KEGG   Seriola dumerili (greater amberjack): 111222068
Entry
111222068         CDS       T05606                                 
Name
(RefSeq) protein polybromo-1-like
  KO
K11757  protein polybromo-1
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111222068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdu03021]
    111222068
   03036 Chromosome and associated proteins [BR:sdu03036]
    111222068
Transcription machinery [BR:sdu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     111222068
Chromosome and associated proteins [BR:sdu03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    111222068
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 111222068
NCBI-ProteinID: XP_022601347
LinkDB
Position
Unknown
AA seq 1639 aa
MALKRRRATSPSSSVSGGDFDDSQTSSLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTSDFQLL
FNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGEYDEDDDDGYDAQDNPGGSTEDES
APSCLKEVLEQLLDAVVSHTEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIIAQKI
QLGHYRSVSAMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFSQKKSEMEHGEPIKSSI
RIRNRRSAQGDRLSAITMALQYESDDEGILSGSVHYDEGESEAESMTSNMDMSNPIFQLY
EAVRGARNSQGQLISEPFLQLPSRKDYPDYYHQISQPICLHQIKNKMKNNEYESVEHIDS
DITLMFENAKRYNVPHSSIYKRALKLQHIQQMKKKELLQRDDDDGDSMLSSATSDTSSTK
RKSHKKNTKKNRMKALLAAVTDAREAGSGRRLCDLFMVKPSKKDYPDYYKVILEPMDLRT
IEHNIRSDKYMTEDSMVEDMKLMFRNARHYNEEGSQVYNDADILEKIMKDRRRDLGPATD
DDDMMSPKLKIRKNSITLKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRA
ELPDYYIAIKKPVDMEKIKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDALV
LHRVLLETRRDLEGGDDAHVPDVPRLIQELIRSLFVSVLSHQDDEGRCYSDSLAEIPALD
PANPEKPRLNFEIIRTNVDRGRYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQF
FIRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKEKLPKEFEEDKIKREEEKREAEKR
EDSVGGSWQSNLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGEK
WLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLHPEGF
RAEDVFVCESRYSAKSKSFKKIKMWTMPLSSVRFVPREVPLPVVRVASMFAPKQEEKPAE
MADESKMTDSIVEKEREDVPMDMTNGEPGCQYYEQLCYNNLWLKVGDCVYIGSHGLVRHR
VGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCIIGKCVV
SSFKDYLSCRPTEVPEENVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYYFRKLI
VPQKEPSPLLDRKIEELEAKFADMTDEELEDLGDDDGELGDQSLPQMQSSMSSDMDIMPY
TPPQSTPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLESSRKAEYEERAAKVAEQQERDRAHHQTSPRAGTPVGALMGVVPPPTPMGMLNPSMTP
VSEGMMGAYRSTMMPLQGHVEGMVSMTGIPLHHMGVPVFPQHLLPVMPGFPGMPFFGVNG
MGGGPGVGNIHGSQMGLMGPGQQAPPPYPGQGQMGQPALQQPTTPVFVSPPAKSQRLLHS
EAYLRYIEGLTAESSTISKWDQALSVQKQDVRLTKEQESRLPSHWLKSKGAHKTMADALW
RLRDLMLRDTLNIRQTHNL
NT seq 4920 nt   +upstreamnt  +downstreamnt
atggccttgaaaaggagacgggcgacttccccttctagcagtgtgagtggaggagatttt
gacgatagccaaacttcatcgttagtgtcttcaattgggagaaagaggagaaggacctca
aacataccaactgtggatcctattgctgtatgtcatgaactatataacacaatcagagat
tacaaggatgaccagggcaggatgttgtgtgaactgttcatcagagcccctaaacgaagg
aatcaaccagactactaccacgtggtgtctcagcctattgacatgatgaaaatccagcag
aaattaaagatggaggaatatgatgatgttgaacaactcaccagtgactttcagttgtta
tttaacaatgcaaaaacctattacaagtctgacagtcctgagtacagggcagcctgtaaa
ctgtgggacctttacctgcgcaccaagaatgaatttgttcagagaggggaatatgatgag
gatgatgatgatgggtatgacgcacaagacaatcctggagggtccactgaagatgagagt
gcacctagctgcttgaaagaggtccttgagcagctccttgatgctgtggtgtctcacact
gagcctactggccgtctggtcagtgagctgttccagaagcttccctccaaaatgcaatat
ccagattattatgccatcattaaagaaccaattgatctgaaaatcatcgctcaaaagatt
cagttgggccactacaggagtgtcagcgctatggctaaagacattgatttgctggtcaag
aatgccaaaacttataatgagcccggatctcaggtgtttaaggatgcaaacaccattaaa
aagattttttcacaaaagaagtctgagatggaacatggagaaccaatcaaatccagcatt
cgtatcaggaatagaaggtctgcccagggagatcgcctctctgctatcacaatggctctt
cagtatgaaagtgatgacgaaggcatactctccgggtctgttcactatgatgagggggaa
tcagaggcagagagtatgacctctaacatggacatgagtaacccgatcttccagctttat
gaagctgtgcgaggtgccaggaacagccagggccagctgatctctgagcctttcctgcag
ctgccctccaggaaggactaccctgactactaccaccagattagccaacccatctgcctc
