Seriola dumerili (greater amberjack): 111222068
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Entry
111222068 CDS
T05606
Name
(RefSeq) protein polybromo-1-like
KO
K11757
protein polybromo-1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111222068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111222068
03036 Chromosome and associated proteins [BR:
sdu03036
]
111222068
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111222068
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
111222068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111222068
NCBI-ProteinID:
XP_022601347
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDDSQTSSLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTSDFQLL
FNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGEYDEDDDDGYDAQDNPGGSTEDES
APSCLKEVLEQLLDAVVSHTEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIIAQKI
QLGHYRSVSAMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFSQKKSEMEHGEPIKSSI
RIRNRRSAQGDRLSAITMALQYESDDEGILSGSVHYDEGESEAESMTSNMDMSNPIFQLY
EAVRGARNSQGQLISEPFLQLPSRKDYPDYYHQISQPICLHQIKNKMKNNEYESVEHIDS
DITLMFENAKRYNVPHSSIYKRALKLQHIQQMKKKELLQRDDDDGDSMLSSATSDTSSTK
RKSHKKNTKKNRMKALLAAVTDAREAGSGRRLCDLFMVKPSKKDYPDYYKVILEPMDLRT
IEHNIRSDKYMTEDSMVEDMKLMFRNARHYNEEGSQVYNDADILEKIMKDRRRDLGPATD
DDDMMSPKLKIRKNSITLKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRA
ELPDYYIAIKKPVDMEKIKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDALV
LHRVLLETRRDLEGGDDAHVPDVPRLIQELIRSLFVSVLSHQDDEGRCYSDSLAEIPALD
PANPEKPRLNFEIIRTNVDRGRYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQF
FIRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKEKLPKEFEEDKIKREEEKREAEKR
EDSVGGSWQSNLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGEK
WLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLHPEGF
RAEDVFVCESRYSAKSKSFKKIKMWTMPLSSVRFVPREVPLPVVRVASMFAPKQEEKPAE
MADESKMTDSIVEKEREDVPMDMTNGEPGCQYYEQLCYNNLWLKVGDCVYIGSHGLVRHR
VGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCIIGKCVV
SSFKDYLSCRPTEVPEENVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYYFRKLI
VPQKEPSPLLDRKIEELEAKFADMTDEELEDLGDDDGELGDQSLPQMQSSMSSDMDIMPY
TPPQSTPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLESSRKAEYEERAAKVAEQQERDRAHHQTSPRAGTPVGALMGVVPPPTPMGMLNPSMTP
VSEGMMGAYRSTMMPLQGHVEGMVSMTGIPLHHMGVPVFPQHLLPVMPGFPGMPFFGVNG
MGGGPGVGNIHGSQMGLMGPGQQAPPPYPGQGQMGQPALQQPTTPVFVSPPAKSQRLLHS
EAYLRYIEGLTAESSTISKWDQALSVQKQDVRLTKEQESRLPSHWLKSKGAHKTMADALW
RLRDLMLRDTLNIRQTHNL
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaaggagacgggcgacttccccttctagcagtgtgagtggaggagatttt
gacgatagccaaacttcatcgttagtgtcttcaattgggagaaagaggagaaggacctca
aacataccaactgtggatcctattgctgtatgtcatgaactatataacacaatcagagat
tacaaggatgaccagggcaggatgttgtgtgaactgttcatcagagcccctaaacgaagg
aatcaaccagactactaccacgtggtgtctcagcctattgacatgatgaaaatccagcag
aaattaaagatggaggaatatgatgatgttgaacaactcaccagtgactttcagttgtta
tttaacaatgcaaaaacctattacaagtctgacagtcctgagtacagggcagcctgtaaa
ctgtgggacctttacctgcgcaccaagaatgaatttgttcagagaggggaatatgatgag
gatgatgatgatgggtatgacgcacaagacaatcctggagggtccactgaagatgagagt
gcacctagctgcttgaaagaggtccttgagcagctccttgatgctgtggtgtctcacact
gagcctactggccgtctggtcagtgagctgttccagaagcttccctccaaaatgcaatat
ccagattattatgccatcattaaagaaccaattgatctgaaaatcatcgctcaaaagatt
cagttgggccactacaggagtgtcagcgctatggctaaagacattgatttgctggtcaag
aatgccaaaacttataatgagcccggatctcaggtgtttaaggatgcaaacaccattaaa
aagattttttcacaaaagaagtctgagatggaacatggagaaccaatcaaatccagcatt
cgtatcaggaatagaaggtctgcccagggagatcgcctctctgctatcacaatggctctt
cagtatgaaagtgatgacgaaggcatactctccgggtctgttcactatgatgagggggaa
tcagaggcagagagtatgacctctaacatggacatgagtaacccgatcttccagctttat
gaagctgtgcgaggtgccaggaacagccagggccagctgatctctgagcctttcctgcag
ctgccctccaggaaggactaccctgactactaccaccagattagccaacccatctgcctc
catcagattaagaacaagatgaagaacaacgaatacgagagtgttgagcatattgactct
