Seriola dumerili (greater amberjack): 111222173
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Entry
111222173 CDS
T05606
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111222173 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111222173 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111222173 (ncor1)
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111222173 (ncor1)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
111222173 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
111222173
NCBI-ProteinID:
XP_022601490
LinkDB
All DBs
Position
Unknown
AA seq
2367 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPPHSVQYTFTGTRHQQDFTVPDYRAHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTGQPDHEALEAKRPRMETVSEAHITRTPPSAGGIVL
PMPHSVQDSLRATVEVKKESQFTVKVESPSQGGATLHMVEEQDTSPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEDKSDEKTEEDKSEKSEKKEDEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAATVAAEEAPPPA
PEPVLPDPPQLPKSDPAQKSMKEPAKTPVASMDANKAGAGETGETSRWTEEEMEVAKKGL
VEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEGLA
TASPDDDEDNADDSEGGDNSSDTESAPSPSQADSSKSGDSKRADSAAGDAQCSDQDKGQA
SNGKTPEPAYGELCVKEEKSPESETGSQEEKARVSAYTGAVHPKTEPQDVDMKTGEVQVK
MEPEIKEKGEKGDHGEMHRDLHSDNDSSATCSADEDVEAEPERQRIFSMEKPSLLTPPGT
VLVSSPKQTQLNIQQLQQRAAAIPPMVPGPFGPGGVPISGFAMLQHQIKAVHESAHQEEK
QRQDQGDLDRRPPFNTRSPTVLDRDVLHPASNQLVGSMPDGVRVTFSRPSRPPNIPSPPP
LIPTTKPTDKPSFIQGGSISQGTPGTYLPPHAVYGPEGTKSTVGSISLGLPRQQDPSKPG
AAVSSIQDGRGNPAKVGEGMAFRGSITQGTPALPQSSIAADLLKGTITKLATEDLSIPDK
ARGDQLTKGHVIYEGKSGHILSFDAIKNPRENTRSPRTGHDMKRTYDMMEGSMGRGHPGR
EGAPFEGLISRALPREGIHGDSKERPLMTGSIMQGTPRTAAETYEDAMKYGKQIKRESPP
IRSFEGGIGKGKPYEGVNTIKEMGRSIHEIPRQDQSGQDICKTPDMSDRRVMEGAISQIH
PLNQPTIKHNVKSLITSPSKLPHSMPQLEAMERAKYEESKAVRHTSVVNSTTSVLRSTHQ
EASKSQLSPGMYEDANARRTPVNYSTNPVSRGSPMLGRAPEGGMSSAKSAAHERKSAMTP
TQRDSVPAKSPVSGGDPVASHSPFDPHHRPVVPGEVYRPHLPPHLDPTLAFHRVLDPAFM
FSRQPSPTNYHNTYQLYTMENTRQTILNDYITSQQMQVIPRPDMARGLSPREQPVAIPYA
AGTRGIIDLAQMPPTILLPHPGGTGTPTLERIAYLPGAQPPFPPRAFNPTSISPGHPAHL
AAAAAASAERERERERDREHQEKEREKEREREQREREREREREREREMRERERERDRERA
NEYIRGGGPEQPGRPGSRGYLHSPSPSLRTQEVVVQQRPSIFQGKSVITSLMPHSAAATP
AVQSSSRYGTAADALAALVDAAASAPQMDVAKVKESKHERDDDMSSSAAARRAASLSEQQ
QQEAERRSMQSPYGAMSLPGGKPHPAYSEGPGVGVKDKGPQTSKSRIEEELRTRGKTTIT
AASFIDVIITRQIASDKDSRERGSQSSDSSSSLSSSRYDNTGGGAIEVISPASSPVQLQQ
DKPEDGQQQAAAGMRAYDMSRYRPSGEPSQPSSQQPPSSQADSYSQVPKTHRVMTLADHI
SHIITQDFARNQDPPPVSSSASATFQSVVPSVSSSGRAKVPSRYSPENQVQALHHQRPSS
RVSPENAPDKPRARPGKSPERGGRPMENYEPISPPQSYQGMDKQEAAGPPPQRREAENSE
IRNDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSNSGVGDSDVGNAQPGTEIF
NLPAVTSSSSINPRNHSFSDPASNLGLEDIIRKALMGNLEERQDEHQGGIGAQCAINNTP
GAGGDARQEANPSPSMGKQKQSKANSRKSKSPNLGQAYAGGERPSSVSSVHSEGDYHRQA
QAQPQWSWDDRPSSTGSMQFPYNPLTMRILSSTPPTSIASPSIQSQQQQQQQQQQPQPPP
AGAPVAQQRVWQSLLSEQYETLSDSDD
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccccagccaggggagcttcagcagcgagcagagccga
tacccaccacattctgtccaatacaccttcaccggcacgcgccaccaacaggatttcacc
gtcccagactatcgggctcacatgcaggatccgcagggtcggagaagaccatctttactg
tctgaattccaccctggaactgaaaggcctccggagagacgccatggctatgaacagcag
tttcactccgtcacaggccagcctgatcatgaggccttggaggctaaacgccctcgcatg
gaaactgtttctgaggcccacatcactcgcactcccccctctgctgggggtattgtcctg
cccatgccccattcagtacaggacagcttaagagccactgtggaggtcaaaaaggagtct
cagttcactgtcaaagtggagtccccatcccagggaggagcgacactacacatggtggaa
gagcaggacacttctccctccaaactgtccaaagaggagctgatccagagtatggaccgc
gtggacagagagattgctaaagtggagcagcagattttcaagctgaagaaaaagcagcaa
caactggaggaggaagcagcaaagccagtggagccagaaaagccagtgacccctccccca
gtggagcacaagcaccgcagcatagtccagatcatctacgacgagaacaggaaaaaagcc
gaagaggcccataaaatactggagggtcttggtcccaaggttgagctgcccctgtataat
cagccgtcagacacaaaggtttaccatgacaacatcaagaccaaccaagtcatgaggaag
aagctgattttgttctttaagaggaggaatcatgctcgcaaacaaagggaacagaagatc
tgccagcgctatgaccagctgatggaagcgtgggagaagaaggtggagcgaatggagaac
aaccccagacgcaaagccaaggagagcagaacacgggagtactatgagaggcaattccct
gagatccgcaagcagagagagcagcaggagcgcttccagagagttggacaaagaggaaca
ggtctttctgcaacaattgccagaagcgagcatgagatttctgaaatcatagatggcctt
tctgagcaggagaacaatgagaaacagatgagacagctgtccgtcatccctcccatgatg
tacgactccgagcagaggcgagtgaagttcatcaacatgaacggcctgatggacgacccg
atgaaggtgtacaaagcccggcagttcatgaatgtttggaccgaacatgagaaggagatc
tttaaggagaagtttgtccaacaccccaagaactttggcctgattgcctcgtatctggag
agaaagtgtgttgctgactgtgtcctgtattattacttaaccaagaagaaccacaactac
aagacgttggtgagacggaattatggacgccggagaggaaggaaccagcaaataacacgt
ccctcacaagaagacaagtcagacgaaaaaaccgaagaggacaaatctgaaaaatcagag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgccgtaagggaaggatcacc
acacgctccatggccaatgaggctgcaactgtggcggccgaggaagcacctccccctgcc
cctgagccggtcttgccagatcctccgcagctccctaaatctgatccagcacagaagtcc
atgaaggagccagcgaaaactccagtggcttccatggatgctaataaagctggtgctggt
gaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaagggctt
gttgagcacgggcgtaactggacagccattgccaaaatggtgggcaccaaaagcgaggcg
cagtgcaagaacttctatttcaattacaagagacgtcacaacctggacaacctgctccag
cagcataagcaggatacgcgtcgggctcgtgctgataggtctcaaggcgaaggtctagcc
acagcatcacctgatgatgatgaggacaacgcagatgacagtgaaggtggcgacaacagc
tctgatacagagagtgccccctccccctctcaggctgactcctcaaagtcaggtgactcc