catcagattaagaacaagatgaagaacaacgaatacgagagtgttgagcatattgactct
gatataacgctgatgtttgagaatgccaaacgctacaatgttcctcactcctccatctac
aagcgtgcgctcaagctccaacacattcagcagatgaagaaaaaagagcttttacagagg
gatgatgatgatggagacagcatgctctcctctgccacgtctgacaccagtagtacaaaa
agaaaaagtcacaagaagaacacaaagaaaaacagaatgaaagctctcttagctgcggtc
actgatgcgcgagaagccggcagtggtcggagactgtgtgacctcttcatggtcaagccc
tcaaagaaggactaccccgactactacaaggtcatcctggaaccaatggacctcaggacc
attgagcacaacatccgctcagacaagtacatgactgaagattcaatggtggaagatatg
aagctgatgttccgcaatgcacgacactacaatgaggaaggctcccaggtctacaatgac
gctgacatccttgagaagattatgaaagacagacgcagggatcttgggccagcgactgat
gatgatgacatgatgtccccaaagttgaaaataagaaagaacagtatcactctaaagaag
tccaagtatttaacccccctacagcaaaagctgaatgagctttatgaggctgtcaagaac
tacacagataagcggggccgtcgtctcagcacaattttcctgcggctgccgtctcgtgct
gagctgcctgattactacatcgccatcaagaaacccgtggacatggagaagatcaaaagc
cacatgttggctaataaataccaagatgtggatgcactggtggaggacttggtgctcatg
ttcaacaatgcctgtacttacaacgaacccgagtctctgatttaccgtgacgctctggtg
ctgcacagggtgctgttagagacgaggcgtgacctggagggaggagatgatgcccatgtg
cctgatgtgccccgcctcatccaggaacttatccgcagcctctttgtttccgtgctcagt
caccaagacgacgagggccgttgctacagtgattcactcgctgagattcccgccctagat
cctgcaaatcctgagaagccacgactcaattttgagatcatcaggactaatgtagaccga
gggcgttacaagaggttggatgtatttcaggatcatatgtttgaagtgctggaaaaggcc
agacgattgaataggaccgactctgagatctttgaagatgctgtggagctgcagcagttc
tttatccggatcagagacgagctgtgtaagaatggagagatcctgatgtctcctgctctc
agctatacctccaaacatctgcatagtgatgtggaaaaggagaagaaagagaaactaccc
aaggagttcgaggaggacaaaatcaaaagggaagaggagaaaagggaagctgagaagagg
gaggattctgttggaggatcatggcagtctaacctgcagcgtacctacagtcaggactgt
agcttcaaagacagtatgtaccatgtgggagactatgtgtatgtggagcctgcagagccc
aacctccagccccatatcatctacattgaacgcctttggcaagatgacaccggtgagaag
tggctgtatggctgctggttctacaggccaaatgaaacatttcatctcgccacaagaaag
tttttggagaaggaagtctttaagagcgattactacaacaaagctcctgtcagcaagatt
cttggcaaatgtgtggtcatgtttgtgaaggagtacttcaaacttcacccagaaggcttc
agagctgaggatgtatttgtctgtgaatcacgctactctgccaaatccaagtccttcaag
aagatcaagatgtggaccatgcccctgagctcggttcggttcgttcccagagaggtaccc
ttacctgtggtccgtgtggcatccatgtttgcccccaaacaagaggagaaaccagcagag
atggctgatgaaagtaaaatgacagatagtattgtggagaaggagagggaggatgttcca
atggatatgaccaatggggagccagggtgtcagtactatgagcagctctgctacaacaac
ctgtggctcaaagtgggagactgtgtctacattggttctcatggactagtgcgccaccga
gtgggcaggattgagaaaatgtggatgcgagatggagcaggctacttctttggtcccatt
ttcatccatccagaagaaacagaacatgagcccactaagatgttctacaagaaggaggtg
ttccttagcaacctggaggagtcttgtcccatgacctgcatcataggaaagtgtgtggtc
tcgtccttcaaagactacctgtcatgccggccaactgaagtacctgaagagaatgtgctg
ctctgcgagagccgctacatcgagagtgagaagcagatgaagaagttcaaggggcttaag
cgcttttcactttctgggaaggtggtggaggatgaaatatactattttagaaagctcata
gtgccccagaaggagccatcacctctgttggacaggaaaattgaggaactggaggctaag
tttgctgacatgacagatgaggagctagaggatcttggggatgatgatggcgagctaggg
gaccagtctcttcctcagatgcaatcttctatgtccagtgacatggatatcatgccttac
actcctccacagtccacaccaaaatctattaaaggtctgtcaaagaaggaaggctcaaag
cggaagatcaacatgagtggctacatcctgttcagcagtgagatgcgagccgtcatcaaa
gcccagcacccagacttctccttcggggagctgagccgcctcgttggaacagagtggagg
aatctggagagttccaggaaagcagagtatgaagagcgagcagctaaagtggccgagcag
caggagcgtgacagagcccatcatcagacgtcccctagagcaggtaccccagtaggggca
ctgatgggggtggtgcctcccccaacccccatggggatgctaaatcccagcatgacgcct
gtgtcagaaggaatgatgggtgcatataggtcaactatgatgcccctgcagggccatgtt
gaaggcatggttagtatgactggcataccactacatcacatgggggtgcctgtttttccc
caacatctcctgcctgttatgcctgggttccctggaatgccattctttggtgtcaatggc
atgggaggtggacctggagtaggaaacattcatggatcccagatgggtttgatgggccca
gggcagcaagctccaccaccatatccaggacaaggccagatgggacaacctgcactccag
cagccaaccaccccagtgtttgtgtctccgccggccaagtctcagcggctgctccactct
gaggcatacctcagatacatcgagggccttactgcagaatcctctactattagcaagtgg
gaccaagccctttcagttcaaaaacaagatgtgcgcctgacaaaagagcaagagagcaga
ctgccatcccattggctgaagagtaagggggcccacaagacaatggcagatgcactttgg
cgactccgtgacctgatgctgcgagacaccctaaacatccgtcagacgcacaacctgtag

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