Seriola dumerili (greater amberjack): 111221964
Help
Entry
111221964 CDS
T05606
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111221964 (tmf1)
Membrane trafficking [BR:
sdu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111221964 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
111221964
NCBI-ProteinID:
XP_022601292
UniProt:
A0A3B4VHE9
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIKEEDQWGDTTVMPYDDVTLPGKLSLSGGWG
MTQWEAPPEEKTTTPPPSSEAITTPVTRTVVDESENFFSAFLSPVDVQGVTQSQVVSVPP
AKSQRRPQEKEKKNKEAVILKDVETQKSAPADNIHENQTVAESQPVESEPSPAAPYQDTI
LLHPVSPVSSSNDLNCNPDSKLSSVKKNVGSTVNSESKTEQSQTSSEHQVEQDTTDSSEP
SAVTSEPKSSTASDSAPSPSSKEVLLEHKDSKVEDRQNDTPSPPVSAFSSGTSTTSDIEV
LDHESVLSESSASSRQETGEGKAGLHLMQGSFQLLTASTCGDFPRLEDYPKLTESCGSSS
DAFERIDSFSVQSLDSRSVSEVNSDDEIPGSRTLASVTAGPAPLTVSSAVCQKQEDSVVE
KVGEEEEEEEEAFTETMREQSLDEMEESGRSATPVNSEQPEELTEQEQESEANVTLSDPS
SNTEEQITPPITEEMKSVSTVQILELQKVIDELSGRLEKRESQLLAVSKDKAGLEEECDN
LKDEVISLKEESSTVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLREELSTRLNS
SDTMEIIKEKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTKIIKQQKKIKEQE
EELRHLQQVLDGKEEVEKQHRENIKKLNAVVERQEKELSRLQSDSEELQEKNRSLQAALD
NSYKELAELHKANASRASVAEEAALSRETQAKEQLSLALEKAQEEARMQQEVLANQVADL
RLALQRAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQAS
LGGQTASWEKLEKNISDRLADAQAQLAVAVEKERSATEELLSIKSQLASLESQNSLLRQE
KARHLAQLEAEKNKREKLEDESSREHVELENLRGEHSRMLDEAKKEKLLLTNQLEMEKMK
VEQEKKKSYLAQEALKEKERKAMTHSVGEPAASSTPSLSRSSSISGVDNAGLHTPILSQD
DSLDHSLGTMTMSVSMSGTNLYEAARLSGGSSIIENLQSQLKLREGEIAQLQLEISSLER
SRSVMAEELVRLTNQNDEMEEKVKEIPKLKIQLKDLEQRHNTILQMYGEKAEEAEELRLD
LEDVKNMYKTQIDELLQNQK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcatctcacctgtccagcttcgctaaacaagcgttaacgacagct
cagaagtcaatcgaccgtgttctggacatcaaagaagaggaccaatggggtgacacaact
gtgatgccctacgatgatgttacattacctggaaagctgtcattaagtggaggatggggg
atgacgcagtgggaagcaccccccgaggaaaagaccaccactcctcctccctcctcagag
gccatcactacccctgtcacccgcactgttgtggatgaatcagaaaacttttttagtgcc
tttctgtcacctgtagatgttcaaggtgtcacccaaagccaggtagtgtctgtaccccct
gctaagtcccaaaggcggcctcaggagaaggagaagaaaaacaaagaggctgtgatccta
aaagacgtggagactcaaaagtcagcacctgctgataacattcatgagaatcaaacagtt
gctgagagccagccagtggagtctgagccttcaccggcagcaccttatcaagacactatc
ctcttgcatcctgtgtctcctgtttcttcttccaatgatctgaattgtaaccctgacagc
aaattgagtagcgtaaaaaaaaatgttggctcaacagttaattcagaatcaaaaacagag
caatcacagacatcatcagaacaccaggttgagcaggataccactgactcctctgaacct
tctgctgtcacatctgaaccgaagagctctaccgcttctgattctgcaccctcaccatcc
tctaaagaagtactcctagaacataaagactcaaaggtggaggaccgtcaaaatgacacc
ccctcccctccagtaagcgctttctcctcaggaacctctaccaccagtgacattgaagtg
cttgaccatgagagtgtgttgagtgagagctcagccagttccagacaagaaacaggtgag