aagagggcggacagcgctgcaggggatgctcagtgctctgaccaggacaaaggtcaagcc
agcaatggcaagaccccagagcccgcatacggggaactctgtgtcaaggaggagaagagc
ccagagagcgagaccggatctcaggaggaaaaggcccgggtgtctgcctatacaggcgcg
gtacatcccaaaactgaacctcaggatgtggacatgaagaccggagaggttcaggttaag
atggagcctgagatcaaggagaaaggagagaagggagatcatggcgaaatgcacagggat
ctccattctgataatgactccagcgccacctgcagtgctgacgaggacgtggaagcggag
cctgaaagacagagaatattctccatggaaaagccttcactgctcaccccgccaggcacc
gtgctggtgtcctcacccaagcaaacccagctcaacatccagcagctccaacagagggca
gctgccatcccacccatggtgcctggtccctttggccctggtggtgtgcccatcagcggt
ttcgccatgttgcagcaccagatcaaagcggtgcatgagtctgcacaccaagaggagaag
cagaggcaggatcagggagatctggaccgcagaccccctttcaacacccgcagccccacc
gtgctggacagagatgtcctccaccctgcctccaaccagctggtcgggagtatgccagat
ggagtccgggtgacgttcagcagacccagtcgacctcccaacattccctctcctcctcca
ctcattccaaccaccaagcccacggacaagccctccttcatccaaggaggctccatctcc
cagggaactcctggcacatacctcccgccccacgctgtctatgggccagaggggactaag
agcaccgtgggctccatctctctgggtctgcctcggcagcaggatcccagcaaacctgga
gctgcagtttcgtcgatacaggatggcagaggcaacccggcgaaggtgggcgagggtatg
gctttcagaggatcaatcactcagggcactccagccctgccccagtccagcatcgctgct
gacctcctgaagggcacaatcacaaagctggccacagaggacctgagcatcccagacaag
gctagaggagatcagctgactaaaggtcatgtcatctatgaaggcaagagtggtcacatc
ctctcctttgatgctatcaagaacccgagggaaaacacccgcagccccagaacaggccat
gacatgaaacgcacttacgacatgatggaggggtccatgggcaggggacaccccggccgg
gagggagctcccttcgaagggttaattagcagagccttgcctagagagggtatccatgga
gattctaaggaaaggccattgatgaccggatccatcatgcaaggaacaccgagaaccgct
gcagagacttacgaagacgccatgaaatatgggaaacagataaagcgagagagtccaccg
atccggtccttcgaaggtggtattggcaaaggaaagccctatgagggagtgaataccatc
aaagagatgggacgctccattcacgaaatcccccggcaggatcagtccggccaggacatc
tgcaagacccccgacatgtcagaccggagggttatggagggcgccatatctcagattcac
cctctcaaccagccgactatcaagcacaatgtcaagtccctgatcaccagtccctctaag
cttcctcacagcatgccgcagctggaggccatggaacgagccaaatacgaggagagcaag
gcagtgcgccacacgtccgtggtcaactccaccacctctgtcctgcgctccacacaccag
gaggccagcaaatcccagcttagcccgggcatgtatgaggacgccaatgctcgcaggacc
cctgtcaactacagcaccaatcccgtatccagaggatcacctatgctgggacgtgctcca
gagggtggtatgagctctgcgaaatctgctgcacatgaaagaaagagtgccatgaccccg
acacagagggacagtgtcccagccaagtccccagtgtcaggtggtgaccctgtagcctct
cacagccccttcgacccccaccacaggcccgttgttcccggggaagtgtaccgaccccac
ctgcctccacatctcgaccccaccctggccttccacagagtgctggatcctgcgttcatg
ttctccaggcagccgtcccccacaaactaccacaacacctaccagctgtacaccatggag
aacacgcggcagaccatcctcaacgattatatcacttcccagcagatgcaagtcattcct
cggcccgacatggcccggggattgtcaccacgggaacagcccgtcgctatcccttacgca
