgtcagagaatgggac
agaggcaaagagttcatgtttagcgagtggaaaagtcggcgccgggaagagcgtgaatca
gaatttgcacctccctctgcatattttactgatgagaagagacaaagactggcgaagagt
aaaactctggaaaataaatccaaaatgtccttcaagtggacaaagggccccgtacaaatc
tctgaaaacaaagaggaaccacaacctcaggctaaaactactccttcaccacctcaacaa
aatcatccaactccttcacagccacagaccccatcacagccgccaccctcagaccccccc
gttgttttagctgctgtgtctgctcccccttttaatccccagcatcccccccctccattt
tatcccccatttcctcctccacatcctcctcagtttgcaggtccacctcacctgcttcct
cacttcccccctcagtacttcccccagtatatgccccagtatccacctcagctgcagagc
cagtctcagccacagcagcccacggaccacagccaggcccagcagccccctcagggccct
tctcagagtctggacgacatgctgtccttctacaggaactctacctga
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