Seriola dumerili (greater amberjack): 111221838
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Entry
111221838 CDS
T05606
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04514
Cell adhesion molecule (CAM) interaction
sdu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111221838
04519 Cadherin signaling
111221838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111221838
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Major cadherins
111221838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
NCMAP
DUF5527
Stevor
Motif
Other DBs
NCBI-GeneID:
111221838
NCBI-ProteinID:
XP_022601137
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MNVGCVILACTLLVGASSGSKAGQPLKPLCRPGFSQNFYTVIVSRDVLHGQSILKDTTLS
SERVKFEDCQRSREVGFVSSDPYFSVRPDGTVYAEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHPHPLPLTKVGIEEMLSRVWESQPRVIKFPRKHQRGSSVNGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQVTATDSDDSTTANGMVRYRILSQSPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVVVTN
LTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEMNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKMIRFEEGVPAGTTLTVFAAQ
DPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMALLDRESIYVKNNVYEATFLAFDNGK
SGSPQASGTGTLQIYLIDVNDNAPVLIPREAQVCERARPNSRINITASDADADPNVGPFV
FELPSFPSSVRRNWTISRLSGDYAQLRLRIPYLDAGMYEIPIIVSDSGNPPLSNRSVIRV
KVCPCDDNGDCSATGAVAAAGLGTGAIIAILICIIVLLSMVLLFVVWMKRREKERQAKPL
LIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIINKPAGVRRVDERPVITES
QYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSS
GDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttggctgcgtcatcttggcgtgcaccttacttgtgggcgcatcctcggggagt
aaggcaggccagccccttaaacccctgtgcagaccaggcttctcccagaacttctacaca
gtgattgtctcgagagacgtattgcacggccagagcattctcaaagataccaccctgtcc
agtgaacgtgtgaagtttgaggattgccagcgcagccgagaggtgggctttgtcagcagc
gacccctatttcagtgtgaggcctgatgggacggtgtatgcagagcaggaagtggccaac
ctgtcagagcccgtccagttcatggtgacggcccgggggctccatgacccacacatctgg
gagaccactgttaaactggccttggctggacacccccatcctttaccacttacaaaggtt
ggcattgaagaaatgctgtcaagagtctgggaatcccagcccagagttatcaagtttcct
cgaaaacatcagagaggctcctctgtcaatgggctgaggcgacagaagagagactgggtc
atcccgcctatcaatgtgcctgaaaactcccgaggacccttccctcacatgcttgtcaga
atccgctcagatcaggacaaggatgttggcatccgctacagcatcacaggagcaggcgct
gatcagcccccgagtggcatctacaacatagatcccattagcggcaacatgtttgtcacc
caacccttggacagagaggagagagcctccttccatctgcgagcccatgcagtggacatg
aatggtaaccaggtagagaatccaatcgatctgtacatctatgtgatcgacatgaacgac
aacagacctgagtttcagaatcaagtgtacaatggctccgtggctgaaggctccaaacca
ggctcgtctgtgatgcaggtgacagccactgactcggacgactccaccacggctaacggc
atggtccgctaccgcatcctctctcagtccccccacagccccatccccaacatgttcacc
atcaacagcgagactggagacatagtgacagtggcagccggcctggacagagagaaagtg
tcccagtacacgatcattgtccaggccacagacatggagggaaacttgaactttggcttg
tccaacacagccacagctctgatctccattactgacatcaacgacaatcccccagaactg
acagtcagaacgttttctggggaggtgccagagaacaaggtgaacgtggtggtgaccaac
ctgacagtggtggacagagatcagccccacagccccaactggaacgccgtctaccgcatc
gtcagcggagacccctctggacacttcaccatccgcaccaaccccatcaccaatgagggc
atgctgacagtggtcaagccggtggattttgagatgaaccgtgcctttatgctgacagtg
gtggtgtccaaccaggcccacctggccagcggcattcagtcttcactccagtccacggcc
ggagtcaccatctctgttcaggatgtgaacgagcctcccgtcttccccgtcaaccccaaa
atgatccgctttgaggagggtgtacccgcggggacaactcttacagtgtttgctgcccaa
gatcccgaccacttcatccaccagattgtcagatactccaagctgtcagacccagctaac
tggctgaagatcaacaggaccaatggtcagatcaccaccatggctctgctggaccgagag
tccatttacgtcaaaaacaacgtgtatgaggccacattcctggcattcgacaatggtaag
tctggttcgcctcaagccagtggcacaggaaccctccagatctacctgatcgacgtgaac
gacaacgctccggtgctgataccccgggaggcccaagtgtgcgagcgtgcacgccccaac
tccaggatcaacatcaccgcatcagacgctgacgccgaccccaacgtgggaccctttgtc
tttgagctgccttcttttccctccagcgttcgccgcaactggaccatctccaggctgagt
ggtgactatgctcagctcaggctcaggattccttacctggacgcaggtatgtacgagatc
cccatcatcgtgtccgactcggggaaccctcctctgtccaaccgctctgtgatcagagtc
aaagtttgtccctgtgacgataacggggactgcagcgccacaggggctgtagcagctgcc
ggcctcggcaccggggccatcattgccatactcatctgcatcatcgtgctgctcagcatg
gttctgctgtttgtggtgtggatgaagcgcagagagaaggagcggcaggcgaagcccctg
ctgatcgaccctgaggacgatgtcagagacaacatcctcaagtacgatgaggagggagga
ggagaggaggaccaggactatgacctgagccagctgcagcagcccgagtctctggaccac
atcatcaataagccggcgggggtgcgcagggtggacgagaggcctgtgatcactgagtcg
cagtaccccgtcagacccagtctgccccaccctggagacataggagacttcatcaatgat
ggtctgagggcggcagacaacgaccccacagctcctccctacgactccctgctggtgttc
gactatgagggcagcggttcaactgccggatccgtcagctcgctcaactccaccagctca
ggggaccaggactacgactacctcaacgactggggccctcgcttcaagaagctggccgac
ctctatggaggaggggacgatgactga
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