gctggaacacgagggattattgatctagcccagatgcctccaactatcctgttgcctcac
cctgggggaacaggtactcccactttggaacgcatcgcctacctccctggagctcagccc
cctttccctcctagggctttcaacccaacctccatatcgccaggtcaccctgcccatctt
gctgctgccgctgccgccagtgcagagagggaacgggagagggagcgtgaccgcgagcac
caggagaaagagagggagaaggagagggagagggagcagcgggagagggaacgggaacga
gagagggagcgggagcgggaaatgcgagaacgagaacgagagcgggaccgggagcgagcc
aatgaatacatccgcggaggtggaccagagcagccaggccggccagggagtcgaggttat
ctgcactcaccttctccttcgctcaggacgcaggaagtagtggttcagcagcggccgagt
attttccagggaaagagtgtcatcacctctctaatgccccattcagcggcagcgacacca
gcggtacaaagtagctctcgctacggtactgccgctgatgctctggctgcgctggtggac
gctgcagcctcagccccacagatggatgtggccaaggtgaaggagagcaaacatgaacgg
gatgatgacatgtcttcatcagctgcagctcggcgagcagccagcctctccgaacagcag
caacaggaggcagaaagacgatccatgcagtcaccatatggtgctatgtctctgccagga
ggtaagccccatccagcttactctgagggccctggcgtcggggttaaggataagggacct
caaacctcaaagtcccgcatcgaagaggagcttcggactcgtggaaagacgactatcaca
gccgctagcttcattgatgtcatcatcacacggcagatagcctctgacaaagactcacga
gagcgaggctctcagagctctgactcctctagcagcttgtcatctagtcgatatgacaat
accggcggaggagccattgaggtgatcagtcctgctagttccccggtccaactgcaacag
gacaaaccagaagacggacagcaacaggcagcagctggcatgcgggcgtacgacatgagt
cgttaccgaccatcgggggagccatcccagcccagttcccagcagcccccgtcctcccag
gcagacagctactctcaggtccccaagactcaccgggtcatgaccttggcagaccacatt
tcgcatatcataacccaggactttgcccggaatcaggaccctccacccgtctcctcctca
gcttctgccacattccagagcgtggtgccctccgtgtcctcgtcaggtcgagccaaggtg
cccagccgctacagtcctgagaaccaggtccaggctctacaccaccagagaccctccagt
agagtttcaccagagaacgcccctgacaagcccagagccaggcctggtaagtctccagag
cgaggaggcaggccgatggagaactatgaacccatctctccaccgcagagctatcaaggc
atggacaaacaggaggctgccgggcctccaccccagaggcgagaggcggaaaactctgag
atcaggaatgactcaaggtctccagggagtgtcagctacctgccttccttcttcaccaag
cttgagaacacctcgccaatggtgaaatccaagaagcaggagatctttcgtaagttgaac
tccaactctggtgtcggtgattctgacgttggaaatgcacaaccaggcacggagatcttt
aacttgcctgctgttaccagctccagcagcatcaaccccaggaatcactcctttagtgat
ccagccagtaacctgggcctggaggacatcatccgcaaggctctgatgggcaacttggag
gagagacaggatgagcaccagggaggaataggggctcagtgtgccatcaacaacacacct
ggcgcaggcggtgatgcccgccaggaggccaacccatcacccagtatggggaagcagaag
cagagcaaagccaacagccggaaatccaagtcacctaacctgggtcaggcctacgctggt
ggggaacgtccctcttcagtgtcctccgtccactctgagggagattatcacagacaagcc
caagcccagccacagtggagttgggatgaccgaccctcatccacaggatccatgcagttc
ccttacaacccgctgaccatgcgcatactaagcagcacgccaccaacctccatagcctcc
ccctccatacagagccagcagcagcagcaacagcagcagcagcagccgcaaccgcctccg
gctggagccccggtggcccagcagcgcgtgtggcagtctctgctgtcagagcaatatgag
accctgtctgacagcgatgactga
DBGET
integrated database retrieval system