ggtaaggctggccttcacttaatgcagggctctttccagcttctcactgcctccacctgt
ggagatttcccccgcctggaggactaccccaaactcacggagagctgcggttcctcctca
gatgcatttgaacgcattgattcattcagtgtgcaatcactggatagccggagtgtcagt
gaggttaactcagatgatgagatccctggcagtcggacactagcgtctgtcactgcaggt
ccggctcctctaacggtgtcgtcagctgtatgtcagaagcaggaagatagtgtggtggag
aaggtaggagaggaggaagaggaggaagaagaggcattcactgaaacaatgagggagcag
tcactggatgagatggaggagagtgggcggagtgcgacacctgtgaatagtgagcagcct
gaagagttgacagagcaggaacaggaatctgaggctaatgtcacattatctgatccctcc
tccaacactgaagaacagatcactcctccaatcacagaagagatgaaaagtgtctcaaca
gttcagatactggagcttcaaaaggtgattgatgagctgtcaggccgcctggagaagaga
gagtctcagctgctagcagtcagcaaagacaaggccgggctggaggaggagtgtgacaat
ctcaaagatgaagtgataagcctcaaggaggagagctccactgttcagtccctgaaggat
gagttcacccagcgcatagcagatgcagagagaaaggctcagttggcctgcaaagagaga
gatatagccaagaaggagataaagggcttgcgagaagagctctctacaaggctgaactcc
agtgacacaatggagatcatcaaagagaaagaggagcagatcaggggtctactggaagag
ggtgaaaagttgtccaagcagcagctgcagcacagcaacatcatcaagaagctgcgtgtg
aaggagaaggaaagcgacacaaaaatcatcaagcagcagaagaaaatcaaggaacaggag
gaagagctcaggcacctgcagcaggttctggatgggaaggaggaggtggagaaacagcac
agggaaaacatcaagaagctgaacgctgtggtggagcggcaggagaaagagctgagcagg
ctgcagtcagactctgaggagctgcaggagaaaaacagaagcctacaggccgctctggac
aactcttacaaggagctggcagaactccacaaggcgaatgccagcagagccagcgtggct
gaagaagcagctctgagcagggaaacgcaggccaaggagcagctgagtctggctctggag
aaagcccaggaggaggccaggatgcaacaggaggtcctggccaaccaggtggctgacctg
aggctggctctgcagagggctgagcaacagcaggcaaggaaagaagattatttgagggag
gagatcagtgaacttcagcagaggctccaggaggcagagacaaggaaccaagagctcagt
cagagtgttacctcggcaacacggccccttctgcgacagatcgagaacttacaggcctca
ttgggcggacaaacagcatcctgggaaaaactggagaagaacatctctgataggctcgct
gatgcccaggcacagctggctgttgctgtggagaaggagcgttcagcaacggaggaactg
ttgtccatcaagtcccagctggcttctctggagtcccagaattccttgctccgccaggag
aaagcccgccacctggcacaactggaggctgagaagaacaagagagagaaactggaggat
gagagcagcagggagcatgttgaattggaaaatctgcgaggagaacacagtcgaatgctg
gacgaggccaagaaggaaaagctgctgttgaccaatcagctagaaatggagaagatgaag
gtggagcaagagaagaagaaaagctacttggcacaagaggcactcaaggaaaaggagcgg
aaggctatgacccactctgtaggagagcccgcagcgtcttccacaccctccctgtcccgc
tccagctccatcagtggtgtggacaatgctggtctgcacacccctattctttcccaggat
gactctttagaccactcactaggcaccatgaccatgtctgtgtcgatgagtgggaccaac
ctgtacgaggctgccaggctgtctggggggtcgagcatcatagagaacctccagtctcag
ctcaaactaagagaaggagagatagctcagctgcagcttgaaatctctagtctggagagg
agtcgctctgtgatggcggaggagctggttcgactgactaatcaaaatgacgagatggag
gagaaggtgaaggagatccccaagttgaaaattcagctcaaggatctggagcaaaggcac
aacaccatcctgcagatgtatggagaaaaggctgaagaggcggaggagctgagattggac
cttgaagatgtgaagaacatgtacaaaacccagattgatgaactgctgcagaaccagaaa
taa
DBGET
integrated database retrieval system