gatataacgctgatgtttgagaatgccaaacgctacaatgttcctcactcctccatctac
aagcgtgcgctcaagctccaacacattcagcagatgaagaaaaaagagcttttacagagg
gatgatgatgatggagacagcatgctctcctctgccacgtctgacaccagtagtacaaaa
agaaaaagtcacaagaagaacacaaagaaaaacagaatgaaagctctcttagctgcggtc
actgatgcgcgagaagccggcagtggtcggagactgtgtgacctcttcatggtcaagccc
tcaaagaaggactaccccgactactacaaggtcatcctggaaccaatggacctcaggacc
attgagcacaacatccgctcagacaagtacatgactgaagattcaatggtggaagatatg
aagctgatgttccgcaatgcacgacactacaatgaggaaggctcccaggtctacaatgac
gctgacatccttgagaagattatgaaagacagacgcagggatcttgggccagcgactgat
gatgatgacatgatgtccccaaagttgaaaataagaaagaacagtatcactctaaagaag
tccaagtatttaacccccctacagcaaaagctgaatgagctttatgaggctgtcaagaac
tacacagataagcggggccgtcgtctcagcacaattttcctgcggctgccgtctcgtgct
gagctgcctgattactacatcgccatcaagaaacccgtggacatggagaagatcaaaagc
cacatgttggctaataaataccaagatgtggatgcactggtggaggacttggtgctcatg
ttcaacaatgcctgtacttacaacgaacccgagtctctgatttaccgtgacgctctggtg
ctgcacagggtgctgttagagacgaggcgtgacctggagggaggagatgatgcccatgtg
cctgatgtgccccgcctcatccaggaacttatccgcagcctctttgtttccgtgctcagt
caccaagacgacgagggccgttgctacagtgattcactcgctgagattcccgccctagat
cctgcaaatcctgagaagccacgactcaattttgagatcatcaggactaatgtagaccga
gggcgttacaagaggttggatgtatttcaggatcatatgtttgaagtgctggaaaaggcc
agacgattgaataggaccgactctgagatctttgaagatgctgtggagctgcagcagttc
tttatccggatcagagacgagctgtgtaagaatggagagatcctgatgtctcctgctctc
agctatacctccaaacatctgcatagtgatgtggaaaaggagaagaaagagaaactaccc
aaggagttcgaggaggacaaaatcaaaagggaagaggagaaaagggaagctgagaagagg
gaggattctgttggaggatcatggcagtctaacctgcagcgtacctacagtcaggactgt
agcttcaaagacagtatgtaccatgtgggagactatgtgtatgtggagcctgcagagccc
aacctccagccccatatcatctacattgaacgcctttggcaagatgacaccggtgagaag
tggctgtatggctgctggttctacaggccaaatgaaacatttcatctcgccacaagaaag
tttttggagaaggaagtctttaagagcgattactacaacaaagctcctgtcagcaagatt
cttggcaaatgtgtggtcatgtttgtgaaggagtacttcaaacttcacccagaaggcttc
agagctgaggatgtatttgtctgtgaatcacgctactctgccaaatccaagtccttcaag
aagatcaagatgtggaccatgcccctgagctcggttcggttcgttcccagagaggtaccc
ttacctgtggtccgtgtggcatccatgtttgcccccaaacaagaggagaaaccagcagag
atggctgatgaaagtaaaatgacagatagtattgtggagaaggagagggaggatgttcca
atggatatgaccaatggggagccagggtgtcagtactatgagcagctctgctacaacaac
ctgtggctcaaagtgggagactgtgtctacattggttctcatggactagtgcgccaccga
gtgggcaggattgagaaaatgtggatgcgagatggagcaggctacttctttggtcccatt
ttcatccatccagaagaaacagaacatgagcccactaagatgttctacaagaaggaggtg
ttccttagcaacctggaggagtcttgtcccatgacctgcatcataggaaagtgtgtggtc
tcgtccttcaaagactacctgtcatgccggccaactgaagtacctgaagagaatgtgctg
ctctgcgagagccgctacatcgagagtgagaagcagatgaagaagttcaaggggcttaag
cgcttttcactttctgggaaggtggtggaggatgaaatatactattttagaaagctcata
gtgccccagaaggagccatcacctctgttggacaggaaaattgaggaactggaggctaag
tttgctgacatgacagatgaggagctagaggatcttggggatgatgatggcgagctaggg
gaccagtctcttcctcagatgcaatcttctatgtccagtgacatggatatcatgccttac
actcctccacagtccacaccaaaatctattaaaggtctgtcaaagaaggaaggctcaaag
cggaagatcaacatgagtggctacatcctgttcagcagtgagatgcgagccgtcatcaaa
gcccagcacccagacttctccttcggggagctgagccgcctcgttggaacagagtggagg
aatctggagagttccaggaaagcagagtatgaagagcgagcagctaaagtggccgagcag
caggagcgtgacagagcccatcatcagacgtcccctagagcaggtaccccagtaggggca
ctgatgggggtggtgcctcccccaacccccatggggatgctaaatcccagcatgacgcct
gtgtcagaaggaatgatgggtgcatataggtcaactatgatgcccctgcagggccatgtt
gaaggcatggttagtatgactggcataccactacatcacatgggggtgcctgtttttccc
caacatctcctgcctgttatgcctgggttccctggaatgccattctttggtgtcaatggc
atgggaggtggacctggagtaggaaacattcatggatcccagatgggtttgatgggccca
gggcagcaagctccaccaccatatccaggacaaggccagatgggacaacctgcactccag
cagccaaccaccccagtgtttgtgtctccgccggccaagtctcagcggctgctccactct
gaggcatacctcagatacatcgagggccttactgcagaatcctctactattagcaagtgg
gaccaagccctttcagttcaaaaacaagatgtgcgcctgacaaaagagcaagagagcaga
ctgccatcccattggctgaagagtaagggggcccacaagacaatggcagatgcactttgg
cgactccgtgacctgatgctgcgagacaccctaaacatccgtcagacgcacaacctgtag
DBGET
integrated database retrieval system